RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 ALYREFQ86V81 257 aaKnown RBP16.66■□□□□ 0.26
SMURF1-203ENST00000472627 FAM133AQ8N9E0 248 aa16.66■□□□□ 0.26
SMURF1-203ENST00000472627 RETREG2Q8NC44 543 aa16.66■□□□□ 0.26
SMURF1-203ENST00000472627 FGD4Q96M96 766 aa16.66■□□□□ 0.26
SMURF1-203ENST00000472627 GPHNQ9NQX3 736 aaPredicted RBP16.66■□□□□ 0.26
SMURF1-203ENST00000472627 POLR3EQ9NVU0 708 aa16.66■□□□□ 0.26
SMURF1-203ENST00000472627 PRRC2BQ5JSZ5 2229 aaKnown RBP16.66■□□□□ 0.26
SMURF1-203ENST00000472627 BAZ2AQ9UIF9 1905 aaKnown RBP16.65■□□□□ 0.26
SMURF1-203ENST00000472627 FAM86C2PA6NEL3 165 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 PRR33A8MZF0 331 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 PI4K2BG5E9Z4 385 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 SMIM22K7EJ46 135 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 UBE3CQ15386 1083 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 CSPP1Q1MSJ5 1256 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 TKFCQ3LXA3 575 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 CEP85Q6P2H3 762 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 CTR9Q6PD62 1173 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 RPAP2Q8IXW5 612 aaPredicted RBP16.65■□□□□ 0.26
SMURF1-203ENST00000472627 RHPN1Q8TCX5 695 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 KIF1BPQ96EK5 621 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 AGBL1Q96MI9 1066 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 FTOQ9C0B1 505 aaKnown RBP eCLIP16.65■□□□□ 0.26
SMURF1-203ENST00000472627 LMCD1Q9NZU5 365 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 CLIP2Q9UDT6 1046 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 ASTN1O14525 1302 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 TNKSO95271 1327 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 ZBED9Q6R2W3 1325 aa16.65■□□□□ 0.26
SMURF1-203ENST00000472627 MCM3APO60318 1980 aa16.64■□□□□ 0.25
SMURF1-203ENST00000472627 BAIAP3O94812 1187 aa16.64■□□□□ 0.25
SMURF1-203ENST00000472627 SMPD1P17405 629 aa16.64■□□□□ 0.25
SMURF1-203ENST00000472627 KCNJ6P48051 423 aa16.64■□□□□ 0.25
SMURF1-203ENST00000472627 CPT1AP50416 773 aa16.64■□□□□ 0.25
SMURF1-203ENST00000472627 PSMC6P62333 389 aa16.64■□□□□ 0.25
SMURF1-203ENST00000472627 CNTN2Q02246 1040 aa16.64■□□□□ 0.25
SMURF1-203ENST00000472627 TAP1Q03518 808 aa16.64■□□□□ 0.25
SMURF1-203ENST00000472627 IKQ13123 557 aaPredicted RBP16.64■□□□□ 0.25
SMURF1-203ENST00000472627 HERC6Q8IVU3 1022 aa16.64■□□□□ 0.25
SMURF1-203ENST00000472627 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.64■□□□□ 0.25
SMURF1-203ENST00000472627 VTA1Q9NP79 307 aa16.64■□□□□ 0.25
SMURF1-203ENST00000472627 RNF146Q9NTX7 359 aa16.64■□□□□ 0.25
SMURF1-203ENST00000472627 GRIN2DO15399 1336 aa16.64■□□□□ 0.25
SMURF1-203ENST00000472627 MUC6Q6W4X9 2439 aa16.63■□□□□ 0.25
SMURF1-203ENST00000472627 ALADP13716 330 aa16.63■□□□□ 0.25
SMURF1-203ENST00000472627 STAT2P52630 851 aa16.63■□□□□ 0.25
SMURF1-203ENST00000472627 GRB10Q13322 594 aa16.63■□□□□ 0.25
SMURF1-203ENST00000472627 ZNF444Q8N0Y2 327 aaPredicted RBP16.63■□□□□ 0.25
SMURF1-203ENST00000472627 GMCL1P1Q8NEA9 526 aa16.63■□□□□ 0.25
SMURF1-203ENST00000472627 CHURC1Q8WUH1 139 aa16.63■□□□□ 0.25
SMURF1-203ENST00000472627 A1CFQ9NQ94 594 aaKnown RBP16.63■□□□□ 0.25
SMURF1-203ENST00000472627 NOD1Q9Y239 953 aa16.63■□□□□ 0.25
SMURF1-203ENST00000472627 RAD50Q92878 1312 aa16.63■□□□□ 0.25
SMURF1-203ENST00000472627 TRANK1O15050 2925 aa16.62■□□□□ 0.25
SMURF1-203ENST00000472627 PITPNM1O00562 1244 aa16.62■□□□□ 0.25
SMURF1-203ENST00000472627 TTLL1O95922 423 aa16.62■□□□□ 0.25
SMURF1-203ENST00000472627 CYP2C9P11712 490 aa16.62■□□□□ 0.25
SMURF1-203ENST00000472627 BMP3P12645 472 aa16.62■□□□□ 0.25
SMURF1-203ENST00000472627 RASA1P20936 1047 aa16.62■□□□□ 0.25
SMURF1-203ENST00000472627 BFSP2Q13515 415 aa16.62■□□□□ 0.25
SMURF1-203ENST00000472627 FAM47CQ5HY64 1035 aa16.62■□□□□ 0.25
SMURF1-203ENST00000472627 KIAA1211Q6ZU35 1233 aa16.62■□□□□ 0.25
SMURF1-203ENST00000472627 FAM160B2Q86V87 743 aa16.62■□□□□ 0.25
SMURF1-203ENST00000472627 CCDC155Q8N6L0 562 aa16.62■□□□□ 0.25
SMURF1-203ENST00000472627 UIMC1Q96RL1 719 aa16.62■□□□□ 0.25
SMURF1-203ENST00000472627 C11orf16Q9NQ32 467 aa16.62■□□□□ 0.25
SMURF1-203ENST00000472627 TRMT13Q9NUP7 481 aaKnown RBP16.62■□□□□ 0.25
SMURF1-203ENST00000472627 EPOPA6NHQ4 379 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 MINDY4BA8MYZ0 360 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 HMMRO75330 724 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 SSTR3P32745 418 aaPredicted RBP16.61■□□□□ 0.25
SMURF1-203ENST00000472627 SBK1Q52WX2 424 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 SLFN13Q68D06 897 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 KRT40Q6A162 431 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 GIMAP6Q6P9H5 292 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 EEPD1Q7L9B9 569 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 FBXO16Q8IX29 292 aaPredicted RBP16.61■□□□□ 0.25
SMURF1-203ENST00000472627 GJD3Q8N144 294 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 MKL1Q969V6 931 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 TRERF1Q96PN7 1200 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 MTG1Q9BT17 334 aaPredicted RBP16.61■□□□□ 0.25
SMURF1-203ENST00000472627 ZBED2Q9BTP6 218 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 BCL11AQ9H165 835 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 KCNH6Q9H252 994 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 BOLA2Q9H3K6 86 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 ADD3Q9UEY8 706 aaKnown RBP16.61■□□□□ 0.25
SMURF1-203ENST00000472627 ZNF536O15090 1300 aa16.61■□□□□ 0.25
SMURF1-203ENST00000472627 SOWAHBA6NEL2 793 aa16.6■□□□□ 0.25
SMURF1-203ENST00000472627 KPNA6O60684 536 aa16.6■□□□□ 0.25
SMURF1-203ENST00000472627 MYL3P08590 195 aa16.6■□□□□ 0.25
SMURF1-203ENST00000472627 ALAS1P13196 640 aa16.6■□□□□ 0.25
SMURF1-203ENST00000472627 LRRFIP1Q32MZ4 808 aaKnown RBP16.6■□□□□ 0.25
SMURF1-203ENST00000472627 DUSP28Q4G0W2 176 aa16.6■□□□□ 0.25
SMURF1-203ENST00000472627 PPP4R3BQ5MIZ7 849 aa16.6■□□□□ 0.25
SMURF1-203ENST00000472627 MPHOSPH6Q99547 160 aaKnown RBP16.6■□□□□ 0.25
SMURF1-203ENST00000472627 GREB1LQ9C091 1923 aaPredicted RBP16.6■□□□□ 0.25
SMURF1-203ENST00000472627 REV3LO60673 3130 aa16.59■□□□□ 0.25
SMURF1-203ENST00000472627 TMEM232C9JQI7 657 aa16.59■□□□□ 0.25
SMURF1-203ENST00000472627 IQCF3P0C7M6 154 aa16.59■□□□□ 0.25
SMURF1-203ENST00000472627 ATP5JP18859 108 aa16.59■□□□□ 0.25
SMURF1-203ENST00000472627 MRE11P49959 708 aa16.59■□□□□ 0.25
SMURF1-203ENST00000472627 PTPN11Q06124 597 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms