RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 TEX13BQ9BXU2 312 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 BRPF3Q9ULD4 1205 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 LRRC37A2A6NM11 1700 aa12.36□□□□□ -0.43
SSBP1-210ENST00000481508 PALM3A6NDB9 673 aaPredicted RBP12.35□□□□□ -0.43
SSBP1-210ENST00000481508 SLC15A5A6NIM6 579 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 CYTH3O43739 400 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 PGK2P07205 417 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 PARP1P09874 1014 aaKnown RBP12.35□□□□□ -0.43
SSBP1-210ENST00000481508 ADORA2AP29274 412 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 GRK4P32298 578 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 MAP2K5Q13163 448 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 KRT32Q14532 448 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 SART3Q15020 963 aaKnown RBP12.35□□□□□ -0.43
SSBP1-210ENST00000481508 ASPRV1Q53RT3 343 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 MUM1L1Q5H9M0 696 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 GPATCH4Q5T3I0 446 aaKnown RBP12.35□□□□□ -0.43
SSBP1-210ENST00000481508 CCDC144CPQ8IYA2 1237 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 ADGRF4Q8IZF3 695 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 NUP133Q8WUM0 1156 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 NUDT12Q9BQG2 462 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 MTA3Q9BTC8 594 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 HOMER2Q9NSB8 354 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 WDR19Q8NEZ3 1342 aa12.35□□□□□ -0.43
SSBP1-210ENST00000481508 KLRF2D3W0D1 207 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 EPB41L2O43491 1005 aaKnown RBP12.34□□□□□ -0.43
SSBP1-210ENST00000481508 PPP1R11O60927 126 aaPredicted RBP12.34□□□□□ -0.43
SSBP1-210ENST00000481508 PLEKHA8P1O95397 391 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 SLC25A27O95847 323 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 CASTP20810 708 aaKnown RBP12.34□□□□□ -0.43
SSBP1-210ENST00000481508 RPS6KB1P23443 525 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 LIFRP42702 1097 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 OAZ1P54368 228 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 CDC37Q16543 378 aaPredicted RBP12.34□□□□□ -0.43
SSBP1-210ENST00000481508 NFXL1Q6ZNB6 911 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 CCAR1Q8IX12 1150 aaKnown RBP12.34□□□□□ -0.43
SSBP1-210ENST00000481508 SOCS4Q8WXH5 440 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 FGD4Q96M96 766 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 MMP19Q99542 508 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 APBA2Q99767 749 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 MROH8Q9H579 483 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 JMJD4Q9H9V9 463 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 CWC22Q9HCG8 908 aaKnown RBP12.34□□□□□ -0.43
SSBP1-210ENST00000481508 VAT1LQ9HCJ6 419 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 RNF146Q9NTX7 359 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 RAPGEFL1Q9UHV5 662 aa12.34□□□□□ -0.43
SSBP1-210ENST00000481508 DDAH1O94760 285 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 IGHA2P01877 340 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 INHAP05111 366 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 ICAM1P05362 532 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 ALAS1P13196 640 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 RGS2P41220 211 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 QRICH1Q2TAL8 776 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 BLOC1S2Q6QNY1 142 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 Q6ZUG5 572 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 UBE2Q1Q7Z7E8 422 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 CATIPQ7Z7H3 387 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 SGMS1Q86VZ5 419 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.33□□□□□ -0.44
SSBP1-210ENST00000481508 CMTR1Q8N1G2 835 aaKnown RBP12.33□□□□□ -0.44
SSBP1-210ENST00000481508 SLAIN1Q8ND83 568 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 CLEC4DQ8WXI8 215 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 UPF3BQ9BZI7 483 aaKnown RBP12.33□□□□□ -0.44
SSBP1-210ENST00000481508 CCPG1Q9ULG6 757 aa12.33□□□□□ -0.44
SSBP1-210ENST00000481508 CTDP1Q9Y5B0 961 aaPredicted RBP12.33□□□□□ -0.44
SSBP1-210ENST00000481508 CCDC69A6NI79 296 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 NFIBO00712 420 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 FDX1P10109 184 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 FCER1AP12319 257 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 APOBRQ0VD83 1088 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 TOB2Q14106 344 aaPredicted RBP12.32□□□□□ -0.44
SSBP1-210ENST00000481508 ZNF792Q3KQV3 632 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 APOA5Q6Q788 366 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 MICU3Q86XE3 530 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 PXYLP1Q8TE99 480 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 BRF1Q92994 677 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 MTMR8Q96EF0 704 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 TRERF1Q96PN7 1200 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 PURBQ96QR8 312 aaKnown RBP12.32□□□□□ -0.44
SSBP1-210ENST00000481508 LARP6Q9BRS8 491 aaKnown RBP12.32□□□□□ -0.44
SSBP1-210ENST00000481508 UNC93B1Q9H1C4 597 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 ZSWIM6Q9HCJ5 1215 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 FAM217BQ9NTX9 383 aaPredicted RBP12.32□□□□□ -0.44
SSBP1-210ENST00000481508 STXBP5LQ9Y2K9 1186 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 DDX49Q9Y6V7 483 aaKnown RBP12.32□□□□□ -0.44
SSBP1-210ENST00000481508 IVNS1ABPQ9Y6Y0 642 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 ASTN1O14525 1302 aa12.32□□□□□ -0.44
SSBP1-210ENST00000481508 DNAJC25-GNG10A0A024R161 153 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 KLF18A0A0U1RQI7 1052 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 DHX16O60231 1041 aaKnown RBP12.31□□□□□ -0.44
SSBP1-210ENST00000481508 HMGB1P09429 215 aaKnown RBP12.31□□□□□ -0.44
SSBP1-210ENST00000481508 HOXC6P09630 235 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 XRCC5P13010 732 aaKnown RBP12.31□□□□□ -0.44
SSBP1-210ENST00000481508 COPB2P35606 906 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 CNTN2Q02246 1040 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 GSE1Q14687 1217 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 USH1GQ495M9 461 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 SLC30A10Q6XR72 485 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 RUFY3Q7L099 469 aa12.31□□□□□ -0.44
SSBP1-210ENST00000481508 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
SSBP1-210ENST00000481508 ABRAQ8N0Z2 381 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms