RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 SOWAHBA6NEL2 793 aa16.2■□□□□ 0.18
VARS-225ENST00000482996 NFIBO00712 420 aa16.2■□□□□ 0.18
VARS-225ENST00000482996 BAATQ14032 418 aaPredicted RBP16.2■□□□□ 0.18
VARS-225ENST00000482996 WTAPQ15007 396 aa16.2■□□□□ 0.18
VARS-225ENST00000482996 CDC37Q16543 378 aaPredicted RBP16.2■□□□□ 0.18
VARS-225ENST00000482996 STOX1Q6ZVD7 989 aa16.2■□□□□ 0.18
VARS-225ENST00000482996 ADGRF4Q8IZF3 695 aa16.2■□□□□ 0.18
VARS-225ENST00000482996 CPVLQ9H3G5 476 aa16.2■□□□□ 0.18
VARS-225ENST00000482996 TAF6LQ9Y6J9 622 aa16.2■□□□□ 0.18
VARS-225ENST00000482996 TRIOBPQ9H2D6 2365 aa16.19■□□□□ 0.18
VARS-225ENST00000482996 DUSP11O75319 330 aaKnown RBP16.19■□□□□ 0.18
VARS-225ENST00000482996 CDC45O75419 566 aa16.19■□□□□ 0.18
VARS-225ENST00000482996 PGK1P00558 417 aa16.19■□□□□ 0.18
VARS-225ENST00000482996 ATN1P54259 1190 aaPredicted RBP16.19■□□□□ 0.18
VARS-225ENST00000482996 LRRC26Q2I0M4 334 aa16.19■□□□□ 0.18
VARS-225ENST00000482996 TMEM67Q5HYA8 995 aa16.19■□□□□ 0.18
VARS-225ENST00000482996 CHRDL2Q6WN34 429 aa16.19■□□□□ 0.18
VARS-225ENST00000482996 SPC25Q9HBM1 224 aa16.19■□□□□ 0.18
VARS-225ENST00000482996 COLQQ9Y215 455 aaPredicted RBP16.19■□□□□ 0.18
VARS-225ENST00000482996 ALPK3Q96L96 1907 aa16.18■□□□□ 0.18
VARS-225ENST00000482996 LOC102724159A0A0B4J2E5 919 aa16.18■□□□□ 0.18
VARS-225ENST00000482996 SLC27A2O14975 620 aa16.18■□□□□ 0.18
VARS-225ENST00000482996 ADCYAP1R1P41586 468 aa16.18■□□□□ 0.18
VARS-225ENST00000482996 PWP2Q15269 919 aaKnown RBP16.18■□□□□ 0.18
VARS-225ENST00000482996 CCDC144BQ3MJ40 725 aa16.18■□□□□ 0.18
VARS-225ENST00000482996 USH1GQ495M9 461 aa16.18■□□□□ 0.18
VARS-225ENST00000482996 HABP4Q5JVS0 413 aaKnown RBP16.18■□□□□ 0.18
VARS-225ENST00000482996 RNF20Q5VTR2 975 aa16.18■□□□□ 0.18
VARS-225ENST00000482996 RNF207Q6ZRF8 634 aa16.18■□□□□ 0.18
VARS-225ENST00000482996 CHST3Q7LGC8 479 aa16.18■□□□□ 0.18
VARS-225ENST00000482996 CATIPQ7Z7H3 387 aa16.18■□□□□ 0.18
VARS-225ENST00000482996 MB21D2Q8IYB1 491 aaPredicted RBP16.18■□□□□ 0.18
VARS-225ENST00000482996 CLEC4DQ8WXI8 215 aa16.18■□□□□ 0.18
VARS-225ENST00000482996 VAT1LQ9HCJ6 419 aa16.18■□□□□ 0.18
VARS-225ENST00000482996 ZMYND8Q9ULU4 1186 aaPredicted RBP16.18■□□□□ 0.18
VARS-225ENST00000482996 ABCB11O95342 1321 aa16.18■□□□□ 0.18
VARS-225ENST00000482996 MCM3APO60318 1980 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 KLRF2D3W0D1 207 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 CALML3P27482 149 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 MCM5P33992 734 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 QRICH1Q2TAL8 776 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 CREB3L3Q68CJ9 461 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 FBXO11Q86XK2 927 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 STAG2Q8N3U4 1231 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 RGS22Q8NE09 1264 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 LENG1Q96BZ8 264 aaPredicted RBP16.17■□□□□ 0.18
VARS-225ENST00000482996 MPHOSPH6Q99547 160 aaKnown RBP16.17■□□□□ 0.18
VARS-225ENST00000482996 MTA3Q9BTC8 594 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 MAF1Q9H063 256 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 JMJD4Q9H9V9 463 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 PHF24Q9UPV7 400 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 DNAH12Q6ZR08 3092 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 SYNRGQ9UMZ2 1314 aa16.17■□□□□ 0.18
VARS-225ENST00000482996 PALM3A6NDB9 673 aaPredicted RBP16.16■□□□□ 0.18
VARS-225ENST00000482996 B4DLN1 442 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 PRC1O43663 620 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 ADAMTS4O75173 837 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 MRPL12P52815 198 aaKnown RBP16.16■□□□□ 0.18
VARS-225ENST00000482996 ANTXR2P58335 489 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 RTP1P59025 263 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 RPS6P62753 249 aaKnown RBP16.16■□□□□ 0.18
VARS-225ENST00000482996 GRM4Q14833 912 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 NECTIN1Q15223 517 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 SLC30A10Q6XR72 485 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 NOL8Q76FK4 1167 aaKnown RBP16.16■□□□□ 0.18
VARS-225ENST00000482996 MCF2L2Q86YR7 1114 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 IGDCC4Q8TDY8 1250 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 FERMT2Q96AC1 680 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 TSEN34Q9BSV6 310 aaKnown RBP16.16■□□□□ 0.18
VARS-225ENST00000482996 KATNBL1Q9H079 304 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 VTA1Q9NP79 307 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 MAD2L2Q9UI95 211 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 MRPL11Q9Y3B7 192 aaKnown RBP16.16■□□□□ 0.18
VARS-225ENST00000482996 ASTN1O14525 1302 aa16.16■□□□□ 0.18
VARS-225ENST00000482996 C6orf222P0C671 652 aaPredicted RBP16.15■□□□□ 0.18
VARS-225ENST00000482996 SYN1P17600 705 aa16.15■□□□□ 0.18
VARS-225ENST00000482996 ALDH5A1P51649 535 aaPredicted RBP16.15■□□□□ 0.18
VARS-225ENST00000482996 TNFAIP2Q03169 654 aa16.15■□□□□ 0.18
VARS-225ENST00000482996 TRAF1Q13077 416 aa16.15■□□□□ 0.18
VARS-225ENST00000482996 SLC39A5Q6ZMH5 540 aa16.15■□□□□ 0.18
VARS-225ENST00000482996 TMTC2Q8N394 836 aa16.15■□□□□ 0.18
VARS-225ENST00000482996 DNERQ8NFT8 737 aa16.15■□□□□ 0.18
VARS-225ENST00000482996 MORC4Q8TE76 937 aa16.15■□□□□ 0.18
VARS-225ENST00000482996 TMEM87BQ96K49 555 aa16.15■□□□□ 0.18
VARS-225ENST00000482996 PURBQ96QR8 312 aaKnown RBP16.15■□□□□ 0.18
VARS-225ENST00000482996 AMNQ9BXJ7 453 aa16.15■□□□□ 0.18
VARS-225ENST00000482996 SENP2Q9HC62 589 aa16.15■□□□□ 0.18
VARS-225ENST00000482996 ATP11BQ9Y2G3 1177 aa16.15■□□□□ 0.18
VARS-225ENST00000482996 MOXD2PA6NHM9 499 aa16.14■□□□□ 0.17
VARS-225ENST00000482996 ZBTB5O15062 677 aa16.14■□□□□ 0.17
VARS-225ENST00000482996 GJA9P57773 515 aa16.14■□□□□ 0.17
VARS-225ENST00000482996 TROAPQ12815 778 aa16.14■□□□□ 0.17
VARS-225ENST00000482996 IQSEC1Q6DN90 963 aa16.14■□□□□ 0.17
VARS-225ENST00000482996 NFXL1Q6ZNB6 911 aa16.14■□□□□ 0.17
VARS-225ENST00000482996 EEPD1Q7L9B9 569 aa16.14■□□□□ 0.17
VARS-225ENST00000482996 FBXO16Q8IX29 292 aaPredicted RBP16.14■□□□□ 0.17
VARS-225ENST00000482996 PCSK9Q8NBP7 692 aaKnown RBP16.14■□□□□ 0.17
VARS-225ENST00000482996 KLHDC9Q8NEP7 349 aa16.14■□□□□ 0.17
VARS-225ENST00000482996 NUP133Q8WUM0 1156 aa16.14■□□□□ 0.17
VARS-225ENST00000482996 UPF3AQ9H1J1 476 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms