RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 JAKMIP1Q96N16 626 aaKnown RBP17.67■□□□□ 0.42
ABCF3-208ENST00000471226 DEFB118Q96PH6 123 aa17.67■□□□□ 0.42
ABCF3-208ENST00000471226 TINF2Q9BSI4 451 aa17.67■□□□□ 0.42
ABCF3-208ENST00000471226 CRISPLD2Q9H0B8 497 aa17.67■□□□□ 0.42
ABCF3-208ENST00000471226 VAT1LQ9HCJ6 419 aa17.67■□□□□ 0.42
ABCF3-208ENST00000471226 PFASO15067 1338 aa17.67■□□□□ 0.42
ABCF3-208ENST00000471226 CYTH3O43739 400 aa17.66■□□□□ 0.42
ABCF3-208ENST00000471226 TRPV1Q8NER1 839 aa17.66■□□□□ 0.42
ABCF3-208ENST00000471226 NUP133Q8WUM0 1156 aa17.66■□□□□ 0.42
ABCF3-208ENST00000471226 MYL10Q9BUA6 226 aa17.66■□□□□ 0.42
ABCF3-208ENST00000471226 CYP39A1Q9NYL5 469 aa17.66■□□□□ 0.42
ABCF3-208ENST00000471226 POTEB2H3BUK9 544 aa17.65■□□□□ 0.42
ABCF3-208ENST00000471226 NFIBO00712 420 aa17.65■□□□□ 0.42
ABCF3-208ENST00000471226 DHX16O60231 1041 aaKnown RBP17.65■□□□□ 0.42
ABCF3-208ENST00000471226 CALM1P0DP23 149 aa17.65■□□□□ 0.42
ABCF3-208ENST00000471226 CALM2P0DP24 149 aa17.65■□□□□ 0.42
ABCF3-208ENST00000471226 CALM3P0DP25 149 aa17.65■□□□□ 0.42
ABCF3-208ENST00000471226 PSMA5P28066 241 aa17.65■□□□□ 0.42
ABCF3-208ENST00000471226 SMARCA1P28370 1054 aa17.65■□□□□ 0.42
ABCF3-208ENST00000471226 CNTN2Q02246 1040 aa17.65■□□□□ 0.42
ABCF3-208ENST00000471226 BLOC1S2Q6QNY1 142 aa17.65■□□□□ 0.42
ABCF3-208ENST00000471226 FBXL16Q8N461 479 aa17.65■□□□□ 0.42
ABCF3-208ENST00000471226 CTCFLQ8NI51 663 aaPredicted RBP17.65■□□□□ 0.42
ABCF3-208ENST00000471226 NRBP1Q9UHY1 535 aa17.65■□□□□ 0.42
ABCF3-208ENST00000471226 SLC12A7Q9Y666 1083 aa17.65■□□□□ 0.42
ABCF3-208ENST00000471226 SYNGAP1Q96PV0 1343 aa17.65■□□□□ 0.42
ABCF3-208ENST00000471226 SOWAHBA6NEL2 793 aa17.64■□□□□ 0.41
ABCF3-208ENST00000471226 ZBTB5O15062 677 aa17.64■□□□□ 0.41
ABCF3-208ENST00000471226 CPA1P15085 419 aa17.64■□□□□ 0.41
ABCF3-208ENST00000471226 KIF5BP33176 963 aa17.64■□□□□ 0.41
ABCF3-208ENST00000471226 MLLT1Q03111 559 aaPredicted RBP17.64■□□□□ 0.41
ABCF3-208ENST00000471226 USH1GQ495M9 461 aa17.64■□□□□ 0.41
ABCF3-208ENST00000471226 LHX8Q68G74 356 aa17.64■□□□□ 0.41
ABCF3-208ENST00000471226 APOA5Q6Q788 366 aa17.64■□□□□ 0.41
ABCF3-208ENST00000471226 NSMFQ6X4W1 530 aa17.64■□□□□ 0.41
ABCF3-208ENST00000471226 FBXO11Q86XK2 927 aa17.64■□□□□ 0.41
ABCF3-208ENST00000471226 RGS22Q8NE09 1264 aa17.64■□□□□ 0.41
ABCF3-208ENST00000471226 MAF1Q9H063 256 aa17.64■□□□□ 0.41
ABCF3-208ENST00000471226 BRPF3Q9ULD4 1205 aa17.64■□□□□ 0.41
ABCF3-208ENST00000471226 ABCB11O95342 1321 aa17.64■□□□□ 0.41
ABCF3-208ENST00000471226 TNRC18O15417 2968 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-208ENST00000471226 PDE4DIPQ5VU43 2346 aa17.63■□□□□ 0.41
ABCF3-208ENST00000471226 PPP1R11O60927 126 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-208ENST00000471226 SNAI1O95863 264 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-208ENST00000471226 RXRAP19793 462 aa17.63■□□□□ 0.41
ABCF3-208ENST00000471226 RPS6KB1P23443 525 aa17.63■□□□□ 0.41
ABCF3-208ENST00000471226 GNAQP50148 359 aa17.63■□□□□ 0.41
ABCF3-208ENST00000471226 BAATQ14032 418 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-208ENST00000471226 PRAMEF19Q5SWL8 479 aa17.63■□□□□ 0.41
ABCF3-208ENST00000471226 FANCBQ8NB91 859 aa17.63■□□□□ 0.41
ABCF3-208ENST00000471226 PIGSQ96S52 555 aa17.63■□□□□ 0.41
ABCF3-208ENST00000471226 LZTS2Q9BRK4 669 aa17.63■□□□□ 0.41
ABCF3-208ENST00000471226 SPZ1Q9BXG8 430 aa17.63■□□□□ 0.41
ABCF3-208ENST00000471226 AMNQ9BXJ7 453 aa17.63■□□□□ 0.41
ABCF3-208ENST00000471226 AGXT2Q9BYV1 514 aa17.63■□□□□ 0.41
ABCF3-208ENST00000471226 TM6SF1Q9BZW5 370 aa17.63■□□□□ 0.41
ABCF3-208ENST00000471226 ZSWIM6Q9HCJ5 1215 aa17.63■□□□□ 0.41
ABCF3-208ENST00000471226 OGDHLQ9ULD0 1010 aa17.63■□□□□ 0.41
ABCF3-208ENST00000471226 LRRC37A2A6NM11 1700 aa17.62■□□□□ 0.41
ABCF3-208ENST00000471226 EIF5BO60841 1220 aaKnown RBP17.62■□□□□ 0.41
ABCF3-208ENST00000471226 TFRCP02786 760 aaKnown RBP17.62■□□□□ 0.41
ABCF3-208ENST00000471226 ZNF865P0CJ78 1059 aaPredicted RBP17.62■□□□□ 0.41
ABCF3-208ENST00000471226 CASTP20810 708 aaKnown RBP17.62■□□□□ 0.41
ABCF3-208ENST00000471226 SYNE3Q6ZMZ3 975 aa17.62■□□□□ 0.41
ABCF3-208ENST00000471226 RNF207Q6ZRF8 634 aa17.62■□□□□ 0.41
ABCF3-208ENST00000471226 Q6ZUG5 572 aa17.62■□□□□ 0.41
ABCF3-208ENST00000471226 UBE2Q1Q7Z7E8 422 aa17.62■□□□□ 0.41
ABCF3-208ENST00000471226 DDX20Q9UHI6 824 aaKnown RBP17.62■□□□□ 0.41
ABCF3-208ENST00000471226 MRPL11Q9Y3B7 192 aaKnown RBP17.62■□□□□ 0.41
ABCF3-208ENST00000471226 ASTN1O14525 1302 aa17.62■□□□□ 0.41
ABCF3-208ENST00000471226 MKI67P46013 3256 aaKnown RBP17.61■□□□□ 0.41
ABCF3-208ENST00000471226 PNMA6FA0A0J9YX94 578 aa17.61■□□□□ 0.41
ABCF3-208ENST00000471226 PTPDC1A2A3K4 754 aa17.61■□□□□ 0.41
ABCF3-208ENST00000471226 SEPT4O43236 478 aa17.61■□□□□ 0.41
ABCF3-208ENST00000471226 MSCO60682 206 aa17.61■□□□□ 0.41
ABCF3-208ENST00000471226 PLEKHA8P1O95397 391 aa17.61■□□□□ 0.41
ABCF3-208ENST00000471226 CNGA1P29973 690 aa17.61■□□□□ 0.41
ABCF3-208ENST00000471226 RCAN1P53805 252 aa17.61■□□□□ 0.41
ABCF3-208ENST00000471226 RPS6P62753 249 aaKnown RBP17.61■□□□□ 0.41
ABCF3-208ENST00000471226 RUFY3Q7L099 469 aa17.61■□□□□ 0.41
ABCF3-208ENST00000471226 MICU3Q86XE3 530 aa17.61■□□□□ 0.41
ABCF3-208ENST00000471226 HOMER1Q86YM7 354 aa17.61■□□□□ 0.41
ABCF3-208ENST00000471226 RAB11FIP4Q86YS3 637 aa17.61■□□□□ 0.41
ABCF3-208ENST00000471226 CCDC144CPQ8IYA2 1237 aa17.61■□□□□ 0.41
ABCF3-208ENST00000471226 SRBD1Q8N5C6 995 aaKnown RBP17.61■□□□□ 0.41
ABCF3-208ENST00000471226 ANKLE1Q8NAG6 615 aa17.61■□□□□ 0.41
ABCF3-208ENST00000471226 PURBQ96QR8 312 aaKnown RBP17.61■□□□□ 0.41
ABCF3-208ENST00000471226 KLF18A0A0U1RQI7 1052 aa17.6■□□□□ 0.41
ABCF3-208ENST00000471226 ASB14A6NK59 587 aa17.6■□□□□ 0.41
ABCF3-208ENST00000471226 ZBTB43O43298 467 aa17.6■□□□□ 0.41
ABCF3-208ENST00000471226 SEC24BO95487 1268 aa17.6■□□□□ 0.41
ABCF3-208ENST00000471226 MNX1P50219 401 aaPredicted RBP17.6■□□□□ 0.41
ABCF3-208ENST00000471226 TRAF1Q13077 416 aa17.6■□□□□ 0.41
ABCF3-208ENST00000471226 SLC30A10Q6XR72 485 aa17.6■□□□□ 0.41
ABCF3-208ENST00000471226 TMTC3Q6ZXV5 915 aa17.6■□□□□ 0.41
ABCF3-208ENST00000471226 ARMCX2Q7L311 632 aa17.6■□□□□ 0.41
ABCF3-208ENST00000471226 MORC4Q8TE76 937 aa17.6■□□□□ 0.41
ABCF3-208ENST00000471226 TBC1D5Q92609 795 aa17.6■□□□□ 0.41
ABCF3-208ENST00000471226 KATNBL1Q9H079 304 aa17.6■□□□□ 0.41
ABCF3-208ENST00000471226 ABHD16BQ9H3Z7 469 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms