RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 DNAJC25-GNG10A0A024R161 153 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 STRNO43815 780 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 PLEKHA8P1O95397 391 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 HMGCRP04035 888 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 ALAS1P13196 640 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 CASTP20810 708 aaKnown RBP15.29■□□□□ 0.04
TPM3-216ENST00000473036 ZNF792Q3KQV3 632 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 MAP3K21Q5TCX8 1036 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 Q6ZUG5 572 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 CATIPQ7Z7H3 387 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 CCDC144CPQ8IYA2 1237 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 ABRAQ8N0Z2 381 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 CMTR1Q8N1G2 835 aaKnown RBP15.29■□□□□ 0.04
TPM3-216ENST00000473036 NUP133Q8WUM0 1156 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 CLEC4DQ8WXI8 215 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 PAWRQ96IZ0 340 aaKnown RBP15.29■□□□□ 0.04
TPM3-216ENST00000473036 TRERF1Q96PN7 1200 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 PURBQ96QR8 312 aaKnown RBP15.29■□□□□ 0.04
TPM3-216ENST00000473036 MMP19Q99542 508 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 APBA2Q99767 749 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.29■□□□□ 0.04
TPM3-216ENST00000473036 RIOX1Q9H6W3 641 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 RNF146Q9NTX7 359 aa15.29■□□□□ 0.04
TPM3-216ENST00000473036 FAM217BQ9NTX9 383 aaPredicted RBP15.29■□□□□ 0.04
TPM3-216ENST00000473036 ASTN1O14525 1302 aa15.28■□□□□ 0.04
TPM3-216ENST00000473036 RPTORQ8N122 1335 aa15.28■□□□□ 0.04
TPM3-216ENST00000473036 NFIBO00712 420 aa15.28■□□□□ 0.04
TPM3-216ENST00000473036 DDAH1O94760 285 aa15.28■□□□□ 0.04
TPM3-216ENST00000473036 FCER1AP12319 257 aa15.28■□□□□ 0.04
TPM3-216ENST00000473036 CDC37Q16543 378 aaPredicted RBP15.28■□□□□ 0.04
TPM3-216ENST00000473036 QRICH1Q2TAL8 776 aa15.28■□□□□ 0.04
TPM3-216ENST00000473036 SRBD1Q8N5C6 995 aaKnown RBP15.28■□□□□ 0.04
TPM3-216ENST00000473036 TRPV1Q8NER1 839 aa15.28■□□□□ 0.04
TPM3-216ENST00000473036 IL17RAQ96F46 866 aa15.28■□□□□ 0.04
TPM3-216ENST00000473036 MAP3K14Q99558 947 aa15.28■□□□□ 0.04
TPM3-216ENST00000473036 AGXT2Q9BYV1 514 aa15.28■□□□□ 0.04
TPM3-216ENST00000473036 CWC22Q9HCG8 908 aaKnown RBP15.28■□□□□ 0.04
TPM3-216ENST00000473036 A1CFQ9NQ94 594 aaKnown RBP15.28■□□□□ 0.04
TPM3-216ENST00000473036 CCPG1Q9ULG6 757 aa15.28■□□□□ 0.04
TPM3-216ENST00000473036 DDX49Q9Y6V7 483 aaKnown RBP15.28■□□□□ 0.04
TPM3-216ENST00000473036 IVNS1ABPQ9Y6Y0 642 aa15.28■□□□□ 0.04
TPM3-216ENST00000473036 CCDC69A6NI79 296 aa15.27■□□□□ 0.04
TPM3-216ENST00000473036 CACNB2Q08289 660 aaPredicted RBP15.27■□□□□ 0.04
TPM3-216ENST00000473036 APOBRQ0VD83 1088 aa15.27■□□□□ 0.04
TPM3-216ENST00000473036 TOB2Q14106 344 aaPredicted RBP15.27■□□□□ 0.04
TPM3-216ENST00000473036 APOA5Q6Q788 366 aa15.27■□□□□ 0.04
TPM3-216ENST00000473036 BLOC1S2Q6QNY1 142 aa15.27■□□□□ 0.04
TPM3-216ENST00000473036 NFXL1Q6ZNB6 911 aa15.27■□□□□ 0.04
TPM3-216ENST00000473036 RUFY3Q7L099 469 aa15.27■□□□□ 0.04
TPM3-216ENST00000473036 DPP9Q86TI2 863 aa15.27■□□□□ 0.04
TPM3-216ENST00000473036 TMTC2Q8N394 836 aa15.27■□□□□ 0.04
TPM3-216ENST00000473036 FBXL16Q8N461 479 aa15.27■□□□□ 0.04
TPM3-216ENST00000473036 CHST13Q8NET6 341 aa15.27■□□□□ 0.04
TPM3-216ENST00000473036 TBC1D5Q92609 795 aa15.27■□□□□ 0.04
TPM3-216ENST00000473036 MAML3Q96JK9 1138 aa15.27■□□□□ 0.04
TPM3-216ENST00000473036 PIGSQ96S52 555 aa15.27■□□□□ 0.04
TPM3-216ENST00000473036 UPF3BQ9BZI7 483 aaKnown RBP15.27■□□□□ 0.04
TPM3-216ENST00000473036 HMX1Q9NP08 348 aaPredicted RBP15.27■□□□□ 0.04
TPM3-216ENST00000473036 STXBP5LQ9Y2K9 1186 aa15.27■□□□□ 0.04
TPM3-216ENST00000473036 CTDP1Q9Y5B0 961 aaPredicted RBP15.27■□□□□ 0.04
TPM3-216ENST00000473036 SOX1O00570 391 aaPredicted RBP15.26■□□□□ 0.03
TPM3-216ENST00000473036 OPLAHO14841 1288 aa15.26■□□□□ 0.03
TPM3-216ENST00000473036 HMGB1P09429 215 aaKnown RBP15.26■□□□□ 0.03
TPM3-216ENST00000473036 CDC27P30260 824 aa15.26■□□□□ 0.03
TPM3-216ENST00000473036 CYP2C19P33261 490 aa15.26■□□□□ 0.03
TPM3-216ENST00000473036 COPB2P35606 906 aa15.26■□□□□ 0.03
TPM3-216ENST00000473036 CNTN2Q02246 1040 aa15.26■□□□□ 0.03
TPM3-216ENST00000473036 FUT2Q10981 343 aa15.26■□□□□ 0.03
TPM3-216ENST00000473036 USH1GQ495M9 461 aa15.26■□□□□ 0.03
TPM3-216ENST00000473036 MICU3Q86XE3 530 aa15.26■□□□□ 0.03
TPM3-216ENST00000473036 TRMT44Q8IYL2 757 aaKnown RBP15.26■□□□□ 0.03
TPM3-216ENST00000473036 FAM133AQ8N9E0 248 aa15.26■□□□□ 0.03
TPM3-216ENST00000473036 LARP6Q9BRS8 491 aaKnown RBP15.26■□□□□ 0.03
TPM3-216ENST00000473036 TM6SF1Q9BZW5 370 aa15.26■□□□□ 0.03
TPM3-216ENST00000473036 ACAD9Q9H845 621 aa15.26■□□□□ 0.03
TPM3-216ENST00000473036 SLC12A7Q9Y666 1083 aa15.26■□□□□ 0.03
TPM3-216ENST00000473036 KLF18A0A0U1RQI7 1052 aa15.25■□□□□ 0.03
TPM3-216ENST00000473036 SOWAHBA6NEL2 793 aa15.25■□□□□ 0.03
TPM3-216ENST00000473036 PRKAR2AP13861 404 aaKnown RBP15.25■□□□□ 0.03
TPM3-216ENST00000473036 CCND3P30281 292 aaPredicted RBP15.25■□□□□ 0.03
TPM3-216ENST00000473036 KCTD2Q14681 263 aa15.25■□□□□ 0.03
TPM3-216ENST00000473036 TKFCQ3LXA3 575 aa15.25■□□□□ 0.03
TPM3-216ENST00000473036 PRAMEF19Q5SWL8 479 aa15.25■□□□□ 0.03
TPM3-216ENST00000473036 OLFML2BQ68BL8 750 aa15.25■□□□□ 0.03
TPM3-216ENST00000473036 FANCBQ8NB91 859 aa15.25■□□□□ 0.03
TPM3-216ENST00000473036 BRF1Q92994 677 aa15.25■□□□□ 0.03
TPM3-216ENST00000473036 LRCH3Q96II8 777 aa15.25■□□□□ 0.03
TPM3-216ENST00000473036 CYP39A1Q9NYL5 469 aa15.25■□□□□ 0.03
TPM3-216ENST00000473036 SLC30A10Q6XR72 485 aa15.24■□□□□ 0.03
TPM3-216ENST00000473036 TMTC3Q6ZXV5 915 aa15.24■□□□□ 0.03
TPM3-216ENST00000473036 TDHQ8IZJ6 230 aa15.24■□□□□ 0.03
TPM3-216ENST00000473036 ANKRD35Q8N283 1001 aa15.24■□□□□ 0.03
TPM3-216ENST00000473036 DEFB123Q8N688 67 aa15.24■□□□□ 0.03
TPM3-216ENST00000473036 PIBF1Q8WXW3 757 aa15.24■□□□□ 0.03
TPM3-216ENST00000473036 KIF2CQ99661 725 aa15.24■□□□□ 0.03
TPM3-216ENST00000473036 SPZ1Q9BXG8 430 aa15.24■□□□□ 0.03
TPM3-216ENST00000473036 FBXO40Q9UH90 709 aa15.24■□□□□ 0.03
TPM3-216ENST00000473036 OGDHLQ9ULD0 1010 aa15.24■□□□□ 0.03
TPM3-216ENST00000473036 FRMPD3Q5JV73 1810 aa15.24■□□□□ 0.03
TPM3-216ENST00000473036 hCG_1642624A0A1W2PR95 340 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms