RNA–Protein interactions for RNA: ENST00000478424.5

ARF1-209, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-209ENST00000478424 TNFAIP2Q03169 654 aa29.29■■■□□ 2.28
ARF1-209ENST00000478424 PLEKHM2Q8IWE5 1019 aa29.29■■■□□ 2.28
ARF1-209ENST00000478424 CYP39A1Q9NYL5 469 aa29.29■■■□□ 2.28
ARF1-209ENST00000478424 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.28■■■□□ 2.28
ARF1-209ENST00000478424 ICAM1P05362 532 aa29.28■■■□□ 2.28
ARF1-209ENST00000478424 CST5P28325 142 aaPredicted RBP29.28■■■□□ 2.28
ARF1-209ENST00000478424 BEX3Q00994 111 aa29.28■■■□□ 2.28
ARF1-209ENST00000478424 AKNAD1Q5T1N1 836 aa29.28■■■□□ 2.28
ARF1-209ENST00000478424 CWC27Q6UX04 472 aaKnown RBP29.28■■■□□ 2.28
ARF1-209ENST00000478424 FBXO16Q8IX29 292 aaPredicted RBP29.28■■■□□ 2.28
ARF1-209ENST00000478424 UPF3AQ9H1J1 476 aaKnown RBP29.28■■■□□ 2.28
ARF1-209ENST00000478424 KIAA0355O15063 1070 aa29.27■■■□□ 2.28
ARF1-209ENST00000478424 GJA9P57773 515 aa29.27■■■□□ 2.28
ARF1-209ENST00000478424 NUCB1Q02818 461 aa29.27■■■□□ 2.28
ARF1-209ENST00000478424 ZNF697Q5TEC3 545 aa29.27■■■□□ 2.28
ARF1-209ENST00000478424 CCSAPQ6IQ19 270 aaPredicted RBP29.27■■■□□ 2.28
ARF1-209ENST00000478424 RNPC3Q96LT9 517 aaKnown RBP29.27■■■□□ 2.28
ARF1-209ENST00000478424 KATNBL1Q9H079 304 aa29.27■■■□□ 2.28
ARF1-209ENST00000478424 NEDD4P46934 1319 aa29.26■■■□□ 2.27
ARF1-209ENST00000478424 NOVP48745 357 aa29.26■■■□□ 2.27
ARF1-209ENST00000478424 FPGSQ05932 587 aa29.26■■■□□ 2.27
ARF1-209ENST00000478424 FAAP100Q0VG06 881 aa29.26■■■□□ 2.27
ARF1-209ENST00000478424 TLK2Q86UE8 772 aa29.26■■■□□ 2.27
ARF1-209ENST00000478424 TICAM2Q86XR7 235 aa29.26■■■□□ 2.27
ARF1-209ENST00000478424 PURBQ96QR8 312 aaKnown RBP29.26■■■□□ 2.27
ARF1-209ENST00000478424 ZKSCAN3Q9BRR0 538 aa29.26■■■□□ 2.27
ARF1-209ENST00000478424 RANBP17Q9H2T7 1088 aaKnown RBP29.26■■■□□ 2.27
ARF1-209ENST00000478424 RNF41Q9H4P4 317 aaPredicted RBP29.26■■■□□ 2.27
ARF1-209ENST00000478424 STXBP5LQ9Y2K9 1186 aa29.26■■■□□ 2.27
ARF1-209ENST00000478424 ASTN1O14525 1302 aa29.25■■■□□ 2.27
ARF1-209ENST00000478424 PTGS1P23219 599 aa29.25■■■□□ 2.27
ARF1-209ENST00000478424 ANKRD33Q7Z3H0 272 aa29.25■■■□□ 2.27
ARF1-209ENST00000478424 AP5M1Q9H0R1 490 aa29.25■■■□□ 2.27
ARF1-209ENST00000478424 TCP11L1Q9NUJ3 509 aa29.25■■■□□ 2.27
ARF1-209ENST00000478424 ELP1O95163 1332 aa29.24■■■□□ 2.27
ARF1-209ENST00000478424 A0A0U1RQG5 324 aaPredicted RBP29.24■■■□□ 2.27
ARF1-209ENST00000478424 PTPDC1A2A3K4 754 aa29.24■■■□□ 2.27
ARF1-209ENST00000478424 ZNF213O14771 459 aa29.24■■■□□ 2.27
ARF1-209ENST00000478424 PDHBP11177 359 aa29.24■■■□□ 2.27
ARF1-209ENST00000478424 ESR2Q92731 530 aa29.24■■■□□ 2.27
ARF1-209ENST00000478424 TOX2Q96NM4 488 aa29.24■■■□□ 2.27
ARF1-209ENST00000478424 COL6A3P12111 3177 aa29.24■■■□□ 2.27
ARF1-209ENST00000478424 MROH7Q68CQ1 1323 aa29.23■■■□□ 2.27
ARF1-209ENST00000478424 LRRC37A2A6NM11 1700 aa29.23■■■□□ 2.27
ARF1-209ENST00000478424 NFIBO00712 420 aa29.23■■■□□ 2.27
ARF1-209ENST00000478424 EPHB4P54760 987 aa29.23■■■□□ 2.27
ARF1-209ENST00000478424 BAATQ14032 418 aaPredicted RBP29.23■■■□□ 2.27
ARF1-209ENST00000478424 BTNL9Q6UXG8 535 aa29.23■■■□□ 2.27
ARF1-209ENST00000478424 PDGFCQ9NRA1 345 aa29.23■■■□□ 2.27
ARF1-209ENST00000478424 DYNC1LI2O43237 492 aaPredicted RBP29.22■■■□□ 2.27
ARF1-209ENST00000478424 PCP11498 1178 aaKnown RBP29.22■■■□□ 2.27
ARF1-209ENST00000478424 LAMA2P24043 3122 aaKnown RBP29.22■■■□□ 2.27
ARF1-209ENST00000478424 SMPD1P17405 629 aa29.21■■■□□ 2.27
ARF1-209ENST00000478424 CALML3P27482 149 aa29.21■■■□□ 2.27
ARF1-209ENST00000478424 ZNF543Q08ER8 600 aa29.21■■■□□ 2.27
ARF1-209ENST00000478424 CXCL17Q6UXB2 119 aa29.21■■■□□ 2.27
ARF1-209ENST00000478424 SLC30A10Q6XR72 485 aa29.21■■■□□ 2.27
ARF1-209ENST00000478424 GUCD1Q96NT3 240 aa29.21■■■□□ 2.27
ARF1-209ENST00000478424 OSBPL3Q9H4L5 887 aa29.21■■■□□ 2.27
ARF1-209ENST00000478424 ARVCFO00192 962 aa29.2■■■□□ 2.26
ARF1-209ENST00000478424 TLR3O15455 904 aaKnown RBP29.2■■■□□ 2.26
ARF1-209ENST00000478424 GOLGA8HP0CJ92 632 aa29.2■■■□□ 2.26
ARF1-209ENST00000478424 FSCN1Q16658 493 aaKnown RBP29.2■■■□□ 2.26
ARF1-209ENST00000478424 FAM109BQ6ICB4 259 aaPredicted RBP29.2■■■□□ 2.26
ARF1-209ENST00000478424 PPP1R12CQ9BZL4 782 aa29.2■■■□□ 2.26
ARF1-209ENST00000478424 ADD3Q9UEY8 706 aaKnown RBP29.2■■■□□ 2.26
ARF1-209ENST00000478424 TBX21Q9UL17 535 aa29.2■■■□□ 2.26
ARF1-209ENST00000478424 LCTP09848 1927 aa29.2■■■□□ 2.26
ARF1-209ENST00000478424 HIP1O00291 1037 aa29.19■■■□□ 2.26
ARF1-209ENST00000478424 CTAGE5O15320 804 aa29.19■■■□□ 2.26
ARF1-209ENST00000478424 KDM4AO75164 1064 aa29.19■■■□□ 2.26
ARF1-209ENST00000478424 KIAA1211Q6ZU35 1233 aa29.19■■■□□ 2.26
ARF1-209ENST00000478424 TTC14Q96N46 770 aa29.19■■■□□ 2.26
ARF1-209ENST00000478424 VTA1Q9NP79 307 aa29.19■■■□□ 2.26
ARF1-209ENST00000478424 GNEQ9Y223 722 aaKnown RBP29.19■■■□□ 2.26
ARF1-209ENST00000478424 ZEB2O60315 1214 aa29.18■■■□□ 2.26
ARF1-209ENST00000478424 TIMP1P01033 207 aa29.18■■■□□ 2.26
ARF1-209ENST00000478424 ALDH5A1P51649 535 aaPredicted RBP29.18■■■□□ 2.26
ARF1-209ENST00000478424 USH1GQ495M9 461 aa29.18■■■□□ 2.26
ARF1-209ENST00000478424 CPVLQ9H3G5 476 aa29.18■■■□□ 2.26
ARF1-209ENST00000478424 B4E1Z4 1266 aa29.17■■■□□ 2.26
ARF1-209ENST00000478424 CDK7P50613 346 aa29.17■■■□□ 2.26
ARF1-209ENST00000478424 TMEM63BQ5T3F8 832 aa29.17■■■□□ 2.26
ARF1-209ENST00000478424 IQSEC1Q6DN90 963 aa29.17■■■□□ 2.26
ARF1-209ENST00000478424 RNF207Q6ZRF8 634 aa29.17■■■□□ 2.26
ARF1-209ENST00000478424 IQCA1Q86XH1 822 aa29.17■■■□□ 2.26
ARF1-209ENST00000478424 LAMA4Q16363 1823 aa29.17■■■□□ 2.26
ARF1-209ENST00000478424 SMAD3P84022 425 aaKnown RBP29.16■■■□□ 2.26
ARF1-209ENST00000478424 TAPT1Q6NXT6 567 aa29.16■■■□□ 2.26
ARF1-209ENST00000478424 FAM126BQ8IXS8 530 aa29.16■■■□□ 2.26
ARF1-209ENST00000478424 UBA5Q9GZZ9 404 aa29.16■■■□□ 2.26
ARF1-209ENST00000478424 KAT14Q9H8E8 782 aa29.16■■■□□ 2.26
ARF1-209ENST00000478424 IMMTQ16891 758 aaKnown RBP29.15■■■□□ 2.26
ARF1-209ENST00000478424 GPATCH4Q5T3I0 446 aaKnown RBP29.15■■■□□ 2.26
ARF1-209ENST00000478424 PNMA1Q8ND90 353 aa29.15■■■□□ 2.26
ARF1-209ENST00000478424 CLEC4DQ8WXI8 215 aa29.15■■■□□ 2.26
ARF1-209ENST00000478424 PNMA2Q9UL42 364 aa29.15■■■□□ 2.26
ARF1-209ENST00000478424 DHX16O60231 1041 aaKnown RBP29.14■■■□□ 2.26
ARF1-209ENST00000478424 PDE4DQ08499 809 aa29.14■■■□□ 2.26
ARF1-209ENST00000478424 PPIGQ13427 754 aaKnown RBP eCLIP29.14■■■□□ 2.267e-10■□□□□ 8.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms