RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 MRPL12P52815 198 aaKnown RBP21.74■■□□□ 1.07
CCDC171-206ENST00000474193 PTH1RQ03431 593 aa21.74■■□□□ 1.07
CCDC171-206ENST00000474193 MUM1L1Q5H9M0 696 aa21.74■■□□□ 1.07
CCDC171-206ENST00000474193 CYP39A1Q9NYL5 469 aa21.74■■□□□ 1.07
CCDC171-206ENST00000474193 PTPDC1A2A3K4 754 aa21.73■■□□□ 1.07
CCDC171-206ENST00000474193 DUSP11O75319 330 aaKnown RBP21.73■■□□□ 1.07
CCDC171-206ENST00000474193 PGK1P00558 417 aa21.73■■□□□ 1.07
CCDC171-206ENST00000474193 CYP21A2P08686 494 aa21.73■■□□□ 1.07
CCDC171-206ENST00000474193 SLC39A5Q6ZMH5 540 aa21.73■■□□□ 1.07
CCDC171-206ENST00000474193 NOL8Q76FK4 1167 aaKnown RBP21.73■■□□□ 1.07
CCDC171-206ENST00000474193 MAP4K1Q92918 833 aa21.73■■□□□ 1.07
CCDC171-206ENST00000474193 TSEN34Q9BSV6 310 aaKnown RBP21.73■■□□□ 1.07
CCDC171-206ENST00000474193 UBA5Q9GZZ9 404 aa21.73■■□□□ 1.07
CCDC171-206ENST00000474193 RBM27Q9P2N5 1060 aaKnown RBP21.73■■□□□ 1.07
CCDC171-206ENST00000474193 WDR19Q8NEZ3 1342 aa21.73■■□□□ 1.07
CCDC171-206ENST00000474193 A0A1W2PPC1 479 aa21.72■■□□□ 1.07
CCDC171-206ENST00000474193 IFIT3O14879 490 aaKnown RBP21.72■■□□□ 1.07
CCDC171-206ENST00000474193 SLC34A2O95436 690 aa21.72■■□□□ 1.07
CCDC171-206ENST00000474193 SYN1P17600 705 aa21.72■■□□□ 1.07
CCDC171-206ENST00000474193 CCDC144BQ3MJ40 725 aa21.72■■□□□ 1.07
CCDC171-206ENST00000474193 PCSK9Q8NBP7 692 aaKnown RBP21.72■■□□□ 1.07
CCDC171-206ENST00000474193 NUP133Q8WUM0 1156 aa21.72■■□□□ 1.07
CCDC171-206ENST00000474193 FERMT2Q96AC1 680 aa21.72■■□□□ 1.07
CCDC171-206ENST00000474193 LBHD1Q9BQE6 289 aaPredicted RBP21.72■■□□□ 1.07
CCDC171-206ENST00000474193 ATP11BQ9Y2G3 1177 aa21.72■■□□□ 1.07
CCDC171-206ENST00000474193 LOC102724159A0A0B4J2E5 919 aa21.71■■□□□ 1.07
CCDC171-206ENST00000474193 SOWAHBA6NEL2 793 aa21.71■■□□□ 1.07
CCDC171-206ENST00000474193 RTP1P59025 263 aa21.71■■□□□ 1.07
CCDC171-206ENST00000474193 BAATQ14032 418 aaPredicted RBP21.71■■□□□ 1.07
CCDC171-206ENST00000474193 PWP2Q15269 919 aaKnown RBP21.71■■□□□ 1.07
CCDC171-206ENST00000474193 RNF207Q6ZRF8 634 aa21.71■■□□□ 1.07
CCDC171-206ENST00000474193 PHF24Q9UPV7 400 aa21.71■■□□□ 1.07
CCDC171-206ENST00000474193 E7EWF7 191 aa21.7■■□□□ 1.06
CCDC171-206ENST00000474193 TNFAIP2Q03169 654 aa21.7■■□□□ 1.06
CCDC171-206ENST00000474193 ADGRF4Q8IZF3 695 aa21.7■■□□□ 1.06
CCDC171-206ENST00000474193 MAF1Q9H063 256 aa21.7■■□□□ 1.06
CCDC171-206ENST00000474193 LSG1Q9H089 658 aaKnown RBP21.7■■□□□ 1.06
CCDC171-206ENST00000474193 VAT1LQ9HCJ6 419 aa21.7■■□□□ 1.06
CCDC171-206ENST00000474193 RBM8AQ9Y5S9 174 aaKnown RBP21.7■■□□□ 1.06
CCDC171-206ENST00000474193 ALPK3Q96L96 1907 aa21.69■■□□□ 1.06
CCDC171-206ENST00000474193 MOXD2PA6NHM9 499 aa21.69■■□□□ 1.06
CCDC171-206ENST00000474193 C6orf222P0C671 652 aaPredicted RBP21.69■■□□□ 1.06
CCDC171-206ENST00000474193 CALML3P27482 149 aa21.69■■□□□ 1.06
CCDC171-206ENST00000474193 BMP8BP34820 402 aa21.69■■□□□ 1.06
CCDC171-206ENST00000474193 TRAF1Q13077 416 aa21.69■■□□□ 1.06
CCDC171-206ENST00000474193 WTAPQ15007 396 aa21.69■■□□□ 1.06
CCDC171-206ENST00000474193 CDC37Q16543 378 aaPredicted RBP21.69■■□□□ 1.06
CCDC171-206ENST00000474193 USH1GQ495M9 461 aa21.69■■□□□ 1.06
CCDC171-206ENST00000474193 RNF20Q5VTR2 975 aa21.69■■□□□ 1.06
CCDC171-206ENST00000474193 CYB5R4Q7L1T6 521 aa21.69■■□□□ 1.06
CCDC171-206ENST00000474193 MCF2L2Q86YR7 1114 aa21.69■■□□□ 1.06
CCDC171-206ENST00000474193 VTI1AQ96AJ9 217 aa21.69■■□□□ 1.06
CCDC171-206ENST00000474193 FGD4Q96M96 766 aa21.69■■□□□ 1.06
CCDC171-206ENST00000474193 AP5M1Q9H0R1 490 aa21.69■■□□□ 1.06
CCDC171-206ENST00000474193 NFIBO00712 420 aa21.68■■□□□ 1.06
CCDC171-206ENST00000474193 IQSEC1Q6DN90 963 aa21.68■■□□□ 1.06
CCDC171-206ENST00000474193 RGS22Q8NE09 1264 aa21.68■■□□□ 1.06
CCDC171-206ENST00000474193 GLT1D1Q96MS3 346 aa21.68■■□□□ 1.06
CCDC171-206ENST00000474193 VTA1Q9NP79 307 aa21.68■■□□□ 1.06
CCDC171-206ENST00000474193 MRPL11Q9Y3B7 192 aaKnown RBP21.68■■□□□ 1.06
CCDC171-206ENST00000474193 ABCB11O95342 1321 aa21.68■■□□□ 1.06
CCDC171-206ENST00000474193 SYNRGQ9UMZ2 1314 aa21.68■■□□□ 1.06
CCDC171-206ENST00000474193 KLRF2D3W0D1 207 aa21.67■■□□□ 1.06
CCDC171-206ENST00000474193 ADAMTS4O75173 837 aa21.67■■□□□ 1.06
CCDC171-206ENST00000474193 ACLYP53396 1101 aa21.67■■□□□ 1.06
CCDC171-206ENST00000474193 SEC23AQ15436 765 aa21.67■■□□□ 1.06
CCDC171-206ENST00000474193 TMEM67Q5HYA8 995 aa21.67■■□□□ 1.06
CCDC171-206ENST00000474193 GNASQ5JWF2 1037 aa21.67■■□□□ 1.06
CCDC171-206ENST00000474193 C1orf53Q5VUE5 145 aa21.67■■□□□ 1.06
CCDC171-206ENST00000474193 CATIPQ7Z7H3 387 aa21.67■■□□□ 1.06
CCDC171-206ENST00000474193 FBXO11Q86XK2 927 aa21.67■■□□□ 1.06
CCDC171-206ENST00000474193 DNERQ8NFT8 737 aa21.67■■□□□ 1.06
CCDC171-206ENST00000474193 GDF15Q99988 308 aa21.67■■□□□ 1.06
CCDC171-206ENST00000474193 UBE2OQ9C0C9 1292 aaKnown RBP21.67■■□□□ 1.06
CCDC171-206ENST00000474193 STARD7Q9NQZ5 370 aa21.67■■□□□ 1.06
CCDC171-206ENST00000474193 ZEB2O60315 1214 aa21.66■■□□□ 1.06
CCDC171-206ENST00000474193 MAGEA10P43363 369 aaPredicted RBP21.66■■□□□ 1.06
CCDC171-206ENST00000474193 GJA9P57773 515 aa21.66■■□□□ 1.06
CCDC171-206ENST00000474193 PDE4DQ08499 809 aa21.66■■□□□ 1.06
CCDC171-206ENST00000474193 KCNA10Q16322 511 aa21.66■■□□□ 1.06
CCDC171-206ENST00000474193 EEPD1Q7L9B9 569 aa21.66■■□□□ 1.06
CCDC171-206ENST00000474193 TMTC2Q8N394 836 aa21.66■■□□□ 1.06
CCDC171-206ENST00000474193 CLEC4DQ8WXI8 215 aa21.66■■□□□ 1.06
CCDC171-206ENST00000474193 LENG1Q96BZ8 264 aaPredicted RBP21.66■■□□□ 1.06
CCDC171-206ENST00000474193 CPVLQ9H3G5 476 aa21.66■■□□□ 1.06
CCDC171-206ENST00000474193 MCM3APO60318 1980 aa21.66■■□□□ 1.06
CCDC171-206ENST00000474193 A0A1W2PQ45 241 aaPredicted RBP21.65■■□□□ 1.06
CCDC171-206ENST00000474193 A0A1W2PQY0 241 aa21.65■■□□□ 1.06
CCDC171-206ENST00000474193 EPB41L2O43491 1005 aaKnown RBP21.65■■□□□ 1.06
CCDC171-206ENST00000474193 ALDH5A1P51649 535 aaPredicted RBP21.65■■□□□ 1.06
CCDC171-206ENST00000474193 RPS6P62753 249 aaKnown RBP21.65■■□□□ 1.06
CCDC171-206ENST00000474193 KLHDC9Q8NEP7 349 aa21.65■■□□□ 1.06
CCDC171-206ENST00000474193 MTA3Q9BTC8 594 aa21.65■■□□□ 1.06
CCDC171-206ENST00000474193 AMNQ9BXJ7 453 aa21.65■■□□□ 1.06
CCDC171-206ENST00000474193 PRO3102Q9H379 93 aa21.65■■□□□ 1.06
CCDC171-206ENST00000474193 PRDM5Q9NQX1 630 aaPredicted RBP21.65■■□□□ 1.06
CCDC171-206ENST00000474193 DCDC2CA8MYV0 355 aa21.64■■□□□ 1.05
CCDC171-206ENST00000474193 CST5P28325 142 aaPredicted RBP21.64■■□□□ 1.05
CCDC171-206ENST00000474193 MCM5P33992 734 aa21.64■■□□□ 1.05
CCDC171-206ENST00000474193 FXR1P51114 621 aaKnown RBP eCLIP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms