RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 C16orf59Q7L2K0 433 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 MSL3Q8N5Y2 521 aaKnown RBP12.37□□□□□ -0.43
SMURF1-204ENST00000480055 REPS2Q8NFH8 660 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 ADAMTS19Q8TE59 1207 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 VTI1AQ96AJ9 217 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 ASB2Q96Q27 587 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 MKNK2Q9HBH9 465 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 RAPGEFL1Q9UHV5 662 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 ZHX1Q9UKY1 873 aaPredicted RBP12.37□□□□□ -0.43
SMURF1-204ENST00000480055 PPP1R9AQ9ULJ8 1098 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 TANC1Q9C0D5 1861 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 ELP1O95163 1332 aa12.37□□□□□ -0.43
SMURF1-204ENST00000480055 MYADML2A6NDP7 307 aa12.36□□□□□ -0.43
SMURF1-204ENST00000480055 CHGBP05060 677 aa12.36□□□□□ -0.43
SMURF1-204ENST00000480055 PLA2G5P39877 138 aa12.36□□□□□ -0.43
SMURF1-204ENST00000480055 UBE3CQ15386 1083 aa12.36□□□□□ -0.43
SMURF1-204ENST00000480055 SNRNP48Q6IEG0 339 aaKnown RBP12.36□□□□□ -0.43
SMURF1-204ENST00000480055 PSRC1Q6PGN9 363 aaPredicted RBP12.36□□□□□ -0.43
SMURF1-204ENST00000480055 NUP88Q99567 741 aaPredicted RBP12.36□□□□□ -0.43
SMURF1-204ENST00000480055 HAUS7Q99871 368 aa12.36□□□□□ -0.43
SMURF1-204ENST00000480055 SLF1Q9BQI6 1058 aa12.36□□□□□ -0.43
SMURF1-204ENST00000480055 PRDM12Q9H4Q4 367 aa12.36□□□□□ -0.43
SMURF1-204ENST00000480055 ARPP21Q9UBL0 812 aaPredicted RBP12.36□□□□□ -0.43
SMURF1-204ENST00000480055 FAM184BQ9ULE4 1060 aa12.36□□□□□ -0.43
SMURF1-204ENST00000480055 COG6Q9Y2V7 657 aa12.36□□□□□ -0.43
SMURF1-204ENST00000480055 PTPRSQ13332 1948 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 GRXCR1A8MXD5 290 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 MINDY4BA8MYZ0 360 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 ZBED4O75132 1171 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 DUSP11O75319 330 aaKnown RBP12.35□□□□□ -0.43
SMURF1-204ENST00000480055 SNAI1O95863 264 aaPredicted RBP12.35□□□□□ -0.43
SMURF1-204ENST00000480055 CSF2RAP15509 400 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 CDK7P50613 346 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 ADGRE1Q14246 886 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 KCNA10Q16322 511 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 MAMDC4Q6UXC1 1216 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 CCDC129Q6ZRS4 1044 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 CPXCR1Q8N123 301 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 PPM1EQ8WY54 764 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 GLT1D1Q96MS3 346 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 TEX13BQ9BXU2 312 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 PUS7LQ9H0K6 701 aaKnown RBP12.35□□□□□ -0.43
SMURF1-204ENST00000480055 CHMP4BQ9H444 224 aaKnown RBP12.35□□□□□ -0.43
SMURF1-204ENST00000480055 DDX19BQ9UMR2 479 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 COL4A4P53420 1690 aaPredicted RBP12.35□□□□□ -0.43
SMURF1-204ENST00000480055 ZBED9Q6R2W3 1325 aa12.35□□□□□ -0.43
SMURF1-204ENST00000480055 PRRC2BQ5JSZ5 2229 aaKnown RBP12.34□□□□□ -0.43
SMURF1-204ENST00000480055 DNAJC25-GNG10A0A024R161 153 aa12.34□□□□□ -0.43
SMURF1-204ENST00000480055 ADCY6O43306 1168 aa12.34□□□□□ -0.43
SMURF1-204ENST00000480055 C6orf222P0C671 652 aaPredicted RBP12.34□□□□□ -0.43
SMURF1-204ENST00000480055 MRPS5P82675 430 aaKnown RBP12.34□□□□□ -0.43
SMURF1-204ENST00000480055 RAB30Q15771 203 aa12.34□□□□□ -0.43
SMURF1-204ENST00000480055 C6orf132Q5T0Z8 1188 aa12.34□□□□□ -0.43
SMURF1-204ENST00000480055 SIRT2Q8IXJ6 389 aa12.34□□□□□ -0.43
SMURF1-204ENST00000480055 FAM126BQ8IXS8 530 aa12.34□□□□□ -0.43
SMURF1-204ENST00000480055 ANKRD35Q8N283 1001 aa12.34□□□□□ -0.43
SMURF1-204ENST00000480055 TMEM199Q8N511 208 aa12.34□□□□□ -0.43
SMURF1-204ENST00000480055 PRPF38AQ8NAV1 312 aaKnown RBP12.34□□□□□ -0.43
SMURF1-204ENST00000480055 KIFC2Q96AC6 838 aa12.34□□□□□ -0.43
SMURF1-204ENST00000480055 UHRF1Q96T88 793 aaPredicted RBP12.34□□□□□ -0.43
SMURF1-204ENST00000480055 UPF3AQ9H1J1 476 aaKnown RBP12.34□□□□□ -0.43
SMURF1-204ENST00000480055 SPC25Q9HBM1 224 aa12.34□□□□□ -0.43
SMURF1-204ENST00000480055 CLIP2Q9UDT6 1046 aa12.34□□□□□ -0.43
SMURF1-204ENST00000480055 ISY1Q9ULR0 285 aaKnown RBP12.34□□□□□ -0.43
SMURF1-204ENST00000480055 A0A0U1RQG5 324 aaPredicted RBP12.33□□□□□ -0.44
SMURF1-204ENST00000480055 F5H6K3 240 aa12.33□□□□□ -0.44
SMURF1-204ENST00000480055 ARHGAP33O14559 1287 aa12.33□□□□□ -0.44
SMURF1-204ENST00000480055 APPP05067 770 aa12.33□□□□□ -0.44
SMURF1-204ENST00000480055 ASGR1P07306 291 aa12.33□□□□□ -0.44
SMURF1-204ENST00000480055 KLRC3Q07444 240 aa12.33□□□□□ -0.44
SMURF1-204ENST00000480055 ZNF365Q70YC5 407 aa12.33□□□□□ -0.44
SMURF1-204ENST00000480055 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMURF1-204ENST00000480055 ZNF444Q8N0Y2 327 aaPredicted RBP12.33□□□□□ -0.44
SMURF1-204ENST00000480055 PCSK9Q8NBP7 692 aaKnown RBP12.33□□□□□ -0.44
SMURF1-204ENST00000480055 KCNK17Q96T54 332 aa12.33□□□□□ -0.44
SMURF1-204ENST00000480055 PPP1R12CQ9BZL4 782 aa12.33□□□□□ -0.44
SMURF1-204ENST00000480055 LRRCC1Q9C099 1032 aa12.33□□□□□ -0.44
SMURF1-204ENST00000480055 ZBTB40Q9NUA8 1239 aa12.33□□□□□ -0.44
SMURF1-204ENST00000480055 RIPK3Q9Y572 518 aa12.33□□□□□ -0.44
SMURF1-204ENST00000480055 ARVCFO00192 962 aa12.32□□□□□ -0.44
SMURF1-204ENST00000480055 SMARCA5O60264 1052 aaPredicted RBP12.32□□□□□ -0.44
SMURF1-204ENST00000480055 NDUFB10O96000 172 aa12.32□□□□□ -0.44
SMURF1-204ENST00000480055 CD4P01730 458 aa12.32□□□□□ -0.44
SMURF1-204ENST00000480055 ACRP10323 421 aa12.32□□□□□ -0.44
SMURF1-204ENST00000480055 GJA9P57773 515 aa12.32□□□□□ -0.44
SMURF1-204ENST00000480055 ACVR2BQ13705 512 aa12.32□□□□□ -0.44
SMURF1-204ENST00000480055 NOL8Q76FK4 1167 aaKnown RBP12.32□□□□□ -0.44
SMURF1-204ENST00000480055 HERVK_113Q902F9 699 aa12.32□□□□□ -0.44
SMURF1-204ENST00000480055 FGD4Q96M96 766 aa12.32□□□□□ -0.44
SMURF1-204ENST00000480055 STRBPQ96SI9 672 aaKnown RBP12.32□□□□□ -0.44
SMURF1-204ENST00000480055 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMURF1-204ENST00000480055 RAVER2Q9HCJ3 691 aaKnown RBP12.32□□□□□ -0.44
SMURF1-204ENST00000480055 IL23AQ9NPF7 189 aa12.32□□□□□ -0.44
SMURF1-204ENST00000480055 NYAP2Q9P242 653 aa12.32□□□□□ -0.44
SMURF1-204ENST00000480055 MSRAQ9UJ68 235 aa12.32□□□□□ -0.44
SMURF1-204ENST00000480055 ATP2A1O14983 1001 aa12.31□□□□□ -0.44
SMURF1-204ENST00000480055 CTAGE5O15320 804 aa12.31□□□□□ -0.44
SMURF1-204ENST00000480055 TLR3O15455 904 aaKnown RBP12.31□□□□□ -0.44
SMURF1-204ENST00000480055 RASA1P20936 1047 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms