RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 UBE2OQ9C0C9 1292 aaKnown RBP16.53■□□□□ 0.24
PDE6D-204ENST00000477748 XPNPEP3Q9NQH7 507 aa16.53■□□□□ 0.24
PDE6D-204ENST00000477748 PPP4R2Q9NY27 417 aa16.53■□□□□ 0.24
PDE6D-204ENST00000477748 DNAJC25-GNG10A0A024R161 153 aa16.52■□□□□ 0.24
PDE6D-204ENST00000477748 ERICH2A1L162 156 aa16.52■□□□□ 0.24
PDE6D-204ENST00000477748 IFIT3O14879 490 aaKnown RBP16.52■□□□□ 0.24
PDE6D-204ENST00000477748 ICAM1P05362 532 aa16.52■□□□□ 0.24
PDE6D-204ENST00000477748 ATN1P54259 1190 aaPredicted RBP16.52■□□□□ 0.24
PDE6D-204ENST00000477748 RTP1P59025 263 aa16.52■□□□□ 0.24
PDE6D-204ENST00000477748 LRIT3Q3SXY7 679 aa16.52■□□□□ 0.24
PDE6D-204ENST00000477748 ASPRV1Q53RT3 343 aa16.52■□□□□ 0.24
PDE6D-204ENST00000477748 ERICH6BQ5W0A0 696 aa16.52■□□□□ 0.24
PDE6D-204ENST00000477748 GPR153Q6NV75 609 aa16.52■□□□□ 0.24
PDE6D-204ENST00000477748 MAMDC4Q6UXC1 1216 aa16.52■□□□□ 0.24
PDE6D-204ENST00000477748 RNF180Q86T96 592 aa16.52■□□□□ 0.24
PDE6D-204ENST00000477748 PRKAG2Q9UGJ0 569 aa16.52■□□□□ 0.24
PDE6D-204ENST00000477748 MYCNP04198 464 aaPredicted RBP16.51■□□□□ 0.23
PDE6D-204ENST00000477748 PARP1P09874 1014 aaKnown RBP16.51■□□□□ 0.23
PDE6D-204ENST00000477748 ZNF865P0CJ78 1059 aaPredicted RBP16.51■□□□□ 0.23
PDE6D-204ENST00000477748 SART3Q15020 963 aaKnown RBP16.51■□□□□ 0.23
PDE6D-204ENST00000477748 SNX17Q15036 470 aa16.51■□□□□ 0.23
PDE6D-204ENST00000477748 C1orf53Q5VUE5 145 aa16.51■□□□□ 0.23
PDE6D-204ENST00000477748 CHST3Q7LGC8 479 aa16.51■□□□□ 0.23
PDE6D-204ENST00000477748 LBHD1Q9BQE6 289 aaPredicted RBP16.51■□□□□ 0.23
PDE6D-204ENST00000477748 UBA5Q9GZZ9 404 aa16.51■□□□□ 0.23
PDE6D-204ENST00000477748 CPVLQ9H3G5 476 aa16.51■□□□□ 0.23
PDE6D-204ENST00000477748 A1CFQ9NQ94 594 aaKnown RBP16.51■□□□□ 0.23
PDE6D-204ENST00000477748 PHF24Q9UPV7 400 aa16.51■□□□□ 0.23
PDE6D-204ENST00000477748 LAMA2P24043 3122 aaKnown RBP16.5■□□□□ 0.23
PDE6D-204ENST00000477748 MCM3APO60318 1980 aa16.5■□□□□ 0.23
PDE6D-204ENST00000477748 POTEB2H3BUK9 544 aa16.5■□□□□ 0.23
PDE6D-204ENST00000477748 SOX1O00570 391 aaPredicted RBP16.5■□□□□ 0.23
PDE6D-204ENST00000477748 SLC27A2O14975 620 aa16.5■□□□□ 0.23
PDE6D-204ENST00000477748 TAL1P17542 331 aaPredicted RBP16.5■□□□□ 0.23
PDE6D-204ENST00000477748 WTAPQ15007 396 aa16.5■□□□□ 0.23
PDE6D-204ENST00000477748 NECTIN1Q15223 517 aa16.5■□□□□ 0.23
PDE6D-204ENST00000477748 MUM1L1Q5H9M0 696 aa16.5■□□□□ 0.23
PDE6D-204ENST00000477748 CREB3L3Q68CJ9 461 aa16.5■□□□□ 0.23
PDE6D-204ENST00000477748 SLC39A5Q6ZMH5 540 aa16.5■□□□□ 0.23
PDE6D-204ENST00000477748 PNMA2Q9UL42 364 aa16.5■□□□□ 0.23
PDE6D-204ENST00000477748 ATP11BQ9Y2G3 1177 aa16.5■□□□□ 0.23
PDE6D-204ENST00000477748 MYH6P13533 1939 aa16.5■□□□□ 0.23
PDE6D-204ENST00000477748 DHX16O60231 1041 aaKnown RBP16.49■□□□□ 0.23
PDE6D-204ENST00000477748 ADCYAP1R1P41586 468 aa16.49■□□□□ 0.23
PDE6D-204ENST00000477748 MDM2Q00987 491 aaPredicted RBP16.49■□□□□ 0.23
PDE6D-204ENST00000477748 TMEM67Q5HYA8 995 aa16.49■□□□□ 0.23
PDE6D-204ENST00000477748 NSMFQ6X4W1 530 aa16.49■□□□□ 0.23
PDE6D-204ENST00000477748 MB21D2Q8IYB1 491 aaPredicted RBP16.49■□□□□ 0.23
PDE6D-204ENST00000477748 FAM184BQ9ULE4 1060 aa16.49■□□□□ 0.23
PDE6D-204ENST00000477748 SNAI1O95863 264 aaPredicted RBP16.48■□□□□ 0.23
PDE6D-204ENST00000477748 ANTXR2P58335 489 aa16.48■□□□□ 0.23
PDE6D-204ENST00000477748 CNTN2Q02246 1040 aa16.48■□□□□ 0.23
PDE6D-204ENST00000477748 TRIM60Q495X7 471 aa16.48■□□□□ 0.23
PDE6D-204ENST00000477748 RNF20Q5VTR2 975 aa16.48■□□□□ 0.23
PDE6D-204ENST00000477748 ADGRF4Q8IZF3 695 aa16.48■□□□□ 0.23
PDE6D-204ENST00000477748 FAM133AQ8N9E0 248 aa16.48■□□□□ 0.23
PDE6D-204ENST00000477748 LRCH3Q96II8 777 aa16.48■□□□□ 0.23
PDE6D-204ENST00000477748 TSEN34Q9BSV6 310 aaKnown RBP16.48■□□□□ 0.23
PDE6D-204ENST00000477748 ABHD16BQ9H3Z7 469 aa16.48■□□□□ 0.23
PDE6D-204ENST00000477748 SENP2Q9HC62 589 aa16.48■□□□□ 0.23
PDE6D-204ENST00000477748 ZHX1Q9UKY1 873 aaPredicted RBP16.48■□□□□ 0.23
PDE6D-204ENST00000477748 WDR19Q8NEZ3 1342 aa16.47■□□□□ 0.23
PDE6D-204ENST00000477748 ADAMTS4O75173 837 aa16.47■□□□□ 0.23
PDE6D-204ENST00000477748 PGK1P00558 417 aa16.47■□□□□ 0.23
PDE6D-204ENST00000477748 MCM5P33992 734 aa16.47■□□□□ 0.23
PDE6D-204ENST00000477748 CDC37Q16543 378 aaPredicted RBP16.47■□□□□ 0.23
PDE6D-204ENST00000477748 STAG2Q8N3U4 1231 aa16.47■□□□□ 0.23
PDE6D-204ENST00000477748 FERMT2Q96AC1 680 aa16.47■□□□□ 0.23
PDE6D-204ENST00000477748 FGD4Q96M96 766 aa16.47■□□□□ 0.23
PDE6D-204ENST00000477748 VAT1LQ9HCJ6 419 aa16.47■□□□□ 0.23
PDE6D-204ENST00000477748 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.47■□□□□ 0.23
PDE6D-204ENST00000477748 CYP39A1Q9NYL5 469 aa16.47■□□□□ 0.23
PDE6D-204ENST00000477748 SYNRGQ9UMZ2 1314 aa16.46■□□□□ 0.23
PDE6D-204ENST00000477748 SOWAHBA6NEL2 793 aa16.46■□□□□ 0.23
PDE6D-204ENST00000477748 KLRF2D3W0D1 207 aa16.46■□□□□ 0.23
PDE6D-204ENST00000477748 NFIBO00712 420 aa16.46■□□□□ 0.23
PDE6D-204ENST00000477748 PRC1O43663 620 aa16.46■□□□□ 0.23
PDE6D-204ENST00000477748 DUSP11O75319 330 aaKnown RBP16.46■□□□□ 0.23
PDE6D-204ENST00000477748 ACVR2BQ13705 512 aa16.46■□□□□ 0.23
PDE6D-204ENST00000477748 GRM4Q14833 912 aa16.46■□□□□ 0.23
PDE6D-204ENST00000477748 USH1GQ495M9 461 aa16.46■□□□□ 0.23
PDE6D-204ENST00000477748 ARMCX2Q7L311 632 aa16.46■□□□□ 0.23
PDE6D-204ENST00000477748 CATIPQ7Z7H3 387 aa16.46■□□□□ 0.23
PDE6D-204ENST00000477748 IGDCC4Q8TDY8 1250 aa16.46■□□□□ 0.23
PDE6D-204ENST00000477748 LENG1Q96BZ8 264 aaPredicted RBP16.46■□□□□ 0.23
PDE6D-204ENST00000477748 A0A1W2PQ45 241 aaPredicted RBP16.45■□□□□ 0.22
PDE6D-204ENST00000477748 A0A1W2PQY0 241 aa16.45■□□□□ 0.22
PDE6D-204ENST00000477748 PTPDC1A2A3K4 754 aa16.45■□□□□ 0.22
PDE6D-204ENST00000477748 PALM3A6NDB9 673 aaPredicted RBP16.45■□□□□ 0.22
PDE6D-204ENST00000477748 MOXD2PA6NHM9 499 aa16.45■□□□□ 0.22
PDE6D-204ENST00000477748 CST5P28325 142 aaPredicted RBP16.45■□□□□ 0.22
PDE6D-204ENST00000477748 BAATQ14032 418 aaPredicted RBP16.45■□□□□ 0.22
PDE6D-204ENST00000477748 QRICH1Q2TAL8 776 aa16.45■□□□□ 0.22
PDE6D-204ENST00000477748 CCDC144CPQ8IYA2 1237 aa16.45■□□□□ 0.22
PDE6D-204ENST00000477748 NUP133Q8WUM0 1156 aa16.45■□□□□ 0.22
PDE6D-204ENST00000477748 CLEC4DQ8WXI8 215 aa16.45■□□□□ 0.22
PDE6D-204ENST00000477748 MTA3Q9BTC8 594 aa16.45■□□□□ 0.22
PDE6D-204ENST00000477748 JMJD4Q9H9V9 463 aa16.45■□□□□ 0.22
PDE6D-204ENST00000477748 SPC25Q9HBM1 224 aa16.45■□□□□ 0.22
PDE6D-204ENST00000477748 PRDM5Q9NQX1 630 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms