RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 RNF146Q9NTX7 359 aa17.67■□□□□ 0.42
COMMD6-208ENST00000471682 SRRDQ9UH36 339 aa17.67■□□□□ 0.42
COMMD6-208ENST00000471682 GJD2Q9UKL4 321 aa17.67■□□□□ 0.42
COMMD6-208ENST00000471682 MRPL11Q9Y3B7 192 aaKnown RBP17.67■□□□□ 0.42
COMMD6-208ENST00000471682 CASP8AP2Q9UKL3 1982 aa17.66■□□□□ 0.42
COMMD6-208ENST00000471682 IRF5Q13568 498 aa17.66■□□□□ 0.42
COMMD6-208ENST00000471682 KCTD2Q14681 263 aa17.66■□□□□ 0.42
COMMD6-208ENST00000471682 OTOP1Q7RTM1 612 aa17.66■□□□□ 0.42
COMMD6-208ENST00000471682 CTU1Q7Z7A3 348 aaKnown RBP17.66■□□□□ 0.42
COMMD6-208ENST00000471682 TRIM22Q8IYM9 498 aa17.66■□□□□ 0.42
COMMD6-208ENST00000471682 NUDT12Q9BQG2 462 aa17.66■□□□□ 0.42
COMMD6-208ENST00000471682 NCOA5Q9HCD5 579 aaKnown RBP17.66■□□□□ 0.42
COMMD6-208ENST00000471682 MAP3K20Q9NYL2 800 aaKnown RBP17.66■□□□□ 0.42
COMMD6-208ENST00000471682 PCDHA1Q9Y5I3 950 aa17.66■□□□□ 0.42
COMMD6-208ENST00000471682 V9GY48 417 aaPredicted RBP17.66■□□□□ 0.42
COMMD6-208ENST00000471682 ZNF236Q9UL36 1845 aa17.65■□□□□ 0.42
COMMD6-208ENST00000471682 MYH6P13533 1939 aa17.65■□□□□ 0.42
COMMD6-208ENST00000471682 PPP1R11O60927 126 aaPredicted RBP17.65■□□□□ 0.42
COMMD6-208ENST00000471682 HOXC6P09630 235 aa17.65■□□□□ 0.42
COMMD6-208ENST00000471682 XRCC5P13010 732 aaKnown RBP17.65■□□□□ 0.42
COMMD6-208ENST00000471682 CAP1Q01518 475 aa17.65■□□□□ 0.42
COMMD6-208ENST00000471682 AKAP17AQ02040 695 aaKnown RBP17.65■□□□□ 0.42
COMMD6-208ENST00000471682 GHRHRQ02643 423 aa17.65■□□□□ 0.42
COMMD6-208ENST00000471682 STK3Q13188 491 aa17.65■□□□□ 0.42
COMMD6-208ENST00000471682 WDR78Q5VTH9 848 aa17.65■□□□□ 0.42
COMMD6-208ENST00000471682 MCF2L2Q86YR7 1114 aa17.65■□□□□ 0.42
COMMD6-208ENST00000471682 FAM177A1Q8N128 213 aaPredicted RBP17.65■□□□□ 0.42
COMMD6-208ENST00000471682 CCDC82Q8N4S0 544 aa17.65■□□□□ 0.42
COMMD6-208ENST00000471682 USP6NLQ92738 828 aa17.65■□□□□ 0.42
COMMD6-208ENST00000471682 MMP19Q99542 508 aa17.65■□□□□ 0.42
COMMD6-208ENST00000471682 LLPHQ9BRT6 129 aaKnown RBP17.65■□□□□ 0.42
COMMD6-208ENST00000471682 SLC5A4Q9NY91 659 aa17.65■□□□□ 0.42
COMMD6-208ENST00000471682 PFASO15067 1338 aa17.65■□□□□ 0.42
COMMD6-208ENST00000471682 STK36Q9NRP7 1315 aa17.65■□□□□ 0.42
COMMD6-208ENST00000471682 DOCK3Q8IZD9 2030 aa17.64■□□□□ 0.41
COMMD6-208ENST00000471682 LARGE1O95461 756 aa17.64■□□□□ 0.41
COMMD6-208ENST00000471682 RGS2P41220 211 aa17.64■□□□□ 0.41
COMMD6-208ENST00000471682 SSRP1Q08945 709 aaKnown RBP17.64■□□□□ 0.41
COMMD6-208ENST00000471682 MAP2K5Q13163 448 aa17.64■□□□□ 0.41
COMMD6-208ENST00000471682 PFKFB3Q16875 520 aaPredicted RBP17.64■□□□□ 0.41
COMMD6-208ENST00000471682 USH1GQ495M9 461 aa17.64■□□□□ 0.41
COMMD6-208ENST00000471682 PPP1R18Q6NYC8 613 aa17.64■□□□□ 0.41
COMMD6-208ENST00000471682 NOL8Q76FK4 1167 aaKnown RBP17.64■□□□□ 0.41
COMMD6-208ENST00000471682 CLEC4DQ8WXI8 215 aa17.64■□□□□ 0.41
COMMD6-208ENST00000471682 SNX21Q969T3 373 aa17.64■□□□□ 0.41
COMMD6-208ENST00000471682 DIS3Q9Y2L1 958 aaKnown RBP17.64■□□□□ 0.41
COMMD6-208ENST00000471682 TRIM17Q9Y577 477 aa17.64■□□□□ 0.41
COMMD6-208ENST00000471682 DNAJC25-GNG10A0A024R161 153 aa17.63■□□□□ 0.41
COMMD6-208ENST00000471682 DEXIO95424 95 aa17.63■□□□□ 0.41
COMMD6-208ENST00000471682 ADORA2AP29274 412 aa17.63■□□□□ 0.41
COMMD6-208ENST00000471682 TRMT44Q8IYL2 757 aaKnown RBP17.63■□□□□ 0.41
COMMD6-208ENST00000471682 ANKRD35Q8N283 1001 aa17.63■□□□□ 0.41
COMMD6-208ENST00000471682 A1CFQ9NQ94 594 aaKnown RBP17.63■□□□□ 0.41
COMMD6-208ENST00000471682 HOMER2Q9NSB8 354 aa17.63■□□□□ 0.41
COMMD6-208ENST00000471682 SMCHD1A6NHR9 2005 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 LOC102724159A0A0B4J2E5 919 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 CD2BP2O95400 341 aaKnown RBP17.62■□□□□ 0.41
COMMD6-208ENST00000471682 SCG2P13521 617 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 SLC4A3P48751 1232 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 FLT3LGP49771 235 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 PRKCZQ05513 592 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 PWP2Q15269 919 aaKnown RBP17.62■□□□□ 0.41
COMMD6-208ENST00000471682 PKN1Q16512 942 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 MUM1L1Q5H9M0 696 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 NECAB1Q8N987 351 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 PXYLP1Q8TE99 480 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 CCDC12Q8WUD4 166 aaPredicted RBP17.62■□□□□ 0.41
COMMD6-208ENST00000471682 PHKBQ93100 1093 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 DDX11Q96FC9 970 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 TMX3Q96JJ7 454 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 APBA2Q99767 749 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 SLC26A6Q9BXS9 759 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 GLT8D2Q9H1C3 349 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 SH3GLB2Q9NR46 395 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 BARHL2Q9NY43 387 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 PTPN22Q9Y2R2 807 aa17.62■□□□□ 0.41
COMMD6-208ENST00000471682 PLXNB2O15031 1838 aa17.61■□□□□ 0.41
COMMD6-208ENST00000471682 NFIBO00712 420 aa17.61■□□□□ 0.41
COMMD6-208ENST00000471682 CTDNEP1O95476 244 aa17.61■□□□□ 0.41
COMMD6-208ENST00000471682 RNF207Q6ZRF8 634 aa17.61■□□□□ 0.41
COMMD6-208ENST00000471682 ZNF467Q7Z7K2 595 aaPredicted RBP17.61■□□□□ 0.41
COMMD6-208ENST00000471682 DPP9Q86TI2 863 aa17.61■□□□□ 0.41
COMMD6-208ENST00000471682 MSL3Q8N5Y2 521 aaKnown RBP17.61■□□□□ 0.41
COMMD6-208ENST00000471682 PIBF1Q8WXW3 757 aa17.61■□□□□ 0.41
COMMD6-208ENST00000471682 WASF1Q92558 559 aa17.61■□□□□ 0.41
COMMD6-208ENST00000471682 CYP39A1Q9NYL5 469 aa17.61■□□□□ 0.41
COMMD6-208ENST00000471682 ESYT2A0FGR8 921 aa17.6■□□□□ 0.41
COMMD6-208ENST00000471682 PIK3CDO00329 1044 aa17.6■□□□□ 0.41
COMMD6-208ENST00000471682 HSD17B4P51659 736 aa17.6■□□□□ 0.41
COMMD6-208ENST00000471682 HMGN5P82970 282 aaKnown RBP17.6■□□□□ 0.41
COMMD6-208ENST00000471682 ST3GAL1Q11201 340 aa17.6■□□□□ 0.41
COMMD6-208ENST00000471682 ZNF792Q3KQV3 632 aa17.6■□□□□ 0.41
COMMD6-208ENST00000471682 WWC2Q6AWC2 1192 aa17.6■□□□□ 0.41
COMMD6-208ENST00000471682 FBXO46Q6PJ61 603 aaPredicted RBP17.6■□□□□ 0.41
COMMD6-208ENST00000471682 HEATR3Q7Z4Q2 680 aa17.6■□□□□ 0.41
COMMD6-208ENST00000471682 FAM133AQ8N9E0 248 aa17.6■□□□□ 0.41
COMMD6-208ENST00000471682 NSUN7Q8NE18 718 aaKnown RBP17.6■□□□□ 0.41
COMMD6-208ENST00000471682 CCDC148Q8NFR7 591 aa17.6■□□□□ 0.41
COMMD6-208ENST00000471682 RAET1EQ8TD07 263 aa17.6■□□□□ 0.41
COMMD6-208ENST00000471682 GABRQQ9UN88 632 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms