RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 ZNF765Q7L2R6 523 aa4.98□□□□□ -1.61
CLCC1-209ENST00000482889 TMC3Q7Z5M5 1100 aa4.98□□□□□ -1.61
CLCC1-209ENST00000482889 ATL2Q8NHH9 583 aa4.98□□□□□ -1.61
CLCC1-209ENST00000482889 POLR3GLQ9BT43 218 aa4.98□□□□□ -1.61
CLCC1-209ENST00000482889 SSU72Q9NP77 194 aaKnown RBP4.98□□□□□ -1.61
CLCC1-209ENST00000482889 GFOD1Q9NXC2 390 aa4.98□□□□□ -1.61
CLCC1-209ENST00000482889 MAGEC2Q9UBF1 373 aaPredicted RBP4.98□□□□□ -1.61
CLCC1-209ENST00000482889 TMEFF2Q9UIK5 374 aaPredicted RBP4.98□□□□□ -1.61
CLCC1-209ENST00000482889 FBXL21Q9UKT6 434 aa4.98□□□□□ -1.61
CLCC1-209ENST00000482889 PCDHA9Q9Y5H5 950 aa4.98□□□□□ -1.61
CLCC1-209ENST00000482889 TCRBV16S1A1N1A0A5B0 115 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 KPNA6O60684 536 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 LEFTY1O75610 366 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 POU3F2P20265 443 aaPredicted RBP4.97□□□□□ -1.61
CLCC1-209ENST00000482889 ECI1P42126 302 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 MCL1Q07820 350 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 CDK5R2Q13319 367 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 NFE2Q16621 373 aaPredicted RBP4.97□□□□□ -1.61
CLCC1-209ENST00000482889 DPY19L1Q2PZI1 675 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 CCDC181Q5TID7 509 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 DDX46Q7L014 1031 aaKnown RBP4.97□□□□□ -1.61
CLCC1-209ENST00000482889 FAM214BQ7L5A3 538 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 CERS3Q8IU89 383 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 MFSD2AQ8NA29 543 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 COG1Q8WTW3 980 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 Q96M66 194 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 FBXL18Q96ME1 805 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 GBP3Q9H0R5 595 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 MKNK2Q9HBH9 465 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 INTS7Q9NVH2 962 aaKnown RBP4.97□□□□□ -1.61
CLCC1-209ENST00000482889 SFMBT1Q9UHJ3 866 aa4.97□□□□□ -1.61
CLCC1-209ENST00000482889 GPR55Q9Y2T6 319 aaPredicted RBP4.97□□□□□ -1.61
CLCC1-209ENST00000482889 A0A087WZG4 1122 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 SHTN1A0MZ66 631 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 H0Y8X5 98 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 NOP56O00567 594 aaKnown RBP4.96□□□□□ -1.62
CLCC1-209ENST00000482889 OPA1O60313 960 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 MSCO60682 206 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 CRTAMO95727 393 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 FAM87AP0C7U9 286 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 JMJD7P0C870 316 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 NAT2P11245 290 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 ITGA4P13612 1032 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 CTSKP43235 329 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 NEK4P51957 841 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 STAT4Q14765 748 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 CDCA2Q69YH5 1023 aaPredicted RBP4.96□□□□□ -1.62
CLCC1-209ENST00000482889 NXPE1Q8N323 547 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 FIBCD1Q8N539 461 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 SYTL5Q8TDW5 730 aaPredicted RBP4.96□□□□□ -1.62
CLCC1-209ENST00000482889 ZDHHC15Q96MV8 337 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 IPO9Q96P70 1041 aaKnown RBP4.96□□□□□ -1.62
CLCC1-209ENST00000482889 DUSP23Q9BVJ7 150 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 NKX2-4Q9H2Z4 354 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 GPRC5CQ9NQ84 441 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 BSDC1Q9NW68 430 aaPredicted RBP4.96□□□□□ -1.62
CLCC1-209ENST00000482889 MCM8Q9UJA3 840 aa4.96□□□□□ -1.62
CLCC1-209ENST00000482889 SHISA3A0PJX4 238 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 ZNF891A8MT65 544 aaPredicted RBP4.95□□□□□ -1.62
CLCC1-209ENST00000482889 ALG1L2C9J202 215 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 M0R2C6 588 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 MEIS1O00470 390 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 NEMP1O14524 444 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 TSPAN6O43657 245 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 WNT11O96014 354 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 SCG5P05408 212 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 SNRPB2P08579 225 aaKnown RBP4.95□□□□□ -1.62
CLCC1-209ENST00000482889 PMLP29590 882 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 KCNJ6P48051 423 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 RAB27AP51159 221 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 GABREP78334 506 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 HSP90AB2PQ58FF8 381 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 USP53Q70EK8 1073 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 VSIG10LQ86VR7 867 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 RNF141Q8WVD5 230 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 PRDM10Q9NQV6 1147 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 SLC5A4Q9NY91 659 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 ZC3H7BQ9UGR2 993 aaKnown RBP4.95□□□□□ -1.62
CLCC1-209ENST00000482889 PCDHB12Q9Y5F1 795 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 PCDHA8Q9Y5H6 950 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 FHOD1Q9Y613 1164 aa4.95□□□□□ -1.62
CLCC1-209ENST00000482889 ARID4BQ4LE39 1312 aaPredicted RBP4.95□□□□□ -1.62
CLCC1-209ENST00000482889 CCDC194A0A1B0GVG4 234 aa4.94□□□□□ -1.62
CLCC1-209ENST00000482889 WASH4PA8MWX3 477 aa4.94□□□□□ -1.62
CLCC1-209ENST00000482889 PRR33A8MZF0 331 aa4.94□□□□□ -1.62
CLCC1-209ENST00000482889 IGF2BP3O00425 579 aaKnown RBP eCLIP4.94□□□□□ -1.62
CLCC1-209ENST00000482889 GPR39O43194 453 aa4.94□□□□□ -1.62
CLCC1-209ENST00000482889 PRPF3O43395 683 aaKnown RBP4.94□□□□□ -1.62
CLCC1-209ENST00000482889 ADAMTS4O75173 837 aa4.94□□□□□ -1.62
CLCC1-209ENST00000482889 PEX14O75381 377 aa4.94□□□□□ -1.62
CLCC1-209ENST00000482889 ASLP04424 464 aa4.94□□□□□ -1.62
CLCC1-209ENST00000482889 LCP1P13796 627 aa4.94□□□□□ -1.62
CLCC1-209ENST00000482889 HOXC12P31275 282 aa4.94□□□□□ -1.62
CLCC1-209ENST00000482889 GP2P55259 537 aaKnown RBP4.94□□□□□ -1.62
CLCC1-209ENST00000482889 SCRN1Q12765 414 aa4.94□□□□□ -1.62
CLCC1-209ENST00000482889 MAP4K2Q12851 820 aa4.94□□□□□ -1.62
CLCC1-209ENST00000482889 NOL9Q5SY16 702 aaKnown RBP4.94□□□□□ -1.62
CLCC1-209ENST00000482889 C14orf80Q86SX3 495 aa4.94□□□□□ -1.62
CLCC1-209ENST00000482889 CCDC103Q8IW40 242 aa4.94□□□□□ -1.62
CLCC1-209ENST00000482889 TOP6BLQ8N6T0 577 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms