RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 MAP3K21Q5TCX8 1036 aa24.29■■□□□ 1.48
SEC13-217ENST00000482647 MICU3Q86XE3 530 aa24.29■■□□□ 1.48
SEC13-217ENST00000482647 FBXO11Q86XK2 927 aa24.29■■□□□ 1.48
SEC13-217ENST00000482647 CCDC144CPQ8IYA2 1237 aa24.29■■□□□ 1.48
SEC13-217ENST00000482647 BRPF3Q9ULD4 1205 aa24.29■■□□□ 1.48
SEC13-217ENST00000482647 RPTORQ8N122 1335 aa24.29■■□□□ 1.48
SEC13-217ENST00000482647 KLF18A0A0U1RQI7 1052 aa24.28■■□□□ 1.48
SEC13-217ENST00000482647 TAL1P17542 331 aaPredicted RBP24.28■■□□□ 1.48
SEC13-217ENST00000482647 CACNB2Q08289 660 aaPredicted RBP24.28■■□□□ 1.48
SEC13-217ENST00000482647 TRAF1Q13077 416 aa24.28■■□□□ 1.48
SEC13-217ENST00000482647 NSMFQ6X4W1 530 aa24.28■■□□□ 1.48
SEC13-217ENST00000482647 RAB11FIP4Q86YS3 637 aa24.28■■□□□ 1.48
SEC13-217ENST00000482647 CLEC4DQ8WXI8 215 aa24.28■■□□□ 1.48
SEC13-217ENST00000482647 BRF1Q92994 677 aa24.28■■□□□ 1.48
SEC13-217ENST00000482647 AMNQ9BXJ7 453 aa24.28■■□□□ 1.48
SEC13-217ENST00000482647 HMX1Q9NP08 348 aaPredicted RBP24.28■■□□□ 1.48
SEC13-217ENST00000482647 ABCB11O95342 1321 aa24.28■■□□□ 1.48
SEC13-217ENST00000482647 POTEB2H3BUK9 544 aa24.27■■□□□ 1.48
SEC13-217ENST00000482647 CYTH3O43739 400 aa24.27■■□□□ 1.48
SEC13-217ENST00000482647 IGHA2P01877 340 aa24.27■■□□□ 1.48
SEC13-217ENST00000482647 CYP2C19P33261 490 aa24.27■■□□□ 1.48
SEC13-217ENST00000482647 SLC35G1Q2M3R5 365 aa24.27■■□□□ 1.48
SEC13-217ENST00000482647 HOMER1Q86YM7 354 aa24.27■■□□□ 1.48
SEC13-217ENST00000482647 MSL3Q8N5Y2 521 aaKnown RBP24.27■■□□□ 1.48
SEC13-217ENST00000482647 PIGSQ96S52 555 aa24.27■■□□□ 1.48
SEC13-217ENST00000482647 SPZ1Q9BXG8 430 aa24.27■■□□□ 1.48
SEC13-217ENST00000482647 RBM28Q9NW13 759 aaKnown RBP24.27■■□□□ 1.48
SEC13-217ENST00000482647 CYP39A1Q9NYL5 469 aa24.27■■□□□ 1.48
SEC13-217ENST00000482647 NAP1L2Q9ULW6 460 aaPredicted RBP24.27■■□□□ 1.48
SEC13-217ENST00000482647 ZNF236Q9UL36 1845 aa24.26■■□□□ 1.47
SEC13-217ENST00000482647 PNMA6FA0A0J9YX94 578 aa24.26■■□□□ 1.47
SEC13-217ENST00000482647 NFIBO00712 420 aa24.26■■□□□ 1.47
SEC13-217ENST00000482647 GJB1P08034 283 aa24.26■■□□□ 1.47
SEC13-217ENST00000482647 RCAN1P53805 252 aa24.26■■□□□ 1.47
SEC13-217ENST00000482647 ZNF467Q7Z7K2 595 aaPredicted RBP24.26■■□□□ 1.47
SEC13-217ENST00000482647 RGS22Q8NE09 1264 aa24.26■■□□□ 1.47
SEC13-217ENST00000482647 TINF2Q9BSI4 451 aa24.26■■□□□ 1.47
SEC13-217ENST00000482647 AGXT2Q9BYV1 514 aa24.26■■□□□ 1.47
SEC13-217ENST00000482647 UPF3BQ9BZI7 483 aaKnown RBP24.26■■□□□ 1.47
SEC13-217ENST00000482647 MRPL11Q9Y3B7 192 aaKnown RBP24.26■■□□□ 1.47
SEC13-217ENST00000482647 PLEKHA8P1O95397 391 aa24.25■■□□□ 1.47
SEC13-217ENST00000482647 APOBRQ0VD83 1088 aa24.25■■□□□ 1.47
SEC13-217ENST00000482647 PPP2R5BQ15173 497 aa24.25■■□□□ 1.47
SEC13-217ENST00000482647 RTN1Q16799 776 aa24.25■■□□□ 1.47
SEC13-217ENST00000482647 RNF207Q6ZRF8 634 aa24.25■■□□□ 1.47
SEC13-217ENST00000482647 TMTC3Q6ZXV5 915 aa24.25■■□□□ 1.47
SEC13-217ENST00000482647 SRBD1Q8N5C6 995 aaKnown RBP24.25■■□□□ 1.47
SEC13-217ENST00000482647 FAM133AQ8N9E0 248 aa24.25■■□□□ 1.47
SEC13-217ENST00000482647 RRP36Q96EU6 259 aaKnown RBP24.25■■□□□ 1.47
SEC13-217ENST00000482647 MAF1Q9H063 256 aa24.25■■□□□ 1.47
SEC13-217ENST00000482647 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.25■■□□□ 1.471e-7■■□□□ 12.5
SEC13-217ENST00000482647 PAK6Q9NQU5 681 aaPredicted RBP24.25■■□□□ 1.47
SEC13-217ENST00000482647 PCDHA1Q9Y5I3 950 aa24.25■■□□□ 1.47
SEC13-217ENST00000482647 PTPDC1A2A3K4 754 aa24.24■■□□□ 1.47
SEC13-217ENST00000482647 POTEFA5A3E0 1075 aa24.24■■□□□ 1.47
SEC13-217ENST00000482647 BAATQ14032 418 aaPredicted RBP24.24■■□□□ 1.47
SEC13-217ENST00000482647 MCF2L2Q86YR7 1114 aa24.24■■□□□ 1.47
SEC13-217ENST00000482647 PDRG1Q9NUG6 133 aa24.24■■□□□ 1.47
SEC13-217ENST00000482647 BRCA2P51587 3418 aa24.24■■□□□ 1.47
SEC13-217ENST00000482647 GOLGA8AA7E2F4 631 aa24.23■■□□□ 1.47
SEC13-217ENST00000482647 GOLGA8BA8MQT2 603 aa24.23■■□□□ 1.47
SEC13-217ENST00000482647 CNTN2Q02246 1040 aa24.23■■□□□ 1.47
SEC13-217ENST00000482647 MAMDC4Q6UXC1 1216 aa24.23■■□□□ 1.47
SEC13-217ENST00000482647 CMTR1Q8N1G2 835 aaKnown RBP24.23■■□□□ 1.47
SEC13-217ENST00000482647 PIBF1Q8WXW3 757 aa24.23■■□□□ 1.47
SEC13-217ENST00000482647 IL17RAQ96F46 866 aa24.23■■□□□ 1.47
SEC13-217ENST00000482647 DEFB118Q96PH6 123 aa24.23■■□□□ 1.47
SEC13-217ENST00000482647 SEC63Q9UGP8 760 aaKnown RBP24.23■■□□□ 1.47
SEC13-217ENST00000482647 NRBP1Q9UHY1 535 aa24.23■■□□□ 1.47
SEC13-217ENST00000482647 SYNGAP1Q96PV0 1343 aa24.22■■□□□ 1.47
SEC13-217ENST00000482647 CCDC196A0A1B0GTZ2 297 aa24.22■■□□□ 1.47
SEC13-217ENST00000482647 PPP1R11O60927 126 aaPredicted RBP24.22■■□□□ 1.47
SEC13-217ENST00000482647 CAPN2P17655 700 aa24.22■■□□□ 1.47
SEC13-217ENST00000482647 GJA8P48165 433 aa24.22■■□□□ 1.47
SEC13-217ENST00000482647 EVCP57679 992 aa24.22■■□□□ 1.47
SEC13-217ENST00000482647 CCDC82Q8N4S0 544 aa24.22■■□□□ 1.47
SEC13-217ENST00000482647 CNPY2Q9Y2B0 182 aa24.22■■□□□ 1.47
SEC13-217ENST00000482647 SOWAHBA6NEL2 793 aa24.21■■□□□ 1.47
SEC13-217ENST00000482647 SGPL1O95470 568 aa24.21■■□□□ 1.47
SEC13-217ENST00000482647 EN2P19622 333 aaPredicted RBP24.21■■□□□ 1.47
SEC13-217ENST00000482647 CALML3P27482 149 aa24.21■■□□□ 1.47
SEC13-217ENST00000482647 CCND3P30281 292 aaPredicted RBP24.21■■□□□ 1.47
SEC13-217ENST00000482647 METAP2P50579 478 aaKnown RBP eCLIP24.21■■□□□ 1.474e-7■■□□□ 11.9
SEC13-217ENST00000482647 RPS6P62753 249 aaKnown RBP24.21■■□□□ 1.47
SEC13-217ENST00000482647 TOB2Q14106 344 aaPredicted RBP24.21■■□□□ 1.47
SEC13-217ENST00000482647 U2AF1L4Q8WU68 220 aaKnown RBP24.21■■□□□ 1.47
SEC13-217ENST00000482647 ADD3Q9UEY8 706 aaKnown RBP24.21■■□□□ 1.47
SEC13-217ENST00000482647 ASB14A6NK59 587 aa24.2■■□□□ 1.46
SEC13-217ENST00000482647 CYBAP13498 195 aa24.2■■□□□ 1.46
SEC13-217ENST00000482647 CNGA1P29973 690 aa24.2■■□□□ 1.46
SEC13-217ENST00000482647 PRAMEF19Q5SWL8 479 aa24.2■■□□□ 1.46
SEC13-217ENST00000482647 TRPV1Q8NER1 839 aa24.2■■□□□ 1.46
SEC13-217ENST00000482647 FGD4Q96M96 766 aa24.2■■□□□ 1.46
SEC13-217ENST00000482647 TFRCP02786 760 aaKnown RBP24.19■■□□□ 1.46
SEC13-217ENST00000482647 SLC30A10Q6XR72 485 aa24.19■■□□□ 1.46
SEC13-217ENST00000482647 ALDH8A1Q9H2A2 487 aaPredicted RBP24.19■■□□□ 1.46
SEC13-217ENST00000482647 FAM217BQ9NTX9 383 aaPredicted RBP24.19■■□□□ 1.46
SEC13-217ENST00000482647 KIAA0100Q14667 2235 aaKnown RBP24.19■■□□□ 1.46
SEC13-217ENST00000482647 MSCO60682 206 aa24.18■■□□□ 1.46
SEC13-217ENST00000482647 SNAI1O95863 264 aaPredicted RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms