RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 A0A1W2PPC1 479 aa18.23■□□□□ 0.51
CPSF3-203ENST00000475482 RARBP10826 455 aa18.23■□□□□ 0.51
CPSF3-203ENST00000475482 BMP8BP34820 402 aa18.23■□□□□ 0.51
CPSF3-203ENST00000475482 SNX17Q15036 470 aa18.23■□□□□ 0.51
CPSF3-203ENST00000475482 MUM1L1Q5H9M0 696 aa18.23■□□□□ 0.51
CPSF3-203ENST00000475482 CCDC174Q6PII3 467 aa18.23■□□□□ 0.51
CPSF3-203ENST00000475482 IQCA1Q86XH1 822 aa18.23■□□□□ 0.51
CPSF3-203ENST00000475482 ZKSCAN3Q9BRR0 538 aa18.23■□□□□ 0.51
CPSF3-203ENST00000475482 CNNM2Q9H8M5 875 aa18.23■□□□□ 0.51
CPSF3-203ENST00000475482 HOMER2Q9NSB8 354 aa18.23■□□□□ 0.51
CPSF3-203ENST00000475482 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.23■□□□□ 0.51
CPSF3-203ENST00000475482 LAMA3Q16787 3333 aa18.23■□□□□ 0.51
CPSF3-203ENST00000475482 FRMPD2Q68DX3 1309 aaPredicted RBP18.23■□□□□ 0.51
CPSF3-203ENST00000475482 SOWAHBA6NEL2 793 aa18.22■□□□□ 0.51
CPSF3-203ENST00000475482 ADAMTS4O75173 837 aa18.22■□□□□ 0.51
CPSF3-203ENST00000475482 ALAS1P13196 640 aa18.22■□□□□ 0.51
CPSF3-203ENST00000475482 CNTN2Q02246 1040 aa18.22■□□□□ 0.51
CPSF3-203ENST00000475482 C1orf53Q5VUE5 145 aa18.22■□□□□ 0.51
CPSF3-203ENST00000475482 ARMCX2Q7L311 632 aa18.22■□□□□ 0.51
CPSF3-203ENST00000475482 ENAHQ8N8S7 591 aaPredicted RBP18.22■□□□□ 0.51
CPSF3-203ENST00000475482 ZSCAN10Q96SZ4 725 aaPredicted RBP18.22■□□□□ 0.51
CPSF3-203ENST00000475482 KRT23Q9C075 422 aa18.22■□□□□ 0.51
CPSF3-203ENST00000475482 ABHD16BQ9H3Z7 469 aa18.22■□□□□ 0.51
CPSF3-203ENST00000475482 GPCPD1Q9NPB8 672 aa18.22■□□□□ 0.51
CPSF3-203ENST00000475482 XPNPEP3Q9NQH7 507 aa18.22■□□□□ 0.51
CPSF3-203ENST00000475482 CYP39A1Q9NYL5 469 aa18.22■□□□□ 0.51
CPSF3-203ENST00000475482 CCPG1Q9ULG6 757 aa18.22■□□□□ 0.51
CPSF3-203ENST00000475482 ZMYND8Q9ULU4 1186 aaPredicted RBP18.22■□□□□ 0.51
CPSF3-203ENST00000475482 PHF24Q9UPV7 400 aa18.22■□□□□ 0.51
CPSF3-203ENST00000475482 ASTN1O14525 1302 aa18.22■□□□□ 0.51
CPSF3-203ENST00000475482 KBTBD13C9JR72 458 aa18.21■□□□□ 0.51
CPSF3-203ENST00000475482 POTEB2H3BUK9 544 aa18.21■□□□□ 0.51
CPSF3-203ENST00000475482 HMGB1P09429 215 aaKnown RBP18.21■□□□□ 0.51
CPSF3-203ENST00000475482 NEK4P51957 841 aa18.21■□□□□ 0.51
CPSF3-203ENST00000475482 ACVR2BQ13705 512 aa18.21■□□□□ 0.51
CPSF3-203ENST00000475482 GPATCH4Q5T3I0 446 aaKnown RBP18.21■□□□□ 0.51
CPSF3-203ENST00000475482 SLC39A5Q6ZMH5 540 aa18.21■□□□□ 0.51
CPSF3-203ENST00000475482 CCDC144CPQ8IYA2 1237 aa18.21■□□□□ 0.51
CPSF3-203ENST00000475482 PNMA1Q8ND90 353 aa18.21■□□□□ 0.51
CPSF3-203ENST00000475482 KLHDC9Q8NEP7 349 aa18.21■□□□□ 0.51
CPSF3-203ENST00000475482 PNMA2Q9UL42 364 aa18.21■□□□□ 0.51
CPSF3-203ENST00000475482 FAM184BQ9ULE4 1060 aa18.21■□□□□ 0.51
CPSF3-203ENST00000475482 CYP46A1Q9Y6A2 500 aa18.21■□□□□ 0.51
CPSF3-203ENST00000475482 SZT2Q5T011 3432 aa18.21■□□□□ 0.51
CPSF3-203ENST00000475482 WDR19Q8NEZ3 1342 aa18.21■□□□□ 0.51
CPSF3-203ENST00000475482 LRRC37A2A6NM11 1700 aa18.2■□□□□ 0.5
CPSF3-203ENST00000475482 DUSP11O75319 330 aaKnown RBP18.2■□□□□ 0.5
CPSF3-203ENST00000475482 PGK1P00558 417 aa18.2■□□□□ 0.5
CPSF3-203ENST00000475482 CYP21A2P08686 494 aa18.2■□□□□ 0.5
CPSF3-203ENST00000475482 SEC23AQ15436 765 aa18.2■□□□□ 0.5
CPSF3-203ENST00000475482 CCSAPQ6IQ19 270 aaPredicted RBP18.2■□□□□ 0.5
CPSF3-203ENST00000475482 RASEFQ8IZ41 740 aa18.2■□□□□ 0.5
CPSF3-203ENST00000475482 MORC4Q8TE76 937 aa18.2■□□□□ 0.5
CPSF3-203ENST00000475482 CLEC4DQ8WXI8 215 aa18.2■□□□□ 0.5
CPSF3-203ENST00000475482 JAKMIP1Q96N16 626 aaKnown RBP18.2■□□□□ 0.5
CPSF3-203ENST00000475482 TNKSO95271 1327 aa18.2■□□□□ 0.5
CPSF3-203ENST00000475482 ASB14A6NK59 587 aa18.19■□□□□ 0.5
CPSF3-203ENST00000475482 ADCY6O43306 1168 aa18.19■□□□□ 0.5
CPSF3-203ENST00000475482 SYN1P17600 705 aa18.19■□□□□ 0.5
CPSF3-203ENST00000475482 CASTP20810 708 aaKnown RBP18.19■□□□□ 0.5
CPSF3-203ENST00000475482 ADCYAP1R1P41586 468 aa18.19■□□□□ 0.5
CPSF3-203ENST00000475482 NKX3-2P78367 333 aa18.19■□□□□ 0.5
CPSF3-203ENST00000475482 BLOC1S2Q6QNY1 142 aa18.19■□□□□ 0.5
CPSF3-203ENST00000475482 RNF180Q86T96 592 aa18.19■□□□□ 0.5
CPSF3-203ENST00000475482 LENG1Q96BZ8 264 aaPredicted RBP18.19■□□□□ 0.5
CPSF3-203ENST00000475482 TSEN34Q9BSV6 310 aaKnown RBP18.19■□□□□ 0.5
CPSF3-203ENST00000475482 SYNRGQ9UMZ2 1314 aa18.19■□□□□ 0.5
CPSF3-203ENST00000475482 MYH6P13533 1939 aa18.18■□□□□ 0.5
CPSF3-203ENST00000475482 K7ELQ4 463 aaPredicted RBP18.18■□□□□ 0.5
CPSF3-203ENST00000475482 NFIBO00712 420 aa18.18■□□□□ 0.5
CPSF3-203ENST00000475482 CST5P28325 142 aaPredicted RBP18.18■□□□□ 0.5
CPSF3-203ENST00000475482 MAGEA10P43363 369 aaPredicted RBP18.18■□□□□ 0.5
CPSF3-203ENST00000475482 ATN1P54259 1190 aaPredicted RBP18.18■□□□□ 0.5
CPSF3-203ENST00000475482 RTP1P59025 263 aa18.18■□□□□ 0.5
CPSF3-203ENST00000475482 CCDC144BQ3MJ40 725 aa18.18■□□□□ 0.5
CPSF3-203ENST00000475482 CYB5R4Q7L1T6 521 aa18.18■□□□□ 0.5
CPSF3-203ENST00000475482 UPF3AQ9H1J1 476 aaKnown RBP18.18■□□□□ 0.5
CPSF3-203ENST00000475482 KAT14Q9H8E8 782 aa18.18■□□□□ 0.5
CPSF3-203ENST00000475482 ZSWIM6Q9HCJ5 1215 aa18.18■□□□□ 0.5
CPSF3-203ENST00000475482 ZHX1Q9UKY1 873 aaPredicted RBP18.18■□□□□ 0.5
CPSF3-203ENST00000475482 LTBP2Q14767 1821 aa18.17■□□□□ 0.5
CPSF3-203ENST00000475482 LOC102724159A0A0B4J2E5 919 aa18.17■□□□□ 0.5
CPSF3-203ENST00000475482 GOLGA8HP0CJ92 632 aa18.17■□□□□ 0.5
CPSF3-203ENST00000475482 PWP2Q15269 919 aaKnown RBP18.17■□□□□ 0.5
CPSF3-203ENST00000475482 ANKRD1Q15327 319 aa18.17■□□□□ 0.5
CPSF3-203ENST00000475482 ASPRV1Q53RT3 343 aa18.17■□□□□ 0.5
CPSF3-203ENST00000475482 RUFY3Q7L099 469 aa18.17■□□□□ 0.5
CPSF3-203ENST00000475482 NEK1Q96PY6 1258 aa18.17■□□□□ 0.5
CPSF3-203ENST00000475482 CTAGE5O15320 804 aa18.16■□□□□ 0.5
CPSF3-203ENST00000475482 GJA9P57773 515 aa18.16■□□□□ 0.5
CPSF3-203ENST00000475482 TRDNQ13061 729 aa18.16■□□□□ 0.5
CPSF3-203ENST00000475482 BAATQ14032 418 aaPredicted RBP18.16■□□□□ 0.5
CPSF3-203ENST00000475482 NSMFQ6X4W1 530 aa18.16■□□□□ 0.5
CPSF3-203ENST00000475482 RGS22Q8NE09 1264 aa18.16■□□□□ 0.5
CPSF3-203ENST00000475482 UBAC1Q9BSL1 405 aa18.16■□□□□ 0.5
CPSF3-203ENST00000475482 UBA5Q9GZZ9 404 aa18.16■□□□□ 0.5
CPSF3-203ENST00000475482 MAF1Q9H063 256 aa18.16■□□□□ 0.5
CPSF3-203ENST00000475482 CPVLQ9H3G5 476 aa18.16■□□□□ 0.5
CPSF3-203ENST00000475482 TAF6LQ9Y6J9 622 aa18.16■□□□□ 0.5
CPSF3-203ENST00000475482 MYADML2A6NDP7 307 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms