RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 HDAC7Q8WUI4 952 aa15.99■□□□□ 0.15
CCDC78-211ENST00000481804 RRP36Q96EU6 259 aaKnown RBP15.99■□□□□ 0.15
CCDC78-211ENST00000481804 MMRN2Q9H8L6 949 aa15.99■□□□□ 0.15
CCDC78-211ENST00000481804 MLXIPQ9HAP2 919 aa15.99■□□□□ 0.15
CCDC78-211ENST00000481804 FAM207AQ9NSI2 230 aaPredicted RBP15.99■□□□□ 0.15
CCDC78-211ENST00000481804 MOCS3O95396 460 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 MEA1Q16626 185 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 INF2Q27J81 1249 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 RETREG2Q8NC44 543 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 DMGDHQ9UI17 866 aaKnown RBP15.98■□□□□ 0.15
CCDC78-211ENST00000481804 SNX12Q9UMY4 172 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 FAM169AQ9Y6X4 670 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 MYH2Q9UKX2 1941 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 AGPSO00116 658 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 ANKRD13CQ8N6S4 541 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 P2RX5Q93086 422 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 TCP11L1Q9NUJ3 509 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 SAMM50Q9Y512 469 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 PLEKP08567 350 aaPredicted RBP15.98■□□□□ 0.15
CCDC78-211ENST00000481804 ERCC3P19447 782 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 TTI2Q6NXR4 508 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 SMARCAL1Q9NZC9 954 aa15.98■□□□□ 0.15
CCDC78-211ENST00000481804 H0YHG0 523 aa15.97■□□□□ 0.15
CCDC78-211ENST00000481804 KCNB1Q14721 858 aa15.97■□□□□ 0.15
CCDC78-211ENST00000481804 NFRKBQ6P4R8 1299 aa15.97■□□□□ 0.15
CCDC78-211ENST00000481804 HEATR3Q7Z4Q2 680 aa15.97■□□□□ 0.15
CCDC78-211ENST00000481804 DHTKD1Q96HY7 919 aaPredicted RBP15.97■□□□□ 0.15
CCDC78-211ENST00000481804 CAPN6Q9Y6Q1 641 aa15.97■□□□□ 0.15
CCDC78-211ENST00000481804 GOLGA8KD6RF30 607 aa15.97■□□□□ 0.15
CCDC78-211ENST00000481804 EXOC5O00471 708 aa15.97■□□□□ 0.15
CCDC78-211ENST00000481804 ZEB2O60315 1214 aa15.97■□□□□ 0.15
CCDC78-211ENST00000481804 CAVIN4Q5BKX8 364 aa15.97■□□□□ 0.15
CCDC78-211ENST00000481804 C8orf74Q6P047 294 aa15.97■□□□□ 0.15
CCDC78-211ENST00000481804 GIMAP8Q8ND71 665 aaPredicted RBP15.97■□□□□ 0.15
CCDC78-211ENST00000481804 SPATA4Q8NEY3 305 aa15.97■□□□□ 0.15
CCDC78-211ENST00000481804 FAM205AQ6ZU69 1335 aa15.97■□□□□ 0.15
CCDC78-211ENST00000481804 ZC3H4Q9UPT8 1303 aaKnown RBP15.97■□□□□ 0.15
CCDC78-211ENST00000481804 PARP4Q9UKK3 1724 aaKnown RBP15.97■□□□□ 0.15
CCDC78-211ENST00000481804 UBR2Q8IWV8 1755 aa15.97■□□□□ 0.15
CCDC78-211ENST00000481804 NDUFAB1O14561 156 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 NAALADL2Q58DX5 795 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 ANKRD40Q6AI12 368 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 RIOK1Q9BRS2 568 aaKnown RBP15.96■□□□□ 0.15
CCDC78-211ENST00000481804 TMEM60Q9H2L4 133 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 TIAM2Q8IVF5 1701 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 KIAA0754O94854 1291 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 RHOBTB3O94955 611 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 CCNE1P24864 410 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 EVX2Q03828 476 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 KCTD16Q68DU8 428 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 GBP6Q6ZN66 633 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 AENQ8WTP8 325 aaKnown RBP15.96■□□□□ 0.15
CCDC78-211ENST00000481804 BRIP1Q9BX63 1249 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 EHD2Q9NZN4 543 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 PCDHA4Q9UN74 947 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 PCDHA13Q9Y5I0 950 aa15.96■□□□□ 0.15
CCDC78-211ENST00000481804 ERVV-1B6SEH8 477 aa15.96■□□□□ 0.14
CCDC78-211ENST00000481804 INPP5BP32019 993 aa15.96■□□□□ 0.14
CCDC78-211ENST00000481804 ATP1A2P50993 1020 aa15.96■□□□□ 0.14
CCDC78-211ENST00000481804 ZNF34Q8IZ26 560 aa15.96■□□□□ 0.14
CCDC78-211ENST00000481804 TANGO6Q9C0B7 1094 aa15.96■□□□□ 0.14
CCDC78-211ENST00000481804 HYOU1Q9Y4L1 999 aa15.96■□□□□ 0.14
CCDC78-211ENST00000481804 BCL9LQ86UU0 1499 aa15.96■□□□□ 0.14
CCDC78-211ENST00000481804 MNAT1P51948 309 aa15.95■□□□□ 0.14
CCDC78-211ENST00000481804 EPHB4P54760 987 aa15.95■□□□□ 0.14
CCDC78-211ENST00000481804 TDRD12Q587J7 1177 aaKnown RBP15.95■□□□□ 0.14
CCDC78-211ENST00000481804 CABP7Q86V35 215 aa15.95■□□□□ 0.14
CCDC78-211ENST00000481804 CREG2Q8IUH2 290 aa15.95■□□□□ 0.14
CCDC78-211ENST00000481804 DUSP9Q99956 384 aaKnown RBP15.95■□□□□ 0.14
CCDC78-211ENST00000481804 SLAIN2Q9P270 581 aa15.95■□□□□ 0.14
CCDC78-211ENST00000481804 TCP1P17987 556 aaKnown RBP15.95■□□□□ 0.14
CCDC78-211ENST00000481804 PLCG1P19174 1290 aa15.95■□□□□ 0.14
CCDC78-211ENST00000481804 EIF4A3P38919 411 aaKnown RBP15.95■□□□□ 0.14
CCDC78-211ENST00000481804 MAGEA1P43355 309 aa15.95■□□□□ 0.14
CCDC78-211ENST00000481804 KIF11P52732 1056 aa15.95■□□□□ 0.14
CCDC78-211ENST00000481804 MMS22LQ6ZRQ5 1243 aa15.95■□□□□ 0.14
CCDC78-211ENST00000481804 CACNA2D4Q7Z3S7 1137 aa15.95■□□□□ 0.14
CCDC78-211ENST00000481804 IFT81Q8WYA0 676 aa15.95■□□□□ 0.14
CCDC78-211ENST00000481804 OSBPL9Q96SU4 736 aa15.95■□□□□ 0.14
CCDC78-211ENST00000481804 STIM2Q9P246 746 aa15.95■□□□□ 0.14
CCDC78-211ENST00000481804 EIF3HO15372 352 aaKnown RBP eCLIP15.94■□□□□ 0.14
CCDC78-211ENST00000481804 NCK2O43639 380 aa15.94■□□□□ 0.14
CCDC78-211ENST00000481804 KLRC4O43908 158 aa15.94■□□□□ 0.14
CCDC78-211ENST00000481804 PCP11498 1178 aaKnown RBP15.94■□□□□ 0.14
CCDC78-211ENST00000481804 FCER1AP12319 257 aa15.94■□□□□ 0.14
CCDC78-211ENST00000481804 STK4Q13043 487 aa15.94■□□□□ 0.14
CCDC78-211ENST00000481804 PDCLQ13371 301 aa15.94■□□□□ 0.14
CCDC78-211ENST00000481804 ZNF662Q6ZS27 426 aa15.94■□□□□ 0.14
CCDC78-211ENST00000481804 RRAGAQ7L523 313 aa15.94■□□□□ 0.14
CCDC78-211ENST00000481804 MMGT1Q8N4V1 131 aa15.94■□□□□ 0.14
CCDC78-211ENST00000481804 CRNKL1Q9BZJ0 848 aaKnown RBP15.94■□□□□ 0.14
CCDC78-211ENST00000481804 NIP7Q9Y221 180 aaKnown RBP eCLIP15.94■□□□□ 0.14
CCDC78-211ENST00000481804 SHOX2O60902 331 aaPredicted RBP15.94■□□□□ 0.14
CCDC78-211ENST00000481804 CYP2D6P10635 497 aa15.94■□□□□ 0.14
CCDC78-211ENST00000481804 HPS3Q969F9 1004 aa15.94■□□□□ 0.14
CCDC78-211ENST00000481804 SLC4A9Q96Q91 983 aa15.94■□□□□ 0.14
CCDC78-211ENST00000481804 SH2D4AQ9H788 454 aa15.94■□□□□ 0.14
CCDC78-211ENST00000481804 POLD4Q9HCU8 107 aa15.94■□□□□ 0.14
CCDC78-211ENST00000481804 MYL1P05976 194 aa15.94■□□□□ 0.14
CCDC78-211ENST00000481804 IL6STP40189 918 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms