RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SEC63Q9UGP8 760 aaKnown RBP14.4□□□□□ -0.1
DDX56-209ENST00000473924 ABCB11O95342 1321 aa14.4□□□□□ -0.1
DDX56-209ENST00000473924 PNMA6FA0A0J9YX94 578 aa14.39□□□□□ -0.11
DDX56-209ENST00000473924 CYTH3O43739 400 aa14.39□□□□□ -0.11
DDX56-209ENST00000473924 PGK2P07205 417 aa14.39□□□□□ -0.11
DDX56-209ENST00000473924 RBM25P49756 843 aaKnown RBP14.39□□□□□ -0.11
DDX56-209ENST00000473924 MUM1L1Q5H9M0 696 aa14.39□□□□□ -0.11
DDX56-209ENST00000473924 NSMFQ6X4W1 530 aa14.39□□□□□ -0.11
DDX56-209ENST00000473924 TMTC3Q6ZXV5 915 aa14.39□□□□□ -0.11
DDX56-209ENST00000473924 SRBD1Q8N5C6 995 aaKnown RBP14.39□□□□□ -0.11
DDX56-209ENST00000473924 MTMR8Q96EF0 704 aa14.39□□□□□ -0.11
DDX56-209ENST00000473924 ABHD8Q96I13 439 aa14.39□□□□□ -0.11
DDX56-209ENST00000473924 LARP6Q9BRS8 491 aaKnown RBP14.39□□□□□ -0.11
DDX56-209ENST00000473924 BACH2Q9BYV9 841 aa14.39□□□□□ -0.11
DDX56-209ENST00000473924 MYH6P13533 1939 aa14.39□□□□□ -0.11
DDX56-209ENST00000473924 PFASO15067 1338 aa14.39□□□□□ -0.11
DDX56-209ENST00000473924 ZNF236Q9UL36 1845 aa14.38□□□□□ -0.11
DDX56-209ENST00000473924 PTPDC1A2A3K4 754 aa14.38□□□□□ -0.11
DDX56-209ENST00000473924 COBLO75128 1261 aa14.38□□□□□ -0.11
DDX56-209ENST00000473924 HMGCRP04035 888 aa14.38□□□□□ -0.11
DDX56-209ENST00000473924 HOXC6P09630 235 aa14.38□□□□□ -0.11
DDX56-209ENST00000473924 PDIA3P30101 505 aaKnown RBP14.38□□□□□ -0.11
DDX56-209ENST00000473924 AK2P54819 239 aa14.38□□□□□ -0.11
DDX56-209ENST00000473924 EVCP57679 992 aa14.38□□□□□ -0.11
DDX56-209ENST00000473924 UBXN2AP68543 259 aa14.38□□□□□ -0.11
DDX56-209ENST00000473924 CCL14Q16627 93 aa14.38□□□□□ -0.11
DDX56-209ENST00000473924 SLC35G1Q2M3R5 365 aa14.38□□□□□ -0.11
DDX56-209ENST00000473924 NPLOC4Q8TAT6 608 aa14.38□□□□□ -0.11
DDX56-209ENST00000473924 ALDH8A1Q9H2A2 487 aaPredicted RBP14.38□□□□□ -0.11
DDX56-209ENST00000473924 MRPL11Q9Y3B7 192 aaKnown RBP14.38□□□□□ -0.11
DDX56-209ENST00000473924 PCDHA1Q9Y5I3 950 aa14.38□□□□□ -0.11
DDX56-209ENST00000473924 POTEB2H3BUK9 544 aa14.37□□□□□ -0.11
DDX56-209ENST00000473924 NFIBO00712 420 aa14.37□□□□□ -0.11
DDX56-209ENST00000473924 CAPN15O75808 1086 aa14.37□□□□□ -0.11
DDX56-209ENST00000473924 MYCP01106 439 aaPredicted RBP14.37□□□□□ -0.11
DDX56-209ENST00000473924 CDC27P30260 824 aa14.37□□□□□ -0.11
DDX56-209ENST00000473924 ADD1P35611 737 aaKnown RBP14.37□□□□□ -0.11
DDX56-209ENST00000473924 CCT2P78371 535 aaKnown RBP14.37□□□□□ -0.11
DDX56-209ENST00000473924 STK3Q13188 491 aa14.37□□□□□ -0.11
DDX56-209ENST00000473924 MFSD14CQ5VZR4 134 aa14.37□□□□□ -0.11
DDX56-209ENST00000473924 NOL8Q76FK4 1167 aaKnown RBP14.37□□□□□ -0.11
DDX56-209ENST00000473924 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.37□□□□□ -0.11
DDX56-209ENST00000473924 TRIB2Q92519 343 aa14.37□□□□□ -0.11
DDX56-209ENST00000473924 ZNF274Q96GC6 653 aaPredicted RBP14.37□□□□□ -0.11
DDX56-209ENST00000473924 A1CFQ9NQ94 594 aaKnown RBP14.37□□□□□ -0.11
DDX56-209ENST00000473924 ZNFX1Q9P2E3 1918 aaKnown RBP14.37□□□□□ -0.11
DDX56-209ENST00000473924 BAZ2BQ9UIF8 2168 aaKnown RBP14.36□□□□□ -0.11
DDX56-209ENST00000473924 hCG_1642624A0A1W2PR95 340 aa14.36□□□□□ -0.11
DDX56-209ENST00000473924 PPP1R11O60927 126 aaPredicted RBP14.36□□□□□ -0.11
DDX56-209ENST00000473924 INHAP05111 366 aa14.36□□□□□ -0.11
DDX56-209ENST00000473924 ZNF792Q3KQV3 632 aa14.36□□□□□ -0.11
DDX56-209ENST00000473924 RNF207Q6ZRF8 634 aa14.36□□□□□ -0.11
DDX56-209ENST00000473924 MCF2L2Q86YR7 1114 aa14.36□□□□□ -0.11
DDX56-209ENST00000473924 CLEC4DQ8WXI8 215 aa14.36□□□□□ -0.11
DDX56-209ENST00000473924 ARMC5Q96C12 935 aa14.36□□□□□ -0.11
DDX56-209ENST00000473924 MAML3Q96JK9 1138 aa14.36□□□□□ -0.11
DDX56-209ENST00000473924 FAM217BQ9NTX9 383 aaPredicted RBP14.36□□□□□ -0.11
DDX56-209ENST00000473924 CYP39A1Q9NYL5 469 aa14.36□□□□□ -0.11
DDX56-209ENST00000473924 DIS3Q9Y2L1 958 aaKnown RBP14.36□□□□□ -0.11
DDX56-209ENST00000473924 NID2Q14112 1375 aa14.35□□□□□ -0.11
DDX56-209ENST00000473924 DNAJC25-GNG10A0A024R161 153 aa14.35□□□□□ -0.11
DDX56-209ENST00000473924 CCDC85CA6NKD9 419 aa14.35□□□□□ -0.11
DDX56-209ENST00000473924 CPLX1O14810 134 aa14.35□□□□□ -0.11
DDX56-209ENST00000473924 CALML3P27482 149 aa14.35□□□□□ -0.11
DDX56-209ENST00000473924 AKAP17AQ02040 695 aaKnown RBP14.35□□□□□ -0.11
DDX56-209ENST00000473924 BAATQ14032 418 aaPredicted RBP14.35□□□□□ -0.11
DDX56-209ENST00000473924 OLFML2BQ68BL8 750 aa14.35□□□□□ -0.11
DDX56-209ENST00000473924 CPLX2Q6PUV4 134 aaKnown RBP14.35□□□□□ -0.11
DDX56-209ENST00000473924 ZNF333Q96JL9 665 aa14.35□□□□□ -0.11
DDX56-209ENST00000473924 TBC1D32Q96NH3 1257 aa14.35□□□□□ -0.11
DDX56-209ENST00000473924 SLKQ9H2G2 1235 aaPredicted RBP14.35□□□□□ -0.11
DDX56-209ENST00000473924 NCOA5Q9HCD5 579 aaKnown RBP14.35□□□□□ -0.11
DDX56-209ENST00000473924 FLRT1Q9NZU1 646 aa14.35□□□□□ -0.11
DDX56-209ENST00000473924 TPCN1Q9ULQ1 816 aa14.35□□□□□ -0.11
DDX56-209ENST00000473924 V9GY48 417 aaPredicted RBP14.35□□□□□ -0.11
DDX56-209ENST00000473924 SMCHD1A6NHR9 2005 aa14.35□□□□□ -0.11
DDX56-209ENST00000473924 CNTNAP5Q8WYK1 1306 aa14.35□□□□□ -0.11
DDX56-209ENST00000473924 PLXNA1Q9UIW2 1896 aa14.34□□□□□ -0.11
DDX56-209ENST00000473924 CFBP00751 764 aa14.34□□□□□ -0.11
DDX56-209ENST00000473924 CYP2C19P33261 490 aa14.34□□□□□ -0.11
DDX56-209ENST00000473924 RPS6P62753 249 aaKnown RBP14.34□□□□□ -0.11
DDX56-209ENST00000473924 CNTN2Q02246 1040 aa14.34□□□□□ -0.11
DDX56-209ENST00000473924 RABEP1Q15276 862 aa14.34□□□□□ -0.11
DDX56-209ENST00000473924 SLC30A10Q6XR72 485 aa14.34□□□□□ -0.11
DDX56-209ENST00000473924 HEATR3Q7Z4Q2 680 aa14.34□□□□□ -0.11
DDX56-209ENST00000473924 RGS22Q8NE09 1264 aa14.34□□□□□ -0.11
DDX56-209ENST00000473924 KIF2CQ99661 725 aa14.34□□□□□ -0.11
DDX56-209ENST00000473924 TMEM106CQ9BVX2 250 aa14.34□□□□□ -0.11
DDX56-209ENST00000473924 PRKAR2AP13861 404 aaKnown RBP14.33□□□□□ -0.12
DDX56-209ENST00000473924 FUT2Q10981 343 aa14.33□□□□□ -0.12
DDX56-209ENST00000473924 TRIM32Q13049 653 aa14.33□□□□□ -0.12
DDX56-209ENST00000473924 FAM133AQ8N9E0 248 aa14.33□□□□□ -0.12
DDX56-209ENST00000473924 PHKBQ93100 1093 aa14.33□□□□□ -0.12
DDX56-209ENST00000473924 TINF2Q9BSI4 451 aa14.33□□□□□ -0.12
DDX56-209ENST00000473924 MAF1Q9H063 256 aa14.33□□□□□ -0.12
DDX56-209ENST00000473924 RNF208Q9H0X6 261 aa14.33□□□□□ -0.12
DDX56-209ENST00000473924 HMX1Q9NP08 348 aaPredicted RBP14.33□□□□□ -0.12
DDX56-209ENST00000473924 RBM27Q9P2N5 1060 aaKnown RBP14.33□□□□□ -0.12
DDX56-209ENST00000473924 ADD3Q9UEY8 706 aaKnown RBP14.33□□□□□ -0.12
DDX56-209ENST00000473924 ST18O60284 1047 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms