RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 RMDN2Q96LZ7 410 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 CEP126Q9P2H0 1117 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 ATP8A1Q9Y2Q0 1164 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 MROH2AA6NES4 1674 aa8.64□□□□□ -1.03
COL4A5-205ENST00000483338 hCG_2014768A0A024R1R8 64 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 HNRNPRO43390 633 aaKnown RBP8.63□□□□□ -1.03
COL4A5-205ENST00000483338 FOXO3O43524 673 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 SUPT3HO75486 399 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 CCDC166P0CW27 439 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 ATP6V1C1P21283 382 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 DRD4P21917 467 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 SESN3P58005 492 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 GUCY1B3Q02153 619 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 KLC1Q07866 573 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 FAM133BQ5BKY9 247 aaKnown RBP8.63□□□□□ -1.03
COL4A5-205ENST00000483338 PPFIBP1Q86W92 1011 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 STAG2Q8N3U4 1231 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 TAF1DQ9H5J8 278 aaPredicted RBP8.63□□□□□ -1.03
COL4A5-205ENST00000483338 INIPQ9NRY2 104 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 HELLSQ9NRZ9 838 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 NFE2L3Q9Y4A8 694 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 CLIC4Q9Y696 253 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 MYO3AQ8NEV4 1616 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 ADAMTS13Q76LX8 1427 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 SPATA31D3P0C874 917 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 FECHP22830 423 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 CASP14P31944 242 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 FMR1Q06787 632 aaKnown RBP eCLIP8.63□□□□□ -1.03
COL4A5-205ENST00000483338 PAK2Q13177 524 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 P3H1Q32P28 736 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 SMUG1Q53HV7 270 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 OLFM4Q6UX06 510 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 SPATA31D4Q6ZUB0 917 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 CPLX4Q7Z7G2 160 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 MMGT1Q8N4V1 131 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 C1orf131Q8NDD1 294 aaKnown RBP8.63□□□□□ -1.03
COL4A5-205ENST00000483338 WHAMMQ8TF30 809 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 SWAP70Q9UH65 585 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 REXO2Q9Y3B8 237 aaKnown RBP8.63□□□□□ -1.03
COL4A5-205ENST00000483338 MROH7-TTC4A0A0A0MT08 1334 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 A0A1B0GTH6 734 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 USO1O60763 962 aaKnown RBP8.63□□□□□ -1.03
COL4A5-205ENST00000483338 KRT38O76015 456 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 FAM153BP0C7A2 387 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 MYL6BP14649 208 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 XBP1P17861 261 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 GNAZP19086 355 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 FXR1P51114 621 aaKnown RBP eCLIP8.63□□□□□ -1.03
COL4A5-205ENST00000483338 HDAC4P56524 1084 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 RRS1Q15050 365 aaKnown RBP8.63□□□□□ -1.03
COL4A5-205ENST00000483338 FAM153CQ494X1 144 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 RC3H1Q5TC82 1133 aaKnown RBP8.63□□□□□ -1.03
COL4A5-205ENST00000483338 SEPT14Q6ZU15 432 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 NLRP3Q96P20 1036 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 FAM153AQ9UHL3 310 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 TFR2Q9UP52 801 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 OVOS2A0A0G2JMS6 1433 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 OVOS2A0A0J9YW53 1432 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 OVOS2Q6IE36 1432 aa8.63□□□□□ -1.03
COL4A5-205ENST00000483338 F6X3S4 739 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 EIF3FO00303 357 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-205ENST00000483338 GNA14O95837 355 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 KRT16P08779 473 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 HOXD12P35452 270 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 KIF5AQ12840 1032 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 SEPT2Q15019 361 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 CCDC70Q6NSX1 233 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 CEP128Q6ZU80 1094 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 FOXP4Q8IVH2 680 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-205ENST00000483338 UCMAQ8WVF2 138 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 SAMSN1Q9NSI8 373 aaKnown RBP8.62□□□□□ -1.03
COL4A5-205ENST00000483338 NKX1-2Q9UD57 310 aaPredicted RBP8.62□□□□□ -1.03
COL4A5-205ENST00000483338 SYNPO2Q9UMS6 1093 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 ALKQ9UM73 1620 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 IGF2BP3O00425 579 aaKnown RBP eCLIP8.62□□□□□ -1.03
COL4A5-205ENST00000483338 IFIT3O14879 490 aaKnown RBP8.62□□□□□ -1.03
COL4A5-205ENST00000483338 NCALDP61601 193 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 ATP8B2P98198 1209 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 SF3A3Q12874 501 aaKnown RBP eCLIP8.62□□□□□ -1.03
COL4A5-205ENST00000483338 STK38Q15208 465 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 CHADLQ6NUI6 762 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 DUS1LQ6P1R4 473 aaKnown RBP8.62□□□□□ -1.03
COL4A5-205ENST00000483338 TRMT44Q8IYL2 757 aaKnown RBP8.62□□□□□ -1.03
COL4A5-205ENST00000483338 NSUN7Q8NE18 718 aaKnown RBP8.62□□□□□ -1.03
COL4A5-205ENST00000483338 RUBCNQ92622 972 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 MAP4K1Q92918 833 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 CLIP3Q96DZ5 547 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 ZMYM6O95789 1325 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 MYO5BQ9ULV0 1848 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 FAM83GA6ND36 823 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 GYPCP04921 128 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 SARSP49591 514 aaKnown RBP8.62□□□□□ -1.03
COL4A5-205ENST00000483338 MCL1Q07820 350 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 PPARAQ07869 468 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 CMPK2Q5EBM0 449 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 TCERG1LQ5VWI1 586 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 SESTD1Q86VW0 696 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 ARFGAP2Q8N6H7 521 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 CCDC197Q8NCU1 140 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 RUFY2Q8WXA3 655 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms