RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 ZNF536O15090 1300 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 MYH11P35749 1972 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 ESYT2A0FGR8 921 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 AOC2O75106 756 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 GNA11P29992 359 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 KRT2P35908 639 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 HTRA3P83110 453 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 KIF23Q02241 960 aaPredicted RBP9.58□□□□□ -0.88
CNN3-205ENST00000474409 PKP1Q13835 747 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 TMEM132BQ14DG7 1078 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 FOXD4L5Q5VV16 416 aaPredicted RBP9.58□□□□□ -0.88
CNN3-205ENST00000474409 TYW1BQ6NUM6 668 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 LBX2Q6XYB7 198 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 IFNL1Q8IU54 200 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 REPS2Q8NFH8 660 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 FBXO18Q8NFZ0 1043 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 BICD2Q8TD16 824 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 FOXD4L4Q8WXT5 416 aaPredicted RBP9.58□□□□□ -0.88
CNN3-205ENST00000474409 CUL5Q93034 780 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 AGBL1Q96MI9 1066 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 PTPN18Q99952 460 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 PHF20Q9BVI0 1012 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 C6orf50Q9HD87 102 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 GJB4Q9NTQ9 266 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 CHMP5Q9NZZ3 219 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 ADAMTS5Q9UNA0 930 aa9.58□□□□□ -0.88
CNN3-205ENST00000474409 MRPL11Q9Y3B7 192 aaKnown RBP9.58□□□□□ -0.88
CNN3-205ENST00000474409 SMCO2A6NFE2 343 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 ATP2A1O14983 1001 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 F13A1P00488 732 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 COPB2P35606 906 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 DDIT3P35638 169 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 STAT3P40763 770 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 GCLCP48506 637 aaPredicted RBP9.57□□□□□ -0.88
CNN3-205ENST00000474409 TKFCQ3LXA3 575 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 GALNT17Q6IS24 598 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 FERMT3Q86UX7 667 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 DIS3L2Q8IYB7 885 aaKnown RBP9.57□□□□□ -0.88
CNN3-205ENST00000474409 REM2Q8IYK8 340 aaPredicted RBP9.57□□□□□ -0.88
CNN3-205ENST00000474409 ANKRD13CQ8N6S4 541 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 RGS22Q8NE09 1264 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 SHISA4Q96DD7 197 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 SPATC1LQ9H0A9 340 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 GLT8D2Q9H1C3 349 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 ACAD9Q9H845 621 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 RNF146Q9NTX7 359 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 ZNF214Q9UL59 606 aaPredicted RBP9.57□□□□□ -0.88
CNN3-205ENST00000474409 PCDHA4Q9UN74 947 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 MTMR6Q9Y217 621 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 RABGAP1Q9Y3P9 1069 aa9.57□□□□□ -0.88
CNN3-205ENST00000474409 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 KAT6AQ92794 2004 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 BRD1O95696 1058 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 ALDH1A1P00352 501 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 ZSCAN22P10073 491 aaPredicted RBP9.56□□□□□ -0.88
CNN3-205ENST00000474409 HSPA6P17066 643 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 VEGFBP49765 207 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 MRPL12P52815 198 aaKnown RBP9.56□□□□□ -0.88
CNN3-205ENST00000474409 C1QTNF8P60827 252 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 ERVK-9P63128 1117 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 ERVK-24P63145 666 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 CCNA1P78396 465 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 WDR78Q5VTH9 848 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 NCAPG2Q86XI2 1143 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 MCF2L2Q86YR7 1114 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 CCAR1Q8IX12 1150 aaKnown RBP9.56□□□□□ -0.88
CNN3-205ENST00000474409 BLIDQ8IZY5 108 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 REXO1Q8N1G1 1221 aaKnown RBP9.56□□□□□ -0.88
CNN3-205ENST00000474409 DAGLBQ8NCG7 672 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 TRERF1Q96PN7 1200 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 ZIC5Q96T25 663 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 ZMYND12Q9H0C1 365 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 PSTPIP2Q9H939 334 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 ZFYVE28Q9HCC9 887 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 TXNRD2Q9NNW7 524 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 BTBD7Q9P203 1132 aa9.56□□□□□ -0.88
CNN3-205ENST00000474409 CCDC194A0A1B0GVG4 234 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 SPDYE3A6NKU9 549 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 KIF28PB7ZC32 967 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 NFIBO00712 420 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 PEX10O60683 326 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 CNMDO75829 334 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 SLC25A27O95847 323 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 CFBP00751 764 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 TM4SF4P48230 202 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 CRHR2Q13324 411 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 UBE2SQ16763 222 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 FAM110CQ1W6H9 321 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 NSMFQ6X4W1 530 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 BRAPQ7Z569 592 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 RIOX2Q8IUF8 465 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 CHST13Q8NET6 341 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 GPRC5AQ8NFJ5 357 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 RASGRP4Q8TDF6 673 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 FOXP1Q9H334 677 aaPredicted RBP9.55□□□□□ -0.88
CNN3-205ENST00000474409 ZSCAN16Q9H4T2 348 aaPredicted RBP9.55□□□□□ -0.88
CNN3-205ENST00000474409 EHMT1Q9H9B1 1298 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 RIC8AQ9NPQ8 531 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 FBXO40Q9UH90 709 aa9.55□□□□□ -0.88
CNN3-205ENST00000474409 CPA4Q9UI42 421 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms