RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SCARF1Q14162 830 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 ERFEQ4G0M1 354 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 SLC10A5Q5PT55 438 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 LCA5Q86VQ0 697 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 SAMD3Q8N6K7 520 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 HELBQ8NG08 1087 aaPredicted RBP14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 APPBP2Q92624 585 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 FAM81BQ96LP2 452 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 NEK1Q96PY6 1258 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 QTRT2Q9H974 415 aaKnown RBP14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 WDR35Q9P2L0 1181 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 MYH7P12883 1935 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 ARAP2Q8WZ64 1704 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 VPS37CA5D8V6 355 aaPredicted RBP14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 STXBP3O00186 592 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 CBFA2T2O43439 604 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 STX10O60499 249 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 HSPD1P10809 573 aaKnown RBP14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 CTCFP49711 727 aaPredicted RBP14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 FAM177A1Q8N128 213 aaPredicted RBP14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 RUFY1Q96T51 708 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 EHD4Q9H223 541 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 SWAP70Q9UH65 585 aa14.05□□□□□ -0.16
RTFDC1-207ENST00000477573 GPR75-ASB3A0A0A6YYF3 556 aa14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 TARSL2A2RTX5 802 aaKnown RBP14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 CEP104O60308 925 aa14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 PFKFB2O60825 505 aa14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 ZNF189O75820 626 aaPredicted RBP14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 CHGBP05060 677 aa14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 VIMP08670 466 aaKnown RBP14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 ALDH3A1P30838 453 aa14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 IFT88Q13099 833 aa14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 LACTB2Q53H82 288 aaPredicted RBP14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 TBC1D9BQ66K14 1250 aa14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 TPTE2Q6XPS3 522 aa14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 BICDL1Q6ZP65 573 aa14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 CCDC148Q8NFR7 591 aa14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 HDAC6Q9UBN7 1215 aa14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 PUF60Q9UHX1 559 aaKnown RBP14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 ATP8A1Q9Y2Q0 1164 aa14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 ASB3Q9Y575 518 aa14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 AKAP11Q9UKA4 1901 aa14.04□□□□□ -0.16
RTFDC1-207ENST00000477573 LRRD1A4D1F6 860 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 AGPSO00116 658 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 KIF4AO95239 1232 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 ANP32DO95626 131 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 CYP21A2P08686 494 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 RHOXF2BP0C7M4 288 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 ENOX2Q16206 610 aaKnown RBP14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 EMC10Q5UCC4 262 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 ZNF473Q8WTR7 871 aaKnown RBP14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 OSBP2Q969R2 916 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 SLC35B4Q969S0 331 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 STAMBPL1Q96FJ0 436 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 RHOXF2Q9BQY4 288 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 ZSWIM4Q9H7M6 989 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 ITGB1BP2Q9UKP3 347 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 TAF1LQ8IZX4 1826 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 TMEM221A6NGB7 291 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 HARSP12081 509 aaKnown RBP14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 RFC4P35249 363 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 PSMC4P43686 418 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 PHKA1P46020 1223 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 GNAQP50148 359 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 POSTNQ15063 836 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 PABPC1LQ4VXU2 614 aaKnown RBP14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 CCDC92Q53HC0 331 aaPredicted RBP14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 TRAPPC3LQ5T215 181 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 TMEM139Q8IV31 216 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 IQCF2Q8IXL9 164 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 ELOA2Q8IYF1 753 aaPredicted RBP14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 NLRP3Q96P20 1036 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 SLC5A4Q9NY91 659 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 TMCO1Q9UM00 188 aa14.03□□□□□ -0.16
RTFDC1-207ENST00000477573 INHBCP55103 352 aa14.02□□□□□ -0.16
RTFDC1-207ENST00000477573 CHRNDQ07001 517 aa14.02□□□□□ -0.16
RTFDC1-207ENST00000477573 PPP1R15BQ5SWA1 713 aa14.02□□□□□ -0.16
RTFDC1-207ENST00000477573 KLHL10Q6JEL2 608 aa14.02□□□□□ -0.16
RTFDC1-207ENST00000477573 FAM196AQ6ZSG2 479 aa14.02□□□□□ -0.16
RTFDC1-207ENST00000477573 SYCP3Q8IZU3 236 aa14.02□□□□□ -0.16
RTFDC1-207ENST00000477573 LSM14AQ8ND56 463 aaKnown RBP14.02□□□□□ -0.16
RTFDC1-207ENST00000477573 ZNF570Q96NI8 536 aa14.02□□□□□ -0.16
RTFDC1-207ENST00000477573 HAUS2Q9NVX0 235 aa14.02□□□□□ -0.16
RTFDC1-207ENST00000477573 ATXN10Q9UBB4 475 aa14.02□□□□□ -0.16
RTFDC1-207ENST00000477573 ABCF2Q9UG63 623 aa14.02□□□□□ -0.16
RTFDC1-207ENST00000477573 MYO1BO43795 1136 aa14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 SSBP05455 408 aaKnown RBP eCLIP14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 ADRA2BP18089 450 aa14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 ADD2P35612 726 aa14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 CUL4BQ13620 913 aa14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 UBE3CQ15386 1083 aa14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 ME3Q16798 604 aa14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 KIAA0753Q2KHM9 967 aa14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 SLC9C2Q5TAH2 1124 aa14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 PI16Q6UXB8 463 aa14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 MYOCDQ8IZQ8 938 aa14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 SPATA5Q8NB90 893 aa14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 TEKT4Q8WW24 435 aa14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 SRP68Q9UHB9 627 aaKnown RBP14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 BARX2Q9UMQ3 279 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms