RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 TACC1O75410 805 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 ABL1P00519 1130 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 TCP1P17987 556 aaKnown RBP15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 CDC25AP30304 524 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 C1QTNF8P60827 252 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 GLE1Q53GS7 698 aaKnown RBP15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 CCDC178Q5BJE1 867 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 TTI2Q6NXR4 508 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 EMBQ6PCB8 327 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 FAM196AQ6ZSG2 479 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 ZSCAN29Q8IWY8 852 aaPredicted RBP15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 C4orf32Q8N8J7 132 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 PIGBQ92521 554 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 SECISBP2LQ93073 1101 aaKnown RBP15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 TRIM47Q96LD4 638 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 RIOK1Q9BRS2 568 aaKnown RBP15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 KBTBD4Q9NVX7 518 aa15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.12■□□□□ 0.01
HLA-DMA-208ENST00000477541 SPATA31A5Q5VU36 1347 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 SPATA31A7Q8IWB4 1347 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 GOLGA6CA6NDK9 693 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 MINDY4BA8MYZ0 360 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 LCA5LO95447 670 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 GOLGA6DP0CG33 693 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 CCNE1P24864 410 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 ORC2Q13416 577 aaPredicted RBP15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 SPA17Q15506 151 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 DTHD1Q6ZMT9 781 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 PIK3AP1Q6ZUJ8 805 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 SH3GL2Q99962 352 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 GOLGA6AQ9NYA3 693 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 RNF14Q9UBS8 474 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 TSKSQ9UJT2 592 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 KIAA1551Q9HCM1 1747 aa15.11■□□□□ 0.01
HLA-DMA-208ENST00000477541 VGLL3A8MV65 326 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 PRDM1O75626 825 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 TRIM21P19474 475 aaKnown RBP15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 GNAQP50148 359 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 EPHB4P54760 987 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 FKBP15Q5T1M5 1219 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 FOXR2Q6PJQ5 311 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 TADA2BQ86TJ2 420 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 DZIP3Q86Y13 1208 aaKnown RBP15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 BLIDQ8IZY5 108 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 ALS2CR12Q96Q35 445 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 TUBGCP2Q9BSJ2 902 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 EDEM3Q9BZQ6 932 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 NHEJ1Q9H9Q4 299 aaPredicted RBP15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 BTG4Q9NY30 223 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 ASAP1Q9ULH1 1129 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 SNX12Q9UMY4 172 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 PCDHA4Q9UN74 947 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 GDAQ9Y2T3 454 aa15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 BAZ2AQ9UIF9 1905 aaKnown RBP15.1■□□□□ 0.01
HLA-DMA-208ENST00000477541 COL14A1Q05707 1796 aaKnown RBP15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 SHTN1A0MZ66 631 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 WNT7AO00755 349 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 KLRC4O43908 158 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 PHACTR2O75167 634 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 TRIM37O94972 964 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 IDEP14735 1019 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 GGCXP38435 758 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 SKOR1P84550 965 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 IL17AQ16552 155 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 MIGA1Q8NAN2 632 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 HELBQ8NG08 1087 aaPredicted RBP15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 CAVIN3Q969G5 261 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 CASZ1Q86V15 1759 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 EBAG9O00559 213 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 FGFR1OPO95684 399 aaKnown RBP15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 APBA3O96018 575 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 MCM7P33993 719 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 USP8P40818 1118 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 BCAMP50895 628 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 SBK1Q52WX2 424 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 SRBD1Q8N5C6 995 aaKnown RBP15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 C1orf131Q8NDD1 294 aaKnown RBP15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 P2RX5Q93086 422 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 HDAC6Q9UBN7 1215 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 TRIM10Q9UDY6 481 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 HYOU1Q9Y4L1 999 aa15.09■□□□□ 0.01
HLA-DMA-208ENST00000477541 SRRM3A6NNA2 597 aaPredicted RBP15.08■□□□□ 0
HLA-DMA-208ENST00000477541 AGPSO00116 658 aa15.08■□□□□ 0
HLA-DMA-208ENST00000477541 ENC1O14682 589 aa15.08■□□□□ 0
HLA-DMA-208ENST00000477541 ZEB2O60315 1214 aa15.08■□□□□ 0
HLA-DMA-208ENST00000477541 TFRCP02786 760 aaKnown RBP15.08■□□□□ 0
HLA-DMA-208ENST00000477541 UBA7P41226 1012 aa15.08■□□□□ 0
HLA-DMA-208ENST00000477541 AMPD3Q01432 767 aa15.08■□□□□ 0
HLA-DMA-208ENST00000477541 TBC1D8BQ0IIM8 1120 aa15.08■□□□□ 0
HLA-DMA-208ENST00000477541 UBE4AQ14139 1066 aa15.08■□□□□ 0
HLA-DMA-208ENST00000477541 CSGALNACT2Q8N6G5 542 aa15.08■□□□□ 0
HLA-DMA-208ENST00000477541 ANKS1AQ92625 1134 aa15.08■□□□□ 0
HLA-DMA-208ENST00000477541 STAMQ92783 540 aa15.08■□□□□ 0
HLA-DMA-208ENST00000477541 CAPS2Q9BXY5 557 aa15.08■□□□□ 0
HLA-DMA-208ENST00000477541 ATP8A2Q9NTI2 1148 aa15.08■□□□□ 0
HLA-DMA-208ENST00000477541 ARPP21Q9UBL0 812 aaPredicted RBP15.08■□□□□ 0
HLA-DMA-208ENST00000477541 PLAGL2Q9UPG8 496 aa15.08■□□□□ 0
HLA-DMA-208ENST00000477541 PJA2O43164 708 aa15.07■□□□□ 0
HLA-DMA-208ENST00000477541 IRAK1P51617 712 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms