RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 RASGRP2Q7LDG7 609 aa15.83■□□□□ 0.12
HMGN1-211ENST00000471260 PCSK9Q8NBP7 692 aaKnown RBP15.83■□□□□ 0.12
HMGN1-211ENST00000471260 KATNBL1Q9H079 304 aa15.83■□□□□ 0.12
HMGN1-211ENST00000471260 GPCPD1Q9NPB8 672 aa15.83■□□□□ 0.12
HMGN1-211ENST00000471260 FRMPD2Q68DX3 1309 aaPredicted RBP15.83■□□□□ 0.12
HMGN1-211ENST00000471260 SYNRGQ9UMZ2 1314 aa15.83■□□□□ 0.12
HMGN1-211ENST00000471260 LAMA4Q16363 1823 aa15.82■□□□□ 0.12
HMGN1-211ENST00000471260 SOWAHBA6NEL2 793 aa15.82■□□□□ 0.12
HMGN1-211ENST00000471260 ANP32AP39687 249 aaKnown RBP15.82■□□□□ 0.12
HMGN1-211ENST00000471260 GJA9P57773 515 aa15.82■□□□□ 0.12
HMGN1-211ENST00000471260 SNAP25P60880 206 aa15.82■□□□□ 0.12
HMGN1-211ENST00000471260 NKX3-2P78367 333 aa15.82■□□□□ 0.12
HMGN1-211ENST00000471260 TRIM60Q495X7 471 aa15.82■□□□□ 0.12
HMGN1-211ENST00000471260 CCSAPQ6IQ19 270 aaPredicted RBP15.82■□□□□ 0.12
HMGN1-211ENST00000471260 PNMA1Q8ND90 353 aa15.82■□□□□ 0.12
HMGN1-211ENST00000471260 FERMT2Q96AC1 680 aa15.82■□□□□ 0.12
HMGN1-211ENST00000471260 ZSCAN10Q96SZ4 725 aaPredicted RBP15.82■□□□□ 0.12
HMGN1-211ENST00000471260 UPF3AQ9H1J1 476 aaKnown RBP15.82■□□□□ 0.12
HMGN1-211ENST00000471260 KAT14Q9H8E8 782 aa15.82■□□□□ 0.12
HMGN1-211ENST00000471260 ZSWIM5Q9P217 1185 aa15.82■□□□□ 0.12
HMGN1-211ENST00000471260 ADD3Q9UEY8 706 aaKnown RBP15.82■□□□□ 0.12
HMGN1-211ENST00000471260 WDR19Q8NEZ3 1342 aa15.82■□□□□ 0.12
HMGN1-211ENST00000471260 A0A1W2PQ45 241 aaPredicted RBP15.81■□□□□ 0.12
HMGN1-211ENST00000471260 A0A1W2PQY0 241 aa15.81■□□□□ 0.12
HMGN1-211ENST00000471260 B4E1Z4 1266 aa15.81■□□□□ 0.12
HMGN1-211ENST00000471260 ACLYP53396 1101 aa15.81■□□□□ 0.12
HMGN1-211ENST00000471260 MDM2Q00987 491 aaPredicted RBP15.81■□□□□ 0.12
HMGN1-211ENST00000471260 KCNA10Q16322 511 aa15.81■□□□□ 0.12
HMGN1-211ENST00000471260 NSMFQ6X4W1 530 aa15.81■□□□□ 0.12
HMGN1-211ENST00000471260 MORC4Q8TE76 937 aa15.81■□□□□ 0.12
HMGN1-211ENST00000471260 TOX2Q96NM4 488 aa15.81■□□□□ 0.12
HMGN1-211ENST00000471260 ZKSCAN3Q9BRR0 538 aa15.81■□□□□ 0.12
HMGN1-211ENST00000471260 STARD7Q9NQZ5 370 aa15.81■□□□□ 0.12
HMGN1-211ENST00000471260 SZT2Q5T011 3432 aa15.8■□□□□ 0.12
HMGN1-211ENST00000471260 LAMA3Q16787 3333 aa15.8■□□□□ 0.12
HMGN1-211ENST00000471260 ELP1O95163 1332 aa15.8■□□□□ 0.12
HMGN1-211ENST00000471260 CHMLP26374 656 aa15.8■□□□□ 0.12
HMGN1-211ENST00000471260 ASPRV1Q53RT3 343 aa15.8■□□□□ 0.12
HMGN1-211ENST00000471260 IQSEC1Q6DN90 963 aa15.8■□□□□ 0.12
HMGN1-211ENST00000471260 ENAHQ8N8S7 591 aaPredicted RBP15.8■□□□□ 0.12
HMGN1-211ENST00000471260 LENG1Q96BZ8 264 aaPredicted RBP15.8■□□□□ 0.12
HMGN1-211ENST00000471260 GLT1D1Q96MS3 346 aa15.8■□□□□ 0.12
HMGN1-211ENST00000471260 UBAC1Q9BSL1 405 aa15.8■□□□□ 0.12
HMGN1-211ENST00000471260 Q9Y3F1 56 aa15.8■□□□□ 0.12
HMGN1-211ENST00000471260 MCM3APO60318 1980 aa15.8■□□□□ 0.12
HMGN1-211ENST00000471260 TNKSO95271 1327 aa15.79■□□□□ 0.12
HMGN1-211ENST00000471260 MROH7Q68CQ1 1323 aa15.79■□□□□ 0.12
HMGN1-211ENST00000471260 C6orf222P0C671 652 aaPredicted RBP15.79■□□□□ 0.12
HMGN1-211ENST00000471260 TNFAIP2Q03169 654 aa15.79■□□□□ 0.12
HMGN1-211ENST00000471260 TLE2Q04725 743 aa15.79■□□□□ 0.12
HMGN1-211ENST00000471260 TRDNQ13061 729 aa15.79■□□□□ 0.12
HMGN1-211ENST00000471260 BAATQ14032 418 aaPredicted RBP15.79■□□□□ 0.12
HMGN1-211ENST00000471260 ANKRD33Q7Z3H0 272 aa15.79■□□□□ 0.12
HMGN1-211ENST00000471260 RGS22Q8NE09 1264 aa15.79■□□□□ 0.12
HMGN1-211ENST00000471260 MPHOSPH6Q99547 160 aaKnown RBP15.79■□□□□ 0.12
HMGN1-211ENST00000471260 IL25Q9H293 177 aa15.79■□□□□ 0.12
HMGN1-211ENST00000471260 VTA1Q9NP79 307 aa15.79■□□□□ 0.12
HMGN1-211ENST00000471260 PDLIM7Q9NR12 457 aa15.79■□□□□ 0.12
HMGN1-211ENST00000471260 GNEQ9Y223 722 aaKnown RBP15.79■□□□□ 0.12
HMGN1-211ENST00000471260 U3KPZ7 1027 aaPredicted RBP15.79■□□□□ 0.12
HMGN1-211ENST00000471260 ASTN1O14525 1302 aa15.78■□□□□ 0.12
HMGN1-211ENST00000471260 SOX1O00570 391 aaPredicted RBP15.78■□□□□ 0.12
HMGN1-211ENST00000471260 NFIBO00712 420 aa15.78■□□□□ 0.12
HMGN1-211ENST00000471260 ADCY6O43306 1168 aa15.78■□□□□ 0.12
HMGN1-211ENST00000471260 CLTBP09497 229 aa15.78■□□□□ 0.12
HMGN1-211ENST00000471260 GNASQ5JWF2 1037 aa15.78■□□□□ 0.12
HMGN1-211ENST00000471260 RNF207Q6ZRF8 634 aa15.78■□□□□ 0.12
HMGN1-211ENST00000471260 DNERQ8NFT8 737 aa15.78■□□□□ 0.12
HMGN1-211ENST00000471260 CLEC4DQ8WXI8 215 aa15.78■□□□□ 0.12
HMGN1-211ENST00000471260 SEZ6LQ9BYH1 1024 aa15.78■□□□□ 0.12
HMGN1-211ENST00000471260 PRDM5Q9NQX1 630 aaPredicted RBP15.78■□□□□ 0.12
HMGN1-211ENST00000471260 DNAH12Q6ZR08 3092 aa15.78■□□□□ 0.12
HMGN1-211ENST00000471260 PTPDC1A2A3K4 754 aa15.77■□□□□ 0.12
HMGN1-211ENST00000471260 MYADML2A6NDP7 307 aa15.77■□□□□ 0.12
HMGN1-211ENST00000471260 DCDC2CA8MYV0 355 aa15.77■□□□□ 0.12
HMGN1-211ENST00000471260 B4DLN1 442 aa15.77■□□□□ 0.12
HMGN1-211ENST00000471260 SGSM2O43147 1006 aa15.77■□□□□ 0.12
HMGN1-211ENST00000471260 CABYRO75952 493 aa15.77■□□□□ 0.12
HMGN1-211ENST00000471260 ASGR1P07306 291 aa15.77■□□□□ 0.12
HMGN1-211ENST00000471260 PARP1P09874 1014 aaKnown RBP15.77■□□□□ 0.12
HMGN1-211ENST00000471260 ALDH5A1P51649 535 aaPredicted RBP15.77■□□□□ 0.12
HMGN1-211ENST00000471260 MRPL12P52815 198 aaKnown RBP15.77■□□□□ 0.12
HMGN1-211ENST00000471260 IFIT1BQ5T764 474 aaKnown RBP15.77■□□□□ 0.12
HMGN1-211ENST00000471260 TAPT1Q6NXT6 567 aa15.77■□□□□ 0.12
HMGN1-211ENST00000471260 LRCH3Q96II8 777 aa15.77■□□□□ 0.12
HMGN1-211ENST00000471260 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.76■□□□□ 0.11
HMGN1-211ENST00000471260 TRIM43BA6NCK2 446 aa15.76■□□□□ 0.11
HMGN1-211ENST00000471260 KIAA0355O15063 1070 aa15.76■□□□□ 0.11
HMGN1-211ENST00000471260 ZEB2O60315 1214 aa15.76■□□□□ 0.11
HMGN1-211ENST00000471260 GOLGA8HP0CJ92 632 aa15.76■□□□□ 0.11
HMGN1-211ENST00000471260 CDK7P50613 346 aa15.76■□□□□ 0.11
HMGN1-211ENST00000471260 RPS6P62753 249 aaKnown RBP15.76■□□□□ 0.11
HMGN1-211ENST00000471260 NOL8Q76FK4 1167 aaKnown RBP15.76■□□□□ 0.11
HMGN1-211ENST00000471260 TLK2Q86UE8 772 aa15.76■□□□□ 0.11
HMGN1-211ENST00000471260 ADGRF4Q8IZF3 695 aa15.76■□□□□ 0.11
HMGN1-211ENST00000471260 TRIM43Q96BQ3 446 aaPredicted RBP15.76■□□□□ 0.11
HMGN1-211ENST00000471260 UBA5Q9GZZ9 404 aa15.76■□□□□ 0.11
HMGN1-211ENST00000471260 AP5M1Q9H0R1 490 aa15.76■□□□□ 0.11
HMGN1-211ENST00000471260 ABCB11O95342 1321 aa15.75■□□□□ 0.11
HMGN1-211ENST00000471260 A0A0U1RQG5 324 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms