RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 DYNC1LI2O43237 492 aaPredicted RBP15.07■□□□□ 0
TRAF4-209ENST00000473421 HMMRO75330 724 aa15.07■□□□□ 0
TRAF4-209ENST00000473421 ARHGEF15O94989 841 aa15.07■□□□□ 0
TRAF4-209ENST00000473421 SLFN13Q68D06 897 aa15.07■□□□□ 0
TRAF4-209ENST00000473421 KRT40Q6A162 431 aa15.07■□□□□ 0
TRAF4-209ENST00000473421 TAPT1Q6NXT6 567 aa15.07■□□□□ 0
TRAF4-209ENST00000473421 PSRC1Q6PGN9 363 aaPredicted RBP15.07■□□□□ 0
TRAF4-209ENST00000473421 TLK2Q86UE8 772 aa15.07■□□□□ 0
TRAF4-209ENST00000473421 MIER1Q8N108 512 aa15.07■□□□□ 0
TRAF4-209ENST00000473421 BDP1A6H8Y1 2624 aa15.07■□□□□ 0
TRAF4-209ENST00000473421 SCN5AQ14524 2016 aa15.06■□□□□ 0
TRAF4-209ENST00000473421 EPOPA6NHQ4 379 aa15.06■□□□□ 0
TRAF4-209ENST00000473421 GPAA1O43292 621 aa15.06■□□□□ 0
TRAF4-209ENST00000473421 NMT2O60551 498 aa15.06■□□□□ 0
TRAF4-209ENST00000473421 BMP3P12645 472 aa15.06■□□□□ 0
TRAF4-209ENST00000473421 BMP1P13497 986 aa15.06■□□□□ 0
TRAF4-209ENST00000473421 KCNQ1P51787 676 aa15.06■□□□□ 0
TRAF4-209ENST00000473421 MRPS5P82675 430 aaKnown RBP15.06■□□□□ 0
TRAF4-209ENST00000473421 FSCN1Q16658 493 aaKnown RBP15.06■□□□□ 0
TRAF4-209ENST00000473421 FBXO16Q8IX29 292 aaPredicted RBP15.06■□□□□ 0
TRAF4-209ENST00000473421 KBTBD3Q8NAB2 608 aa15.06■□□□□ 0
TRAF4-209ENST00000473421 GMCL1P1Q8NEA9 526 aa15.06■□□□□ 0
TRAF4-209ENST00000473421 APPBP2Q92624 585 aa15.06■□□□□ 0
TRAF4-209ENST00000473421 UHRF1Q96T88 793 aaPredicted RBP15.06■□□□□ 0
TRAF4-209ENST00000473421 SPC25Q9HBM1 224 aa15.06■□□□□ 0
TRAF4-209ENST00000473421 RNF146Q9NTX7 359 aa15.06■□□□□ 0
TRAF4-209ENST00000473421 MSRAQ9UJ68 235 aa15.06■□□□□ 0
TRAF4-209ENST00000473421 PRRC2BQ5JSZ5 2229 aaKnown RBP15.05■□□□□ 0
TRAF4-209ENST00000473421 TRANK1O15050 2925 aa15.05■□□□□ 0
TRAF4-209ENST00000473421 TLR3O15455 904 aaKnown RBP15.05■□□□□ -0
TRAF4-209ENST00000473421 RNF113AO15541 343 aaKnown RBP15.05■□□□□ -0
TRAF4-209ENST00000473421 TTLL1O95922 423 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 CYP2C9P11712 490 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 MCCP23508 829 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 TTLL4Q14679 1199 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 ZSCAN25Q6NSZ9 544 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 GIMAP6Q6P9H5 292 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 CCDC174Q6PII3 467 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 SPRED2Q7Z698 418 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 ZNF444Q8N0Y2 327 aaPredicted RBP15.05■□□□□ -0
TRAF4-209ENST00000473421 MICALL1Q8N3F8 863 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 NEDD1Q8NHV4 660 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 LRRCC1Q9C099 1032 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 ACAD9Q9H845 621 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 CERS4Q9HA82 394 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 SLC28A3Q9HAS3 691 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 ECHDC1Q9NTX5 307 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 TRMT13Q9NUP7 481 aaKnown RBP15.05■□□□□ -0
TRAF4-209ENST00000473421 FBXO40Q9UH90 709 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 DDX19BQ9UMR2 479 aa15.05■□□□□ -0
TRAF4-209ENST00000473421 CTDP1Q9Y5B0 961 aaPredicted RBP15.05■□□□□ -0
TRAF4-209ENST00000473421 FOXP2O15409 715 aa15.04■□□□□ -0
TRAF4-209ENST00000473421 ALAS1P13196 640 aa15.04■□□□□ -0
TRAF4-209ENST00000473421 TDO2P48775 406 aa15.04■□□□□ -0
TRAF4-209ENST00000473421 OAZ1P54368 228 aa15.04■□□□□ -0
TRAF4-209ENST00000473421 TFAP4Q01664 338 aa15.04■□□□□ -0
TRAF4-209ENST00000473421 RAB30Q15771 203 aa15.04■□□□□ -0
TRAF4-209ENST00000473421 KCTD1Q719H9 257 aa15.04■□□□□ -0
TRAF4-209ENST00000473421 IFNL3Q8IZI9 196 aa15.04■□□□□ -0
TRAF4-209ENST00000473421 TRERF1Q96PN7 1200 aa15.04■□□□□ -0
TRAF4-209ENST00000473421 IL17RBQ9NRM6 502 aa15.04■□□□□ -0
TRAF4-209ENST00000473421 APPP05067 770 aa15.03■□□□□ -0
TRAF4-209ENST00000473421 STAG1Q8WVM7 1258 aa15.03■□□□□ -0
TRAF4-209ENST00000473421 CYP39A1Q9NYL5 469 aa15.03■□□□□ -0
TRAF4-209ENST00000473421 ISY1Q9ULR0 285 aaKnown RBP15.03■□□□□ -0
TRAF4-209ENST00000473421 PLIN4Q96Q06 1357 aa15.02■□□□□ -0
TRAF4-209ENST00000473421 PATL2C9JE40 543 aaKnown RBP15.02■□□□□ -0
TRAF4-209ENST00000473421 PPP2R2DQ66LE6 453 aa15.02■□□□□ -0
TRAF4-209ENST00000473421 TTBK2Q6IQ55 1244 aa15.02■□□□□ -0
TRAF4-209ENST00000473421 DEFB128Q7Z7B8 93 aa15.02■□□□□ -0
TRAF4-209ENST00000473421 OTUD7AQ8TE49 926 aaPredicted RBP15.02■□□□□ -0
TRAF4-209ENST00000473421 AP5M1Q9H0R1 490 aa15.02■□□□□ -0
TRAF4-209ENST00000473421 ALDH8A1Q9H2A2 487 aaPredicted RBP15.02■□□□□ -0
TRAF4-209ENST00000473421 PRR12Q9ULL5 1215 aa15.02■□□□□ -0
TRAF4-209ENST00000473421 MTMR7Q9Y216 660 aa15.02■□□□□ -0
TRAF4-209ENST00000473421 SLC4A7Q9Y6M7 1214 aa15.02■□□□□ -0
TRAF4-209ENST00000473421 TET1Q8NFU7 2136 aa15.01□□□□□ -0.01
TRAF4-209ENST00000473421 ASB14A6NK59 587 aa15.01□□□□□ -0.01
TRAF4-209ENST00000473421 ZBBXA8MT70 800 aa15.01□□□□□ -0.01
TRAF4-209ENST00000473421 TSPY3P0CV98 308 aa15.01□□□□□ -0.01
TRAF4-209ENST00000473421 TSPY8P0CW00 308 aa15.01□□□□□ -0.01
TRAF4-209ENST00000473421 STAT2P52630 851 aa15.01□□□□□ -0.01
TRAF4-209ENST00000473421 CTDSPL2Q05D32 466 aa15.01□□□□□ -0.01
TRAF4-209ENST00000473421 KHSRPQ92945 711 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRAF4-209ENST00000473421 GMCL1Q96IK5 515 aa15.01□□□□□ -0.01
TRAF4-209ENST00000473421 MTCH2Q9Y6C9 303 aa15.01□□□□□ -0.01
TRAF4-209ENST00000473421 CABYRO75952 493 aa15□□□□□ -0.01
TRAF4-209ENST00000473421 CA3P07451 260 aa15□□□□□ -0.01
TRAF4-209ENST00000473421 ATP2A2P16615 1042 aaKnown RBP15□□□□□ -0.01
TRAF4-209ENST00000473421 SLC16A2P36021 539 aa15□□□□□ -0.01
TRAF4-209ENST00000473421 SLC1A4P43007 532 aa15□□□□□ -0.01
TRAF4-209ENST00000473421 PPARAQ07869 468 aa15□□□□□ -0.01
TRAF4-209ENST00000473421 IKQ13123 557 aaPredicted RBP15□□□□□ -0.01
TRAF4-209ENST00000473421 IQSEC1Q6DN90 963 aa15□□□□□ -0.01
TRAF4-209ENST00000473421 NSMFQ6X4W1 530 aa15□□□□□ -0.01
TRAF4-209ENST00000473421 KIAA1211Q6ZU35 1233 aa15□□□□□ -0.01
TRAF4-209ENST00000473421 MORC4Q8TE76 937 aa15□□□□□ -0.01
TRAF4-209ENST00000473421 EPHX3Q9H6B9 360 aa15□□□□□ -0.01
TRAF4-209ENST00000473421 SYNPO2Q9UMS6 1093 aa15□□□□□ -0.01
TRAF4-209ENST00000473421 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms