RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 TRPM4Q8TD43 1214 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 STAMQ92783 540 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 CUL5Q93034 780 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 PSTPIP2Q9H939 334 aa20.45■□□□□ 0.86
VARS2-206ENST00000473916 TDP2O95551 362 aa20.44■□□□□ 0.86
VARS2-206ENST00000473916 CAVIN2O95810 425 aa20.44■□□□□ 0.86
VARS2-206ENST00000473916 AFMP43652 599 aa20.44■□□□□ 0.86
VARS2-206ENST00000473916 PRAMEF18Q5VWM3 479 aa20.44■□□□□ 0.86
VARS2-206ENST00000473916 RRAGDQ9NQL2 400 aaPredicted RBP20.44■□□□□ 0.86
VARS2-206ENST00000473916 POLR2AP24928 1970 aaKnown RBP20.44■□□□□ 0.86
VARS2-206ENST00000473916 SLC37A4O43826 429 aa20.44■□□□□ 0.86
VARS2-206ENST00000473916 NEMFO60524 1076 aa20.44■□□□□ 0.86
VARS2-206ENST00000473916 E2F4Q16254 413 aa20.44■□□□□ 0.86
VARS2-206ENST00000473916 DTHD1Q6ZMT9 781 aa20.44■□□□□ 0.86
VARS2-206ENST00000473916 DEFB129Q9H1M3 183 aa20.44■□□□□ 0.86
VARS2-206ENST00000473916 PRR12Q9ULL5 1215 aa20.44■□□□□ 0.86
VARS2-206ENST00000473916 FZD1Q9UP38 647 aa20.44■□□□□ 0.86
VARS2-206ENST00000473916 SLFN14P0C7P3 912 aa20.43■□□□□ 0.86
VARS2-206ENST00000473916 LONP1P36776 959 aaKnown RBP20.43■□□□□ 0.86
VARS2-206ENST00000473916 TNFAIP1Q13829 316 aa20.43■□□□□ 0.86
VARS2-206ENST00000473916 KARSQ15046 597 aaKnown RBP20.43■□□□□ 0.86
VARS2-206ENST00000473916 NBPF12Q5TAG4 269 aaPredicted RBP20.43■□□□□ 0.86
VARS2-206ENST00000473916 BTNL9Q6UXG8 535 aa20.43■□□□□ 0.86
VARS2-206ENST00000473916 PAGE5Q96GU1 130 aa20.43■□□□□ 0.86
VARS2-206ENST00000473916 P2RX7Q99572 595 aaKnown RBP20.43■□□□□ 0.86
VARS2-206ENST00000473916 MAN1B1Q9UKM7 699 aa20.43■□□□□ 0.86
VARS2-206ENST00000473916 OR52Z1P0C646 297 aa20.43■□□□□ 0.86
VARS2-206ENST00000473916 DGKZQ13574 1117 aa20.43■□□□□ 0.86
VARS2-206ENST00000473916 ELOA2Q8IYF1 753 aaPredicted RBP20.43■□□□□ 0.86
VARS2-206ENST00000473916 GOPCQ9HD26 462 aa20.43■□□□□ 0.86
VARS2-206ENST00000473916 BECN2A8MW95 431 aa20.42■□□□□ 0.86
VARS2-206ENST00000473916 SAMD1Q6SPF0 538 aaPredicted RBP20.42■□□□□ 0.86
VARS2-206ENST00000473916 SH3RF1Q7Z6J0 888 aa20.42■□□□□ 0.86
VARS2-206ENST00000473916 MTRQ99707 1265 aa20.42■□□□□ 0.86
VARS2-206ENST00000473916 VCPKMTQ9H867 229 aa20.42■□□□□ 0.86
VARS2-206ENST00000473916 GOLGA6L19H0YKK7 550 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 SARSP49591 514 aaKnown RBP20.41■□□□□ 0.86
VARS2-206ENST00000473916 STAT2P52630 851 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 MRPL12P52815 198 aaKnown RBP20.41■□□□□ 0.86
VARS2-206ENST00000473916 ANGEL2Q5VTE6 544 aaKnown RBP20.41■□□□□ 0.86
VARS2-206ENST00000473916 PDXDC2PQ6P474 469 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 LRRC15Q8TF66 581 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 PLIN2Q99541 437 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 ZNF341Q9BYN7 854 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 SYNPO2Q9UMS6 1093 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 ASNSP08243 561 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 LMNB1P20700 586 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 EPS15P42566 896 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 MMP14P50281 582 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 FBXO11Q86XK2 927 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 SPC24Q8NBT2 197 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 AMNQ9BXJ7 453 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 NAT10Q9H0A0 1025 aaKnown RBP20.41■□□□□ 0.86
VARS2-206ENST00000473916 FBXO28Q9NVF7 368 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 GPRC5DQ9NZD1 345 aa20.41■□□□□ 0.86
VARS2-206ENST00000473916 MEIS2O14770 477 aa20.4■□□□□ 0.86
VARS2-206ENST00000473916 OPLAHO14841 1288 aa20.4■□□□□ 0.86
VARS2-206ENST00000473916 INPP5BP32019 993 aa20.4■□□□□ 0.86
VARS2-206ENST00000473916 PRPHP41219 470 aa20.4■□□□□ 0.86
VARS2-206ENST00000473916 NT5DC1Q5TFE4 455 aa20.4■□□□□ 0.86
VARS2-206ENST00000473916 SMARCE1Q969G3 411 aa20.4■□□□□ 0.86
VARS2-206ENST00000473916 GJA10Q969M2 543 aa20.4■□□□□ 0.86
VARS2-206ENST00000473916 H7C1D1 291 aa20.39■□□□□ 0.86
VARS2-206ENST00000473916 LAD1O00515 517 aa20.39■□□□□ 0.86
VARS2-206ENST00000473916 PTMAP06454 111 aaKnown RBP20.39■□□□□ 0.86
VARS2-206ENST00000473916 TECP42680 631 aa20.39■□□□□ 0.86
VARS2-206ENST00000473916 HIRAP54198 1017 aaPredicted RBP20.39■□□□□ 0.86
VARS2-206ENST00000473916 NCAPHQ15003 741 aa20.39■□□□□ 0.86
VARS2-206ENST00000473916 SPATA20Q8TB22 786 aa20.39■□□□□ 0.86
VARS2-206ENST00000473916 KIFC2Q96AC6 838 aa20.39■□□□□ 0.86
VARS2-206ENST00000473916 UIMC1Q96RL1 719 aa20.39■□□□□ 0.86
VARS2-206ENST00000473916 TRIM5Q9C035 493 aa20.39■□□□□ 0.86
VARS2-206ENST00000473916 BLZF1Q9H2G9 400 aa20.39■□□□□ 0.86
VARS2-206ENST00000473916 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.39■□□□□ 0.86
VARS2-206ENST00000473916 HOOK1Q9UJC3 728 aaKnown RBP20.39■□□□□ 0.86
VARS2-206ENST00000473916 DOCK1Q14185 1865 aa20.39■□□□□ 0.85
VARS2-206ENST00000473916 ESPNB1AK53 854 aa20.39■□□□□ 0.85
VARS2-206ENST00000473916 ZNF75DP51815 510 aa20.39■□□□□ 0.85
VARS2-206ENST00000473916 KANK3Q6NY19 840 aa20.39■□□□□ 0.85
VARS2-206ENST00000473916 CCDC174Q6PII3 467 aa20.39■□□□□ 0.85
VARS2-206ENST00000473916 IQUBQ8NA54 791 aa20.39■□□□□ 0.85
VARS2-206ENST00000473916 MTMR9Q96QG7 549 aa20.39■□□□□ 0.85
VARS2-206ENST00000473916 BPIFA3Q9BQP9 254 aa20.39■□□□□ 0.85
VARS2-206ENST00000473916 TXKP42681 527 aa20.38■□□□□ 0.85
VARS2-206ENST00000473916 MORC3Q14149 939 aa20.38■□□□□ 0.85
VARS2-206ENST00000473916 NAALADL2Q58DX5 795 aa20.38■□□□□ 0.85
VARS2-206ENST00000473916 PLA2G4DQ86XP0 818 aa20.38■□□□□ 0.85
VARS2-206ENST00000473916 FEZ1Q99689 392 aa20.38■□□□□ 0.85
VARS2-206ENST00000473916 DISC1Q9NRI5 854 aa20.38■□□□□ 0.85
VARS2-206ENST00000473916 YBX3P16989 372 aaKnown RBP eCLIP20.37■□□□□ 0.85
VARS2-206ENST00000473916 DPYDQ12882 1025 aa20.37■□□□□ 0.85
VARS2-206ENST00000473916 CALCRLQ16602 461 aa20.37■□□□□ 0.85
VARS2-206ENST00000473916 ZNF830Q96NB3 372 aaPredicted RBP20.37■□□□□ 0.85
VARS2-206ENST00000473916 ANO3Q9BYT9 981 aa20.37■□□□□ 0.85
VARS2-206ENST00000473916 HSD3B7Q9H2F3 369 aa20.37■□□□□ 0.85
VARS2-206ENST00000473916 GGA3Q9NZ52 723 aa20.37■□□□□ 0.85
VARS2-206ENST00000473916 CCDC39Q9UFE4 941 aa20.37■□□□□ 0.85
VARS2-206ENST00000473916 HOXA13P31271 388 aaPredicted RBP20.37■□□□□ 0.85
VARS2-206ENST00000473916 GPC2Q8N158 579 aa20.37■□□□□ 0.85
VARS2-206ENST00000473916 DDNO94850 711 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms