RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 KBTBD13C9JR72 458 aa19.33■□□□□ 0.68
VAMP4-204ENST00000482519 DNM1LO00429 736 aa19.33■□□□□ 0.68
VAMP4-204ENST00000482519 NFIBO00712 420 aa19.33■□□□□ 0.68
VAMP4-204ENST00000482519 SLC27A2O14975 620 aa19.33■□□□□ 0.68
VAMP4-204ENST00000482519 CENPBP07199 599 aaPredicted RBP19.33■□□□□ 0.68
VAMP4-204ENST00000482519 COL6A1P12109 1028 aa19.33■□□□□ 0.68
VAMP4-204ENST00000482519 AKR1A1P14550 325 aa19.33■□□□□ 0.68
VAMP4-204ENST00000482519 ACVR2BQ13705 512 aa19.33■□□□□ 0.68
VAMP4-204ENST00000482519 BAATQ14032 418 aaPredicted RBP19.33■□□□□ 0.68
VAMP4-204ENST00000482519 CDC37Q16543 378 aaPredicted RBP19.33■□□□□ 0.68
VAMP4-204ENST00000482519 CREB3L3Q68CJ9 461 aa19.33■□□□□ 0.68
VAMP4-204ENST00000482519 STAG2Q8N3U4 1231 aa19.33■□□□□ 0.68
VAMP4-204ENST00000482519 PNMA2Q9UL42 364 aa19.33■□□□□ 0.68
VAMP4-204ENST00000482519 FAM184BQ9ULE4 1060 aa19.33■□□□□ 0.68
VAMP4-204ENST00000482519 DDX49Q9Y6V7 483 aaKnown RBP19.33■□□□□ 0.68
VAMP4-204ENST00000482519 ALPK3Q96L96 1907 aa19.32■□□□□ 0.68
VAMP4-204ENST00000482519 PGK1P00558 417 aa19.32■□□□□ 0.68
VAMP4-204ENST00000482519 CALML3P27482 149 aa19.32■□□□□ 0.68
VAMP4-204ENST00000482519 ATN1P54259 1190 aaPredicted RBP19.32■□□□□ 0.68
VAMP4-204ENST00000482519 MB21D2Q8IYB1 491 aaPredicted RBP19.32■□□□□ 0.68
VAMP4-204ENST00000482519 ABHD16BQ9H3Z7 469 aa19.32■□□□□ 0.68
VAMP4-204ENST00000482519 ASB14A6NK59 587 aa19.31■□□□□ 0.68
VAMP4-204ENST00000482519 KLRF2D3W0D1 207 aa19.31■□□□□ 0.68
VAMP4-204ENST00000482519 ANTXR2P58335 489 aa19.31■□□□□ 0.68
VAMP4-204ENST00000482519 LRRC41Q15345 812 aa19.31■□□□□ 0.68
VAMP4-204ENST00000482519 RNF207Q6ZRF8 634 aa19.31■□□□□ 0.68
VAMP4-204ENST00000482519 CATIPQ7Z7H3 387 aa19.31■□□□□ 0.68
VAMP4-204ENST00000482519 CLEC4DQ8WXI8 215 aa19.31■□□□□ 0.68
VAMP4-204ENST00000482519 FERMT2Q96AC1 680 aa19.31■□□□□ 0.68
VAMP4-204ENST00000482519 WDR19Q8NEZ3 1342 aa19.3■□□□□ 0.68
VAMP4-204ENST00000482519 PRC1O43663 620 aa19.3■□□□□ 0.68
VAMP4-204ENST00000482519 NECTIN1Q15223 517 aa19.3■□□□□ 0.68
VAMP4-204ENST00000482519 LRRC26Q2I0M4 334 aa19.3■□□□□ 0.68
VAMP4-204ENST00000482519 QRICH1Q2TAL8 776 aa19.3■□□□□ 0.68
VAMP4-204ENST00000482519 CCDC144BQ3MJ40 725 aa19.3■□□□□ 0.68
VAMP4-204ENST00000482519 SLC30A10Q6XR72 485 aa19.3■□□□□ 0.68
VAMP4-204ENST00000482519 NOL8Q76FK4 1167 aaKnown RBP19.3■□□□□ 0.68
VAMP4-204ENST00000482519 EEPD1Q7L9B9 569 aa19.3■□□□□ 0.68
VAMP4-204ENST00000482519 NUP133Q8WUM0 1156 aa19.3■□□□□ 0.68
VAMP4-204ENST00000482519 JMJD4Q9H9V9 463 aa19.3■□□□□ 0.68
VAMP4-204ENST00000482519 MAD2L2Q9UI95 211 aa19.3■□□□□ 0.68
VAMP4-204ENST00000482519 ZMYND8Q9ULU4 1186 aaPredicted RBP19.3■□□□□ 0.68
VAMP4-204ENST00000482519 MYH6P13533 1939 aa19.29■□□□□ 0.68
VAMP4-204ENST00000482519 ASTN1O14525 1302 aa19.29■□□□□ 0.68
VAMP4-204ENST00000482519 MCM5P33992 734 aa19.29■□□□□ 0.68
VAMP4-204ENST00000482519 ADCYAP1R1P41586 468 aa19.29■□□□□ 0.68
VAMP4-204ENST00000482519 RNF20Q5VTR2 975 aa19.29■□□□□ 0.68
VAMP4-204ENST00000482519 CHRDL2Q6WN34 429 aa19.29■□□□□ 0.68
VAMP4-204ENST00000482519 NFXL1Q6ZNB6 911 aa19.29■□□□□ 0.68
VAMP4-204ENST00000482519 RNF180Q86T96 592 aa19.29■□□□□ 0.68
VAMP4-204ENST00000482519 IGDCC4Q8TDY8 1250 aa19.29■□□□□ 0.68
VAMP4-204ENST00000482519 GPHNQ9NQX3 736 aaPredicted RBP19.29■□□□□ 0.68
VAMP4-204ENST00000482519 PPP4R2Q9NY27 417 aa19.29■□□□□ 0.68
VAMP4-204ENST00000482519 ADD3Q9UEY8 706 aaKnown RBP19.29■□□□□ 0.68
VAMP4-204ENST00000482519 COLQQ9Y215 455 aaPredicted RBP19.29■□□□□ 0.68
VAMP4-204ENST00000482519 PALM3A6NDB9 673 aaPredicted RBP19.28■□□□□ 0.68
VAMP4-204ENST00000482519 SYN1P17600 705 aa19.28■□□□□ 0.68
VAMP4-204ENST00000482519 GRM4Q14833 912 aa19.28■□□□□ 0.68
VAMP4-204ENST00000482519 FBXO11Q86XK2 927 aa19.28■□□□□ 0.68
VAMP4-204ENST00000482519 ABCB11O95342 1321 aa19.27■□□□□ 0.68
VAMP4-204ENST00000482519 SYNRGQ9UMZ2 1314 aa19.27■□□□□ 0.68
VAMP4-204ENST00000482519 RPS6P62753 249 aaKnown RBP19.27■□□□□ 0.68
VAMP4-204ENST00000482519 COL9A3Q14050 684 aaPredicted RBP19.27■□□□□ 0.68
VAMP4-204ENST00000482519 HOMER1Q86YM7 354 aa19.27■□□□□ 0.68
VAMP4-204ENST00000482519 FBXO16Q8IX29 292 aaPredicted RBP19.27■□□□□ 0.68
VAMP4-204ENST00000482519 MYL10Q9BUA6 226 aa19.27■□□□□ 0.68
VAMP4-204ENST00000482519 LY9Q9HBG7 655 aa19.27■□□□□ 0.68
VAMP4-204ENST00000482519 LCTP09848 1927 aa19.27■□□□□ 0.67
VAMP4-204ENST00000482519 CCDC69A6NI79 296 aa19.26■□□□□ 0.67
VAMP4-204ENST00000482519 ADCY6O43306 1168 aa19.26■□□□□ 0.67
VAMP4-204ENST00000482519 DUSP11O75319 330 aaKnown RBP19.26■□□□□ 0.67
VAMP4-204ENST00000482519 ALDH5A1P51649 535 aaPredicted RBP19.26■□□□□ 0.67
VAMP4-204ENST00000482519 TNFAIP2Q03169 654 aa19.26■□□□□ 0.67
VAMP4-204ENST00000482519 TROAPQ12815 778 aa19.26■□□□□ 0.67
VAMP4-204ENST00000482519 TBC1D5Q92609 795 aa19.26■□□□□ 0.67
VAMP4-204ENST00000482519 AMNQ9BXJ7 453 aa19.26■□□□□ 0.67
VAMP4-204ENST00000482519 LRRC2Q9BYS8 371 aa19.26■□□□□ 0.67
VAMP4-204ENST00000482519 KATNBL1Q9H079 304 aa19.26■□□□□ 0.67
VAMP4-204ENST00000482519 DNAH12Q6ZR08 3092 aa19.25■□□□□ 0.67
VAMP4-204ENST00000482519 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.25■□□□□ 0.67
VAMP4-204ENST00000482519 C6orf222P0C671 652 aaPredicted RBP19.25■□□□□ 0.67
VAMP4-204ENST00000482519 SLC39A5Q6ZMH5 540 aa19.25■□□□□ 0.67
VAMP4-204ENST00000482519 ZNF654Q8IZM8 581 aa19.25■□□□□ 0.67
VAMP4-204ENST00000482519 PIBF1Q8WXW3 757 aa19.25■□□□□ 0.67
VAMP4-204ENST00000482519 TMEM87BQ96K49 555 aa19.25■□□□□ 0.67
VAMP4-204ENST00000482519 MPHOSPH6Q99547 160 aaKnown RBP19.25■□□□□ 0.67
VAMP4-204ENST00000482519 SPC25Q9HBM1 224 aa19.25■□□□□ 0.67
VAMP4-204ENST00000482519 PDGFCQ9NRA1 345 aa19.25■□□□□ 0.67
VAMP4-204ENST00000482519 PCDH10Q9P2E7 1040 aa19.25■□□□□ 0.67
VAMP4-204ENST00000482519 ATP11BQ9Y2G3 1177 aa19.25■□□□□ 0.67
VAMP4-204ENST00000482519 MRPL11Q9Y3B7 192 aaKnown RBP19.25■□□□□ 0.67
VAMP4-204ENST00000482519 BAZ2BQ9UIF8 2168 aaKnown RBP19.25■□□□□ 0.67
VAMP4-204ENST00000482519 MYADML2A6NDP7 307 aa19.24■□□□□ 0.67
VAMP4-204ENST00000482519 SH2B2O14492 632 aaPredicted RBP19.24■□□□□ 0.67
VAMP4-204ENST00000482519 ZBTB5O15062 677 aa19.24■□□□□ 0.67
VAMP4-204ENST00000482519 ADAMTS4O75173 837 aa19.24■□□□□ 0.67
VAMP4-204ENST00000482519 RTP1P59025 263 aa19.24■□□□□ 0.67
VAMP4-204ENST00000482519 IRX5P78411 483 aaPredicted RBP19.24■□□□□ 0.67
VAMP4-204ENST00000482519 PDE4DQ08499 809 aa19.24■□□□□ 0.67
VAMP4-204ENST00000482519 KCNA10Q16322 511 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms