RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 PDE4BQ07343 736 aa13.47□□□□□ -0.25
MRPL40-203ENST00000471259 ADGRE1Q14246 886 aa13.47□□□□□ -0.25
MRPL40-203ENST00000471259 TMEM67Q5HYA8 995 aa13.47□□□□□ -0.25
MRPL40-203ENST00000471259 CXCL17Q6UXB2 119 aa13.47□□□□□ -0.25
MRPL40-203ENST00000471259 GPATCH3Q96I76 525 aa13.47□□□□□ -0.25
MRPL40-203ENST00000471259 MPHOSPH6Q99547 160 aaKnown RBP13.47□□□□□ -0.25
MRPL40-203ENST00000471259 NACAP1Q9BZK3 213 aa13.47□□□□□ -0.25
MRPL40-203ENST00000471259 POLR3EQ9NVU0 708 aa13.47□□□□□ -0.25
MRPL40-203ENST00000471259 MYH7P12883 1935 aa13.47□□□□□ -0.25
MRPL40-203ENST00000471259 LOC102724159A0A0B4J2E5 919 aa13.46□□□□□ -0.25
MRPL40-203ENST00000471259 ERC2O15083 957 aa13.46□□□□□ -0.25
MRPL40-203ENST00000471259 DYNC1LI2O43237 492 aaPredicted RBP13.46□□□□□ -0.25
MRPL40-203ENST00000471259 TSPY3P0CV98 308 aa13.46□□□□□ -0.25
MRPL40-203ENST00000471259 TSPY8P0CW00 308 aa13.46□□□□□ -0.25
MRPL40-203ENST00000471259 ATP2A2P16615 1042 aaKnown RBP13.46□□□□□ -0.25
MRPL40-203ENST00000471259 RFC2P35250 354 aa13.46□□□□□ -0.25
MRPL40-203ENST00000471259 TDO2P48775 406 aa13.46□□□□□ -0.25
MRPL40-203ENST00000471259 PWP2Q15269 919 aaKnown RBP13.46□□□□□ -0.25
MRPL40-203ENST00000471259 SLFN13Q68D06 897 aa13.46□□□□□ -0.25
MRPL40-203ENST00000471259 MICALL1Q8N3F8 863 aa13.46□□□□□ -0.25
MRPL40-203ENST00000471259 FAM133AQ8N9E0 248 aa13.46□□□□□ -0.25
MRPL40-203ENST00000471259 STRBPQ96SI9 672 aaKnown RBP13.46□□□□□ -0.25
MRPL40-203ENST00000471259 NOC4LQ9BVI4 516 aaKnown RBP13.46□□□□□ -0.25
MRPL40-203ENST00000471259 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.46□□□□□ -0.25
MRPL40-203ENST00000471259 PUS7LQ9H0K6 701 aaKnown RBP13.46□□□□□ -0.25
MRPL40-203ENST00000471259 VTA1Q9NP79 307 aa13.46□□□□□ -0.25
MRPL40-203ENST00000471259 GPHNQ9NQX3 736 aaPredicted RBP13.46□□□□□ -0.25
MRPL40-203ENST00000471259 HOMER2Q9NSB8 354 aa13.46□□□□□ -0.25
MRPL40-203ENST00000471259 MTMR4Q9NYA4 1195 aa13.46□□□□□ -0.25
MRPL40-203ENST00000471259 GNEQ9Y223 722 aaKnown RBP13.46□□□□□ -0.25
MRPL40-203ENST00000471259 NCOR1O75376 2440 aa13.45□□□□□ -0.26
MRPL40-203ENST00000471259 RAD50Q92878 1312 aa13.45□□□□□ -0.26
MRPL40-203ENST00000471259 APPP05067 770 aa13.45□□□□□ -0.26
MRPL40-203ENST00000471259 POU3F3P20264 500 aaPredicted RBP13.45□□□□□ -0.26
MRPL40-203ENST00000471259 SLC1A4P43007 532 aa13.45□□□□□ -0.26
MRPL40-203ENST00000471259 CCL23P55773 120 aa13.45□□□□□ -0.26
MRPL40-203ENST00000471259 BEX3Q00994 111 aa13.45□□□□□ -0.26
MRPL40-203ENST00000471259 PHOSPHO2Q8TCD6 241 aa13.45□□□□□ -0.26
MRPL40-203ENST00000471259 STAG1Q8WVM7 1258 aa13.45□□□□□ -0.26
MRPL40-203ENST00000471259 SLC9A7Q96T83 725 aa13.45□□□□□ -0.26
MRPL40-203ENST00000471259 LRRCC1Q9C099 1032 aa13.45□□□□□ -0.26
MRPL40-203ENST00000471259 RNF146Q9NTX7 359 aa13.45□□□□□ -0.26
MRPL40-203ENST00000471259 ADD3Q9UEY8 706 aaKnown RBP13.45□□□□□ -0.26
MRPL40-203ENST00000471259 PNMA2Q9UL42 364 aa13.45□□□□□ -0.26
MRPL40-203ENST00000471259 GREB1LQ9C091 1923 aaPredicted RBP13.45□□□□□ -0.26
MRPL40-203ENST00000471259 MYH4Q9Y623 1939 aa13.45□□□□□ -0.26
MRPL40-203ENST00000471259 MCM3APO60318 1980 aa13.44□□□□□ -0.26
MRPL40-203ENST00000471259 TMEM232C9JQI7 657 aa13.44□□□□□ -0.26
MRPL40-203ENST00000471259 ADCY6O43306 1168 aa13.44□□□□□ -0.26
MRPL40-203ENST00000471259 PLA2G6O60733 806 aa13.44□□□□□ -0.26
MRPL40-203ENST00000471259 BMP1P13497 986 aa13.44□□□□□ -0.26
MRPL40-203ENST00000471259 CPT1AP50416 773 aa13.44□□□□□ -0.26
MRPL40-203ENST00000471259 CNTN2Q02246 1040 aa13.44□□□□□ -0.26
MRPL40-203ENST00000471259 RETREG2Q8NC44 543 aa13.44□□□□□ -0.26
MRPL40-203ENST00000471259 APPBP2Q92624 585 aa13.44□□□□□ -0.26
MRPL40-203ENST00000471259 CEP95Q96GE4 821 aa13.44□□□□□ -0.26
MRPL40-203ENST00000471259 FGD4Q96M96 766 aa13.44□□□□□ -0.26
MRPL40-203ENST00000471259 TRERF1Q96PN7 1200 aa13.44□□□□□ -0.26
MRPL40-203ENST00000471259 KATNBL1Q9H079 304 aa13.44□□□□□ -0.26
MRPL40-203ENST00000471259 A1CFQ9NQ94 594 aaKnown RBP13.44□□□□□ -0.26
MRPL40-203ENST00000471259 YBX2Q9Y2T7 364 aaKnown RBP13.44□□□□□ -0.26
MRPL40-203ENST00000471259 IGKV6D-41A0A0C4DH26 115 aa13.43□□□□□ -0.26
MRPL40-203ENST00000471259 GSG1L2A8MUP6 293 aa13.43□□□□□ -0.26
MRPL40-203ENST00000471259 B4DLN1 442 aa13.43□□□□□ -0.26
MRPL40-203ENST00000471259 CTAGE5O15320 804 aa13.43□□□□□ -0.26
MRPL40-203ENST00000471259 B4GALT4O60513 344 aa13.43□□□□□ -0.26
MRPL40-203ENST00000471259 KPNA6O60684 536 aa13.43□□□□□ -0.26
MRPL40-203ENST00000471259 ALAS1P13196 640 aa13.43□□□□□ -0.26
MRPL40-203ENST00000471259 MRPL12P52815 198 aaKnown RBP13.43□□□□□ -0.26
MRPL40-203ENST00000471259 KIAA1211Q6ZU35 1233 aa13.43□□□□□ -0.26
MRPL40-203ENST00000471259 STK11IPQ8N1F8 1099 aa13.43□□□□□ -0.26
MRPL40-203ENST00000471259 KBTBD3Q8NAB2 608 aa13.43□□□□□ -0.26
MRPL40-203ENST00000471259 NEDD1Q8NHV4 660 aa13.43□□□□□ -0.26
MRPL40-203ENST00000471259 PANK1Q8TE04 598 aa13.43□□□□□ -0.26
MRPL40-203ENST00000471259 GMCL1Q96IK5 515 aa13.43□□□□□ -0.26
MRPL40-203ENST00000471259 ALDH8A1Q9H2A2 487 aaPredicted RBP13.43□□□□□ -0.26
MRPL40-203ENST00000471259 ECHDC1Q9NTX5 307 aa13.43□□□□□ -0.26
MRPL40-203ENST00000471259 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.42□□□□□ -0.26
MRPL40-203ENST00000471259 NKRFO15226 690 aaKnown RBP eCLIP13.42□□□□□ -0.26
MRPL40-203ENST00000471259 SMPD1P17405 629 aa13.42□□□□□ -0.26
MRPL40-203ENST00000471259 IRX5P78411 483 aaPredicted RBP13.42□□□□□ -0.26
MRPL40-203ENST00000471259 HNRNPUQ00839 825 aaKnown RBP eCLIP13.42□□□□□ -0.26
MRPL40-203ENST00000471259 BFSP2Q13515 415 aa13.42□□□□□ -0.26
MRPL40-203ENST00000471259 SLFNL1Q499Z3 407 aa13.42□□□□□ -0.26
MRPL40-203ENST00000471259 DUSP28Q4G0W2 176 aa13.42□□□□□ -0.26
MRPL40-203ENST00000471259 CCDC155Q8N6L0 562 aa13.42□□□□□ -0.26
MRPL40-203ENST00000471259 TRPV6Q9H1D0 765 aa13.42□□□□□ -0.26
MRPL40-203ENST00000471259 PLIN4Q96Q06 1357 aa13.42□□□□□ -0.26
MRPL40-203ENST00000471259 MUC3AQ02505 3323 aa13.42□□□□□ -0.26
MRPL40-203ENST00000471259 TNKSO95271 1327 aa13.41□□□□□ -0.26
MRPL40-203ENST00000471259 PATL2C9JE40 543 aaKnown RBP13.41□□□□□ -0.26
MRPL40-203ENST00000471259 SMIM22K7EJ46 135 aa13.41□□□□□ -0.26
MRPL40-203ENST00000471259 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
MRPL40-203ENST00000471259 RNF113AO15541 343 aaKnown RBP13.41□□□□□ -0.26
MRPL40-203ENST00000471259 BAIAP3O94812 1187 aa13.41□□□□□ -0.26
MRPL40-203ENST00000471259 RABGGTBP53611 331 aa13.41□□□□□ -0.26
MRPL40-203ENST00000471259 PTPN11Q06124 597 aaPredicted RBP13.41□□□□□ -0.26
MRPL40-203ENST00000471259 TMEM31Q5JXX7 168 aa13.41□□□□□ -0.26
MRPL40-203ENST00000471259 RCSD1Q6JBY9 416 aa13.41□□□□□ -0.26
MRPL40-203ENST00000471259 LRRC47Q8N1G4 583 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms