RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 CCDC96Q2M329 555 aa20.15■□□□□ 0.82
SMARCD3-210ENST00000477169 CCDC174Q6PII3 467 aa20.15■□□□□ 0.82
SMARCD3-210ENST00000477169 RASGRP2Q7LDG7 609 aa20.15■□□□□ 0.82
SMARCD3-210ENST00000477169 IQCA1Q86XH1 822 aa20.15■□□□□ 0.82
SMARCD3-210ENST00000477169 TDHQ8IZJ6 230 aa20.15■□□□□ 0.82
SMARCD3-210ENST00000477169 FAM133AQ8N9E0 248 aa20.15■□□□□ 0.82
SMARCD3-210ENST00000477169 FERMT2Q96AC1 680 aa20.15■□□□□ 0.82
SMARCD3-210ENST00000477169 A1CFQ9NQ94 594 aaKnown RBP20.15■□□□□ 0.82
SMARCD3-210ENST00000477169 ZHX1Q9UKY1 873 aaPredicted RBP20.15■□□□□ 0.82
SMARCD3-210ENST00000477169 SNX14Q9Y5W7 946 aa20.15■□□□□ 0.82
SMARCD3-210ENST00000477169 ADAMTS4O75173 837 aa20.14■□□□□ 0.81
SMARCD3-210ENST00000477169 ALAS1P13196 640 aa20.14■□□□□ 0.81
SMARCD3-210ENST00000477169 MDM2Q00987 491 aaPredicted RBP20.14■□□□□ 0.81
SMARCD3-210ENST00000477169 ADCK5Q3MIX3 580 aa20.14■□□□□ 0.81
SMARCD3-210ENST00000477169 LRIT3Q3SXY7 679 aa20.14■□□□□ 0.81
SMARCD3-210ENST00000477169 ARMCX2Q7L311 632 aa20.14■□□□□ 0.81
SMARCD3-210ENST00000477169 ZSCAN10Q96SZ4 725 aaPredicted RBP20.14■□□□□ 0.81
SMARCD3-210ENST00000477169 TSEN34Q9BSV6 310 aaKnown RBP20.14■□□□□ 0.81
SMARCD3-210ENST00000477169 SOX1O00570 391 aaPredicted RBP20.13■□□□□ 0.81
SMARCD3-210ENST00000477169 DUSP11O75319 330 aaKnown RBP20.13■□□□□ 0.81
SMARCD3-210ENST00000477169 ICAM1P05362 532 aa20.13■□□□□ 0.81
SMARCD3-210ENST00000477169 ANTXR2P58335 489 aa20.13■□□□□ 0.81
SMARCD3-210ENST00000477169 SNAP25P60880 206 aa20.13■□□□□ 0.81
SMARCD3-210ENST00000477169 CNTN2Q02246 1040 aa20.13■□□□□ 0.81
SMARCD3-210ENST00000477169 KRT32Q14532 448 aa20.13■□□□□ 0.81
SMARCD3-210ENST00000477169 CCDC178Q5BJE1 867 aa20.13■□□□□ 0.81
SMARCD3-210ENST00000477169 TTBK2Q6IQ55 1244 aa20.13■□□□□ 0.81
SMARCD3-210ENST00000477169 CCDC144CPQ8IYA2 1237 aa20.13■□□□□ 0.81
SMARCD3-210ENST00000477169 LBHD1Q9BQE6 289 aaPredicted RBP20.13■□□□□ 0.81
SMARCD3-210ENST00000477169 RANBP17Q9H2T7 1088 aaKnown RBP20.13■□□□□ 0.81
SMARCD3-210ENST00000477169 LAMA3Q16787 3333 aa20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 ASB14A6NK59 587 aa20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 PDHBP11177 359 aa20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 SLC16A2P36021 539 aa20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 TRIM60Q495X7 471 aa20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 SYDE2Q5VT97 1194 aa20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 CHST3Q7LGC8 479 aa20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 DGKHQ86XP1 1220 aa20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 ENAHQ8N8S7 591 aaPredicted RBP20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 KLHDC9Q8NEP7 349 aa20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 ANKS1AQ92625 1134 aa20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 LENG1Q96BZ8 264 aaPredicted RBP20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 NEK1Q96PY6 1258 aa20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 UBAC1Q9BSL1 405 aa20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 CCPG1Q9ULG6 757 aa20.12■□□□□ 0.81
SMARCD3-210ENST00000477169 TNKSO95271 1327 aa20.11■□□□□ 0.81
SMARCD3-210ENST00000477169 SYNRGQ9UMZ2 1314 aa20.11■□□□□ 0.81
SMARCD3-210ENST00000477169 A0A1W2PQ45 241 aaPredicted RBP20.11■□□□□ 0.81
SMARCD3-210ENST00000477169 A0A1W2PQY0 241 aa20.11■□□□□ 0.81
SMARCD3-210ENST00000477169 SOWAHBA6NEL2 793 aa20.11■□□□□ 0.81
SMARCD3-210ENST00000477169 SEC23AQ15436 765 aa20.11■□□□□ 0.81
SMARCD3-210ENST00000477169 CCDC144BQ3MJ40 725 aa20.11■□□□□ 0.81
SMARCD3-210ENST00000477169 MUM1L1Q5H9M0 696 aa20.11■□□□□ 0.81
SMARCD3-210ENST00000477169 GPR153Q6NV75 609 aa20.11■□□□□ 0.81
SMARCD3-210ENST00000477169 LRCH3Q96II8 777 aa20.11■□□□□ 0.81
SMARCD3-210ENST00000477169 KATNBL1Q9H079 304 aa20.11■□□□□ 0.81
SMARCD3-210ENST00000477169 GPCPD1Q9NPB8 672 aa20.11■□□□□ 0.81
SMARCD3-210ENST00000477169 CYP39A1Q9NYL5 469 aa20.11■□□□□ 0.81
SMARCD3-210ENST00000477169 MCM3APO60318 1980 aa20.1■□□□□ 0.81
SMARCD3-210ENST00000477169 FRMPD2Q68DX3 1309 aaPredicted RBP20.1■□□□□ 0.81
SMARCD3-210ENST00000477169 MOXD2PA6NHM9 499 aa20.1■□□□□ 0.81
SMARCD3-210ENST00000477169 SNHG28P0DPA3 235 aa20.1■□□□□ 0.81
SMARCD3-210ENST00000477169 MCM5P33992 734 aa20.1■□□□□ 0.81
SMARCD3-210ENST00000477169 ACLYP53396 1101 aa20.1■□□□□ 0.81
SMARCD3-210ENST00000477169 CCSAPQ6IQ19 270 aaPredicted RBP20.1■□□□□ 0.81
SMARCD3-210ENST00000477169 NUP133Q8WUM0 1156 aa20.1■□□□□ 0.81
SMARCD3-210ENST00000477169 SPC25Q9HBM1 224 aa20.1■□□□□ 0.81
SMARCD3-210ENST00000477169 PNMA2Q9UL42 364 aa20.1■□□□□ 0.81
SMARCD3-210ENST00000477169 IFIT3O14879 490 aaKnown RBP20.09■□□□□ 0.81
SMARCD3-210ENST00000477169 PRC1O43663 620 aa20.09■□□□□ 0.81
SMARCD3-210ENST00000477169 CST5P28325 142 aaPredicted RBP20.09■□□□□ 0.81
SMARCD3-210ENST00000477169 GJA9P57773 515 aa20.09■□□□□ 0.81
SMARCD3-210ENST00000477169 TLE2Q04725 743 aa20.09■□□□□ 0.81
SMARCD3-210ENST00000477169 ZNF543Q08ER8 600 aa20.09■□□□□ 0.81
SMARCD3-210ENST00000477169 KCNA10Q16322 511 aa20.09■□□□□ 0.81
SMARCD3-210ENST00000477169 IGDCC4Q8TDY8 1250 aa20.09■□□□□ 0.81
SMARCD3-210ENST00000477169 JAKMIP1Q96N16 626 aaKnown RBP20.09■□□□□ 0.81
SMARCD3-210ENST00000477169 ADCY6O43306 1168 aa20.08■□□□□ 0.81
SMARCD3-210ENST00000477169 EXOSC10Q01780 885 aaKnown RBP20.08■□□□□ 0.81
SMARCD3-210ENST00000477169 GPATCH4Q5T3I0 446 aaKnown RBP20.08■□□□□ 0.81
SMARCD3-210ENST00000477169 NSMFQ6X4W1 530 aa20.08■□□□□ 0.81
SMARCD3-210ENST00000477169 PCSK9Q8NBP7 692 aaKnown RBP20.08■□□□□ 0.81
SMARCD3-210ENST00000477169 MTA3Q9BTC8 594 aa20.08■□□□□ 0.81
SMARCD3-210ENST00000477169 UPF3AQ9H1J1 476 aaKnown RBP20.08■□□□□ 0.81
SMARCD3-210ENST00000477169 PRDM5Q9NQX1 630 aaPredicted RBP20.08■□□□□ 0.81
SMARCD3-210ENST00000477169 STARD7Q9NQZ5 370 aa20.08■□□□□ 0.81
SMARCD3-210ENST00000477169 PDLIM7Q9NR12 457 aa20.08■□□□□ 0.81
SMARCD3-210ENST00000477169 C6orf222P0C671 652 aaPredicted RBP20.07■□□□□ 0.8
SMARCD3-210ENST00000477169 NKX3-2P78367 333 aa20.07■□□□□ 0.8
SMARCD3-210ENST00000477169 SART3Q15020 963 aaKnown RBP20.07■□□□□ 0.8
SMARCD3-210ENST00000477169 TMEM67Q5HYA8 995 aa20.07■□□□□ 0.8
SMARCD3-210ENST00000477169 IFIT1BQ5T764 474 aaKnown RBP20.07■□□□□ 0.8
SMARCD3-210ENST00000477169 DHX32Q7L7V1 743 aaKnown RBP20.07■□□□□ 0.8
SMARCD3-210ENST00000477169 TMEM87BQ96K49 555 aa20.07■□□□□ 0.8
SMARCD3-210ENST00000477169 TOX2Q96NM4 488 aa20.07■□□□□ 0.8
SMARCD3-210ENST00000477169 KAT14Q9H8E8 782 aa20.07■□□□□ 0.8
SMARCD3-210ENST00000477169 SENP2Q9HC62 589 aa20.07■□□□□ 0.8
SMARCD3-210ENST00000477169 GPHNQ9NQX3 736 aaPredicted RBP20.07■□□□□ 0.8
SMARCD3-210ENST00000477169 ASTN1O14525 1302 aa20.06■□□□□ 0.8
SMARCD3-210ENST00000477169 ELP1O95163 1332 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms