RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 PNMA6FA0A0J9YX94 578 aa18.25■□□□□ 0.51
COL1A1-204ENST00000474644 STRNO43815 780 aa18.25■□□□□ 0.51
COL1A1-204ENST00000474644 FCER1AP12319 257 aa18.25■□□□□ 0.51
COL1A1-204ENST00000474644 ADORA2AP29274 412 aa18.25■□□□□ 0.51
COL1A1-204ENST00000474644 KCTD2Q14681 263 aa18.25■□□□□ 0.51
COL1A1-204ENST00000474644 MUM1L1Q5H9M0 696 aa18.25■□□□□ 0.51
COL1A1-204ENST00000474644 MMP19Q99542 508 aa18.25■□□□□ 0.51
COL1A1-204ENST00000474644 NUDT12Q9BQG2 462 aa18.25■□□□□ 0.51
COL1A1-204ENST00000474644 AMNQ9BXJ7 453 aa18.25■□□□□ 0.51
COL1A1-204ENST00000474644 ABCB11O95342 1321 aa18.24■□□□□ 0.51
COL1A1-204ENST00000474644 PFKFB2O60825 505 aa18.24■□□□□ 0.51
COL1A1-204ENST00000474644 LARGE1O95461 756 aa18.24■□□□□ 0.51
COL1A1-204ENST00000474644 MAP2K5Q13163 448 aa18.24■□□□□ 0.51
COL1A1-204ENST00000474644 IRF5Q13568 498 aa18.24■□□□□ 0.51
COL1A1-204ENST00000474644 PKN2Q16513 984 aaKnown RBP18.24■□□□□ 0.51
COL1A1-204ENST00000474644 CLEC4DQ8WXI8 215 aa18.24■□□□□ 0.51
COL1A1-204ENST00000474644 APBA2Q99767 749 aa18.24■□□□□ 0.51
COL1A1-204ENST00000474644 MCOLN1Q9GZU1 580 aa18.24■□□□□ 0.51
COL1A1-204ENST00000474644 SEC63Q9UGP8 760 aaKnown RBP18.24■□□□□ 0.51
COL1A1-204ENST00000474644 hCG_1642624A0A1W2PR95 340 aa18.23■□□□□ 0.51
COL1A1-204ENST00000474644 NFIBO00712 420 aa18.23■□□□□ 0.51
COL1A1-204ENST00000474644 RGS2P41220 211 aa18.23■□□□□ 0.51
COL1A1-204ENST00000474644 SCRN1Q12765 414 aa18.23■□□□□ 0.51
COL1A1-204ENST00000474644 NTRK3Q16288 839 aa18.23■□□□□ 0.51
COL1A1-204ENST00000474644 ME3Q16798 604 aa18.23■□□□□ 0.51
COL1A1-204ENST00000474644 FBXO46Q6PJ61 603 aaPredicted RBP18.23■□□□□ 0.51
COL1A1-204ENST00000474644 ANKRD35Q8N283 1001 aa18.23■□□□□ 0.51
COL1A1-204ENST00000474644 RAET1EQ8TD07 263 aa18.23■□□□□ 0.51
COL1A1-204ENST00000474644 SLKQ9H2G2 1235 aaPredicted RBP18.23■□□□□ 0.51
COL1A1-204ENST00000474644 A1CFQ9NQ94 594 aaKnown RBP18.23■□□□□ 0.51
COL1A1-204ENST00000474644 PCDHA1Q9Y5I3 950 aa18.23■□□□□ 0.51
COL1A1-204ENST00000474644 PDE4DIPQ5VU43 2346 aa18.22■□□□□ 0.51
COL1A1-204ENST00000474644 CCDC85CA6NKD9 419 aa18.22■□□□□ 0.51
COL1A1-204ENST00000474644 ST18O60284 1047 aa18.22■□□□□ 0.51
COL1A1-204ENST00000474644 PGK2P07205 417 aa18.22■□□□□ 0.51
COL1A1-204ENST00000474644 IFNAR1P17181 557 aa18.22■□□□□ 0.51
COL1A1-204ENST00000474644 CYP2B6P20813 491 aa18.22■□□□□ 0.51
COL1A1-204ENST00000474644 PFASO15067 1338 aa18.22■□□□□ 0.51
COL1A1-204ENST00000474644 COBLO75128 1261 aa18.21■□□□□ 0.51
COL1A1-204ENST00000474644 HOXC6P09630 235 aa18.21■□□□□ 0.51
COL1A1-204ENST00000474644 TRAF1Q13077 416 aa18.21■□□□□ 0.51
COL1A1-204ENST00000474644 NSMFQ6X4W1 530 aa18.21■□□□□ 0.51
COL1A1-204ENST00000474644 IL27Q8NEV9 243 aa18.21■□□□□ 0.51
COL1A1-204ENST00000474644 PHKBQ93100 1093 aa18.21■□□□□ 0.51
COL1A1-204ENST00000474644 GTF3C6Q969F1 213 aa18.21■□□□□ 0.51
COL1A1-204ENST00000474644 LIMCH1Q9UPQ0 1083 aa18.21■□□□□ 0.51
COL1A1-204ENST00000474644 MRPL11Q9Y3B7 192 aaKnown RBP18.21■□□□□ 0.51
COL1A1-204ENST00000474644 V9GY48 417 aaPredicted RBP18.21■□□□□ 0.51
COL1A1-204ENST00000474644 RBBP6Q7Z6E9 1792 aaKnown RBP18.2■□□□□ 0.5
COL1A1-204ENST00000474644 DNAJC25-GNG10A0A024R161 153 aa18.2■□□□□ 0.5
COL1A1-204ENST00000474644 CPLX1O14810 134 aa18.2■□□□□ 0.5
COL1A1-204ENST00000474644 OPLAHO14841 1288 aa18.2■□□□□ 0.5
COL1A1-204ENST00000474644 ADCY3O60266 1144 aa18.2■□□□□ 0.5
COL1A1-204ENST00000474644 PPFIA3O75145 1194 aa18.2■□□□□ 0.5
COL1A1-204ENST00000474644 XRCC5P13010 732 aaKnown RBP18.2■□□□□ 0.5
COL1A1-204ENST00000474644 SLC30A10Q6XR72 485 aa18.2■□□□□ 0.5
COL1A1-204ENST00000474644 DPP9Q86TI2 863 aa18.2■□□□□ 0.5
COL1A1-204ENST00000474644 NPLOC4Q8TAT6 608 aa18.2■□□□□ 0.5
COL1A1-204ENST00000474644 DDX11Q96FC9 970 aa18.2■□□□□ 0.5
COL1A1-204ENST00000474644 CYP39A1Q9NYL5 469 aa18.2■□□□□ 0.5
COL1A1-204ENST00000474644 HTTP42858 3142 aa18.19■□□□□ 0.5
COL1A1-204ENST00000474644 CD2BP2O95400 341 aaKnown RBP18.19■□□□□ 0.5
COL1A1-204ENST00000474644 ELNP15502 786 aa18.19■□□□□ 0.5
COL1A1-204ENST00000474644 ST3GAL1Q11201 340 aa18.19■□□□□ 0.5
COL1A1-204ENST00000474644 CCL14Q16627 93 aa18.19■□□□□ 0.5
COL1A1-204ENST00000474644 ZNF792Q3KQV3 632 aa18.19■□□□□ 0.5
COL1A1-204ENST00000474644 WWC2Q6AWC2 1192 aa18.19■□□□□ 0.5
COL1A1-204ENST00000474644 CPLX2Q6PUV4 134 aaKnown RBP18.19■□□□□ 0.5
COL1A1-204ENST00000474644 HEATR3Q7Z4Q2 680 aa18.19■□□□□ 0.5
COL1A1-204ENST00000474644 NECAB1Q8N987 351 aa18.19■□□□□ 0.5
COL1A1-204ENST00000474644 SLAIN1Q8ND83 568 aa18.19■□□□□ 0.5
COL1A1-204ENST00000474644 PXYLP1Q8TE99 480 aa18.19■□□□□ 0.5
COL1A1-204ENST00000474644 TRIB2Q92519 343 aa18.19■□□□□ 0.5
COL1A1-204ENST00000474644 GPKOWQ92917 476 aaPredicted RBP eCLIP18.19■□□□□ 0.5
COL1A1-204ENST00000474644 SLC26A6Q9BXS9 759 aa18.19■□□□□ 0.5
COL1A1-204ENST00000474644 RNF26Q9BY78 433 aaPredicted RBP18.19■□□□□ 0.5
COL1A1-204ENST00000474644 SLC5A4Q9NY91 659 aa18.19■□□□□ 0.5
COL1A1-204ENST00000474644 BAZ2BQ9UIF8 2168 aaKnown RBP18.19■□□□□ 0.5
COL1A1-204ENST00000474644 DOCK3Q8IZD9 2030 aa18.18■□□□□ 0.5
COL1A1-204ENST00000474644 MYH6P13533 1939 aa18.18■□□□□ 0.5
COL1A1-204ENST00000474644 PTPDC1A2A3K4 754 aa18.18■□□□□ 0.5
COL1A1-204ENST00000474644 POTEB2H3BUK9 544 aa18.18■□□□□ 0.5
COL1A1-204ENST00000474644 PRPF3O43395 683 aaKnown RBP18.18■□□□□ 0.5
COL1A1-204ENST00000474644 GRK4P32298 578 aa18.18■□□□□ 0.5
COL1A1-204ENST00000474644 BAATQ14032 418 aaPredicted RBP18.18■□□□□ 0.5
COL1A1-204ENST00000474644 PFKFB3Q16875 520 aaPredicted RBP18.18■□□□□ 0.5
COL1A1-204ENST00000474644 RNF207Q6ZRF8 634 aa18.18■□□□□ 0.5
COL1A1-204ENST00000474644 MCF2L2Q86YR7 1114 aa18.18■□□□□ 0.5
COL1A1-204ENST00000474644 RGS22Q8NE09 1264 aa18.18■□□□□ 0.5
COL1A1-204ENST00000474644 SH3TC2Q8TF17 1288 aa18.18■□□□□ 0.5
COL1A1-204ENST00000474644 MAML3Q96JK9 1138 aa18.18■□□□□ 0.5
COL1A1-204ENST00000474644 FGD4Q96M96 766 aa18.18■□□□□ 0.5
COL1A1-204ENST00000474644 FLRT1Q9NZU1 646 aa18.18■□□□□ 0.5
COL1A1-204ENST00000474644 RBM27Q9P2N5 1060 aaKnown RBP18.18■□□□□ 0.5
COL1A1-204ENST00000474644 SMCHD1A6NHR9 2005 aa18.18■□□□□ 0.5
COL1A1-204ENST00000474644 hCG_1984214I3L0E3 225 aa18.17■□□□□ 0.5
COL1A1-204ENST00000474644 CDKL5O76039 1030 aa18.17■□□□□ 0.5
COL1A1-204ENST00000474644 CTDNEP1O95476 244 aa18.17■□□□□ 0.5
COL1A1-204ENST00000474644 SCG2P13521 617 aa18.17■□□□□ 0.5
COL1A1-204ENST00000474644 CALML3P27482 149 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms