RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 GSDMDP57764 484 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 CUL4BQ13620 913 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 TRAPPC3LQ5T215 181 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 USP17L2Q6R6M4 530 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 TOGARAM2Q6ZUX3 1019 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 CNBD1Q8NA66 436 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 RNF26Q9BY78 433 aaPredicted RBP6.81□□□□□ -1.32
SH3D19-207ENST00000478503 VPS16Q9H269 839 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 LRRC4BQ9NT99 713 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 CTNND2Q9UQB3 1225 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 SRPRBQ9Y5M8 271 aaKnown RBP6.81□□□□□ -1.32
SH3D19-207ENST00000478503 PCNTO95613 3336 aa6.81□□□□□ -1.32
SH3D19-207ENST00000478503 RPS6KA4O75676 772 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 PSMC1P62191 440 aaKnown RBP6.8□□□□□ -1.32
SH3D19-207ENST00000478503 IL17AQ16552 155 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 RRAGBQ5VZM2 374 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.8□□□□□ -1.32
SH3D19-207ENST00000478503 CCDC89Q8N998 374 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 TAF4BQ92750 862 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 PAGE5Q96GU1 130 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 PHF20Q9BVI0 1012 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 GDAQ9Y2T3 454 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 BAZ2AQ9UIF9 1905 aaKnown RBP6.8□□□□□ -1.32
SH3D19-207ENST00000478503 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.8□□□□□ -1.32
SH3D19-207ENST00000478503 H0YHG0 523 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 SETSIPP0DME0 302 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 SCG2P13521 617 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 TM4SF1P30408 202 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 TNNI2P48788 182 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 SARNPP82979 210 aaKnown RBP6.8□□□□□ -1.32
SH3D19-207ENST00000478503 NPY5RQ15761 445 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 PLEKHG6Q3KR16 790 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 RCSD1Q6JBY9 416 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 CCDC174Q6PII3 467 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 UBE2Q1Q7Z7E8 422 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 PARP9Q8IXQ6 854 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 ZNF444Q8N0Y2 327 aaPredicted RBP6.8□□□□□ -1.32
SH3D19-207ENST00000478503 FNBP4Q8N3X1 1017 aaPredicted RBP6.8□□□□□ -1.32
SH3D19-207ENST00000478503 TMC2Q8TDI7 906 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 GJA10Q969M2 543 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 BRMS1Q9HCU9 246 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 THRAP3Q9Y2W1 955 aaKnown RBP6.8□□□□□ -1.32
SH3D19-207ENST00000478503 MYH2Q9UKX2 1941 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 SOWAHDA6NJG2 315 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 FANCGO15287 622 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 CBFA2T2O43439 604 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 CA8P35219 290 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 SCNN1DP51172 638 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 GPSM2P81274 684 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 LRCH2Q5VUJ6 765 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 NYAP1Q6ZVC0 841 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 RPGRQ92834 1020 aaKnown RBP6.8□□□□□ -1.32
SH3D19-207ENST00000478503 HPS3Q969F9 1004 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 TIGD1Q96MW7 591 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 OSBPL5Q9H0X9 879 aaPredicted RBP6.8□□□□□ -1.32
SH3D19-207ENST00000478503 HOOK1Q9UJC3 728 aaKnown RBP6.8□□□□□ -1.32
SH3D19-207ENST00000478503 FRMPD2Q68DX3 1309 aaPredicted RBP6.8□□□□□ -1.32
SH3D19-207ENST00000478503 RTL9Q8NET4 1388 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 PAPPAQ13219 1627 aa6.8□□□□□ -1.32
SH3D19-207ENST00000478503 ROBO1Q9Y6N7 1651 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 TRIM49BA6NDI0 452 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 FAM196BA6NMK8 535 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 PRPF3O43395 683 aaKnown RBP6.79□□□□□ -1.32
SH3D19-207ENST00000478503 GNG11P61952 73 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 SLC35G1Q2M3R5 365 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 VSTM4Q8IW00 320 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 BRIP1Q9BX63 1249 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 TMEM60Q9H2L4 133 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 CD248Q9HCU0 757 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 ST7Q9NRC1 585 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 CNTNAP5Q8WYK1 1306 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 STK36Q9NRP7 1315 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 DOT1LQ8TEK3 1739 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 TLDC2A0PJX2 215 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 ANKRD33BA6NCL7 494 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 IKBKBO14920 756 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 TOM1O60784 492 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 SERPINB4P48594 390 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 MARSP56192 900 aaKnown RBP6.79□□□□□ -1.32
SH3D19-207ENST00000478503 ZBED6P86452 979 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 DOK7Q18PE1 504 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 LETM2Q2VYF4 491 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 JAKMIP3Q5VZ66 844 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 NT5DC4Q86YG4 428 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 GOLGA6L1Q8N7Z2 621 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 CCDC150Q8NCX0 1101 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 WDR24Q96S15 920 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 TAB2Q9NYJ8 693 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 TFR2Q9UP52 801 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 CEP131Q9UPN4 1083 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 CYTH3O43739 400 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 NEMFO60524 1076 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 ABL1P00519 1130 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 BTDP43251 543 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 CACNB3P54284 484 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 GTF2IP78347 998 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 MORC3Q14149 939 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 MFSD14BQ5SR56 506 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 MTRQ99707 1265 aa6.79□□□□□ -1.32
SH3D19-207ENST00000478503 BAG1Q99933 345 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms