RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 FBXO11Q86XK2 927 aa17.54■□□□□ 0.4
SNX13-205ENST00000471744 ANKRD35Q8N283 1001 aa17.54■□□□□ 0.4
SNX13-205ENST00000471744 DDX11Q96FC9 970 aa17.54■□□□□ 0.4
SNX13-205ENST00000471744 AMNQ9BXJ7 453 aa17.54■□□□□ 0.4
SNX13-205ENST00000471744 C22orf23Q9BZE7 217 aa17.54■□□□□ 0.4
SNX13-205ENST00000471744 ALDH8A1Q9H2A2 487 aaPredicted RBP17.54■□□□□ 0.4
SNX13-205ENST00000471744 HOMER2Q9NSB8 354 aa17.54■□□□□ 0.4
SNX13-205ENST00000471744 NAP1L2Q9ULW6 460 aaPredicted RBP17.54■□□□□ 0.4
SNX13-205ENST00000471744 DIS3Q9Y2L1 958 aaKnown RBP17.54■□□□□ 0.4
SNX13-205ENST00000471744 NID2Q14112 1375 aa17.53■□□□□ 0.4
SNX13-205ENST00000471744 RBBP6Q7Z6E9 1792 aaKnown RBP17.53■□□□□ 0.4
SNX13-205ENST00000471744 GOLGA8AA7E2F4 631 aa17.53■□□□□ 0.4
SNX13-205ENST00000471744 GOLGA8BA8MQT2 603 aa17.53■□□□□ 0.4
SNX13-205ENST00000471744 HMGCRP04035 888 aa17.53■□□□□ 0.4
SNX13-205ENST00000471744 RXRAP19793 462 aa17.53■□□□□ 0.4
SNX13-205ENST00000471744 METAP2P50579 478 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNX13-205ENST00000471744 APOBRQ0VD83 1088 aa17.53■□□□□ 0.4
SNX13-205ENST00000471744 TMTC3Q6ZXV5 915 aa17.53■□□□□ 0.4
SNX13-205ENST00000471744 IL27Q8NEV9 243 aa17.53■□□□□ 0.4
SNX13-205ENST00000471744 RRP36Q96EU6 259 aaKnown RBP17.53■□□□□ 0.4
SNX13-205ENST00000471744 BIN2Q9UBW5 565 aaPredicted RBP17.53■□□□□ 0.4
SNX13-205ENST00000471744 SEC63Q9UGP8 760 aaKnown RBP17.53■□□□□ 0.4
SNX13-205ENST00000471744 PNMA6FA0A0J9YX94 578 aa17.52■□□□□ 0.4
SNX13-205ENST00000471744 CYTH3O43739 400 aa17.52■□□□□ 0.4
SNX13-205ENST00000471744 RBM25P49756 843 aaKnown RBP17.52■□□□□ 0.4
SNX13-205ENST00000471744 TOB2Q14106 344 aaPredicted RBP17.52■□□□□ 0.4
SNX13-205ENST00000471744 OLFML2BQ68BL8 750 aa17.52■□□□□ 0.4
SNX13-205ENST00000471744 CCDC144CPQ8IYA2 1237 aa17.52■□□□□ 0.4
SNX13-205ENST00000471744 MRPL11Q9Y3B7 192 aaKnown RBP17.52■□□□□ 0.4
SNX13-205ENST00000471744 DNAJC25-GNG10A0A024R161 153 aa17.51■□□□□ 0.39
SNX13-205ENST00000471744 COBLO75128 1261 aa17.51■□□□□ 0.39
SNX13-205ENST00000471744 ELNP15502 786 aa17.51■□□□□ 0.39
SNX13-205ENST00000471744 USH1GQ495M9 461 aa17.51■□□□□ 0.39
SNX13-205ENST00000471744 MFSD14CQ5VZR4 134 aa17.51■□□□□ 0.39
SNX13-205ENST00000471744 HOMER1Q86YM7 354 aa17.51■□□□□ 0.39
SNX13-205ENST00000471744 MCF2L2Q86YR7 1114 aa17.51■□□□□ 0.39
SNX13-205ENST00000471744 RAB11FIP4Q86YS3 637 aa17.51■□□□□ 0.39
SNX13-205ENST00000471744 SRBD1Q8N5C6 995 aaKnown RBP17.51■□□□□ 0.39
SNX13-205ENST00000471744 MSL3Q8N5Y2 521 aaKnown RBP17.51■□□□□ 0.39
SNX13-205ENST00000471744 RGS22Q8NE09 1264 aa17.51■□□□□ 0.39
SNX13-205ENST00000471744 SH3TC2Q8TF17 1288 aa17.51■□□□□ 0.39
SNX13-205ENST00000471744 TRIB2Q92519 343 aa17.51■□□□□ 0.39
SNX13-205ENST00000471744 ZNF274Q96GC6 653 aaPredicted RBP17.51■□□□□ 0.39
SNX13-205ENST00000471744 ZNF333Q96JL9 665 aa17.51■□□□□ 0.39
SNX13-205ENST00000471744 PIGSQ96S52 555 aa17.51■□□□□ 0.39
SNX13-205ENST00000471744 A1CFQ9NQ94 594 aaKnown RBP17.51■□□□□ 0.39
SNX13-205ENST00000471744 PLEKHA8P1O95397 391 aa17.5■□□□□ 0.39
SNX13-205ENST00000471744 SLC35G1Q2M3R5 365 aa17.5■□□□□ 0.39
SNX13-205ENST00000471744 ZNF792Q3KQV3 632 aa17.5■□□□□ 0.39
SNX13-205ENST00000471744 MUM1L1Q5H9M0 696 aa17.5■□□□□ 0.39
SNX13-205ENST00000471744 ZNF467Q7Z7K2 595 aaPredicted RBP17.5■□□□□ 0.39
SNX13-205ENST00000471744 SAMD3Q8N6K7 520 aa17.5■□□□□ 0.39
SNX13-205ENST00000471744 NPLOC4Q8TAT6 608 aa17.5■□□□□ 0.39
SNX13-205ENST00000471744 RBM27Q9P2N5 1060 aaKnown RBP17.5■□□□□ 0.39
SNX13-205ENST00000471744 PCDHA1Q9Y5I3 950 aa17.5■□□□□ 0.39
SNX13-205ENST00000471744 MCM3APO60318 1980 aa17.49■□□□□ 0.39
SNX13-205ENST00000471744 POTEB2H3BUK9 544 aa17.49■□□□□ 0.39
SNX13-205ENST00000471744 INHAP05111 366 aa17.49■□□□□ 0.39
SNX13-205ENST00000471744 PGK2P07205 417 aa17.49■□□□□ 0.39
SNX13-205ENST00000471744 PDIA3P30101 505 aaKnown RBP17.49■□□□□ 0.39
SNX13-205ENST00000471744 NEK4P51957 841 aa17.49■□□□□ 0.39
SNX13-205ENST00000471744 NSMFQ6X4W1 530 aa17.49■□□□□ 0.39
SNX13-205ENST00000471744 CLEC4DQ8WXI8 215 aa17.49■□□□□ 0.39
SNX13-205ENST00000471744 MAML3Q96JK9 1138 aa17.49■□□□□ 0.39
SNX13-205ENST00000471744 BACH2Q9BYV9 841 aa17.49■□□□□ 0.39
SNX13-205ENST00000471744 MAP3K20Q9NYL2 800 aaKnown RBP17.49■□□□□ 0.39
SNX13-205ENST00000471744 CYP39A1Q9NYL5 469 aa17.49■□□□□ 0.39
SNX13-205ENST00000471744 LOC102724159A0A0B4J2E5 919 aa17.48■□□□□ 0.39
SNX13-205ENST00000471744 NFIBO00712 420 aa17.48■□□□□ 0.39
SNX13-205ENST00000471744 PWP2Q15269 919 aaKnown RBP17.48■□□□□ 0.39
SNX13-205ENST00000471744 CCL14Q16627 93 aa17.48■□□□□ 0.39
SNX13-205ENST00000471744 RNF207Q6ZRF8 634 aa17.48■□□□□ 0.39
SNX13-205ENST00000471744 FAM133AQ8N9E0 248 aa17.48■□□□□ 0.39
SNX13-205ENST00000471744 TMEM106CQ9BVX2 250 aa17.48■□□□□ 0.39
SNX13-205ENST00000471744 FAM217BQ9NTX9 383 aaPredicted RBP17.48■□□□□ 0.39
SNX13-205ENST00000471744 ADD3Q9UEY8 706 aaKnown RBP17.48■□□□□ 0.39
SNX13-205ENST00000471744 NRBP1Q9UHY1 535 aa17.48■□□□□ 0.39
SNX13-205ENST00000471744 CNTNAP5Q8WYK1 1306 aa17.47■□□□□ 0.39
SNX13-205ENST00000471744 LCTP09848 1927 aa17.47■□□□□ 0.39
SNX13-205ENST00000471744 PTPDC1A2A3K4 754 aa17.47■□□□□ 0.39
SNX13-205ENST00000471744 hCG_1984214I3L0E3 225 aa17.47■□□□□ 0.39
SNX13-205ENST00000471744 IGHA2P01877 340 aa17.47■□□□□ 0.39
SNX13-205ENST00000471744 CAPN2P17655 700 aa17.47■□□□□ 0.39
SNX13-205ENST00000471744 CDC27P30260 824 aa17.47■□□□□ 0.39
SNX13-205ENST00000471744 CACNB1Q02641 598 aaPredicted RBP17.47■□□□□ 0.39
SNX13-205ENST00000471744 CPLX2Q6PUV4 134 aaKnown RBP17.47■□□□□ 0.39
SNX13-205ENST00000471744 ZNF713Q8N859 430 aaPredicted RBP17.47■□□□□ 0.39
SNX13-205ENST00000471744 RPTORQ8N122 1335 aa17.47■□□□□ 0.39
SNX13-205ENST00000471744 SYNGAP1Q96PV0 1343 aa17.47■□□□□ 0.39
SNX13-205ENST00000471744 ASB14A6NK59 587 aa17.46■□□□□ 0.39
SNX13-205ENST00000471744 PPP1R11O60927 126 aaPredicted RBP17.46■□□□□ 0.39
SNX13-205ENST00000471744 PRKAR2AP13861 404 aaKnown RBP17.46■□□□□ 0.39
SNX13-205ENST00000471744 TAL1P17542 331 aaPredicted RBP17.46■□□□□ 0.39
SNX13-205ENST00000471744 ADD1P35611 737 aaKnown RBP17.46■□□□□ 0.39
SNX13-205ENST00000471744 AK2P54819 239 aa17.46■□□□□ 0.39
SNX13-205ENST00000471744 FUT2Q10981 343 aa17.46■□□□□ 0.39
SNX13-205ENST00000471744 BAATQ14032 418 aaPredicted RBP17.46■□□□□ 0.39
SNX13-205ENST00000471744 RABEP1Q15276 862 aa17.46■□□□□ 0.39
SNX13-205ENST00000471744 MAP3K21Q5TCX8 1036 aa17.46■□□□□ 0.39
SNX13-205ENST00000471744 MAMDC4Q6UXC1 1216 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms