RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 XPNPEP3Q9NQH7 507 aa18.33■□□□□ 0.52
HDAC6-218ENST00000470942 FAM184BQ9ULE4 1060 aa18.33■□□□□ 0.52
HDAC6-218ENST00000470942 WDR19Q8NEZ3 1342 aa18.32■□□□□ 0.52
HDAC6-218ENST00000470942 PTPDC1A2A3K4 754 aa18.32■□□□□ 0.52
HDAC6-218ENST00000470942 ASB14A6NK59 587 aa18.32■□□□□ 0.52
HDAC6-218ENST00000470942 NFIBO00712 420 aa18.32■□□□□ 0.52
HDAC6-218ENST00000470942 SLC27A2O14975 620 aa18.32■□□□□ 0.52
HDAC6-218ENST00000470942 BAATQ14032 418 aaPredicted RBP18.32■□□□□ 0.52
HDAC6-218ENST00000470942 CDC37Q16543 378 aaPredicted RBP18.32■□□□□ 0.52
HDAC6-218ENST00000470942 USH1GQ495M9 461 aa18.32■□□□□ 0.52
HDAC6-218ENST00000470942 TMEM67Q5HYA8 995 aa18.32■□□□□ 0.52
HDAC6-218ENST00000470942 CREB3L3Q68CJ9 461 aa18.32■□□□□ 0.52
HDAC6-218ENST00000470942 MB21D2Q8IYB1 491 aaPredicted RBP18.32■□□□□ 0.52
HDAC6-218ENST00000470942 ABHD16BQ9H3Z7 469 aa18.32■□□□□ 0.52
HDAC6-218ENST00000470942 LCTP09848 1927 aa18.31■□□□□ 0.52
HDAC6-218ENST00000470942 CENPBP07199 599 aaPredicted RBP18.31■□□□□ 0.52
HDAC6-218ENST00000470942 ANTXR2P58335 489 aa18.31■□□□□ 0.52
HDAC6-218ENST00000470942 LRRC41Q15345 812 aa18.31■□□□□ 0.52
HDAC6-218ENST00000470942 STAG2Q8N3U4 1231 aa18.31■□□□□ 0.52
HDAC6-218ENST00000470942 LENG1Q96BZ8 264 aaPredicted RBP18.31■□□□□ 0.52
HDAC6-218ENST00000470942 SENP2Q9HC62 589 aa18.31■□□□□ 0.52
HDAC6-218ENST00000470942 KLRF2D3W0D1 207 aa18.3■□□□□ 0.52
HDAC6-218ENST00000470942 PGK1P00558 417 aa18.3■□□□□ 0.52
HDAC6-218ENST00000470942 CALML3P27482 149 aa18.3■□□□□ 0.52
HDAC6-218ENST00000470942 ATN1P54259 1190 aaPredicted RBP18.3■□□□□ 0.52
HDAC6-218ENST00000470942 NECTIN1Q15223 517 aa18.3■□□□□ 0.52
HDAC6-218ENST00000470942 LRRC26Q2I0M4 334 aa18.3■□□□□ 0.52
HDAC6-218ENST00000470942 RNF207Q6ZRF8 634 aa18.3■□□□□ 0.52
HDAC6-218ENST00000470942 RNF180Q86T96 592 aa18.3■□□□□ 0.52
HDAC6-218ENST00000470942 CLEC4DQ8WXI8 215 aa18.3■□□□□ 0.52
HDAC6-218ENST00000470942 PURBQ96QR8 312 aaKnown RBP18.3■□□□□ 0.52
HDAC6-218ENST00000470942 JMJD4Q9H9V9 463 aa18.3■□□□□ 0.52
HDAC6-218ENST00000470942 ADD3Q9UEY8 706 aaKnown RBP18.3■□□□□ 0.52
HDAC6-218ENST00000470942 MAD2L2Q9UI95 211 aa18.3■□□□□ 0.52
HDAC6-218ENST00000470942 PRC1O43663 620 aa18.29■□□□□ 0.52
HDAC6-218ENST00000470942 MCM5P33992 734 aa18.29■□□□□ 0.52
HDAC6-218ENST00000470942 QRICH1Q2TAL8 776 aa18.29■□□□□ 0.52
HDAC6-218ENST00000470942 CCDC144BQ3MJ40 725 aa18.29■□□□□ 0.52
HDAC6-218ENST00000470942 RNF20Q5VTR2 975 aa18.29■□□□□ 0.52
HDAC6-218ENST00000470942 CATIPQ7Z7H3 387 aa18.29■□□□□ 0.52
HDAC6-218ENST00000470942 IGDCC4Q8TDY8 1250 aa18.29■□□□□ 0.52
HDAC6-218ENST00000470942 DDX49Q9Y6V7 483 aaKnown RBP18.29■□□□□ 0.52
HDAC6-218ENST00000470942 BAZ2BQ9UIF8 2168 aaKnown RBP18.28■□□□□ 0.52
HDAC6-218ENST00000470942 ABCB11O95342 1321 aa18.28■□□□□ 0.52
HDAC6-218ENST00000470942 PALM3A6NDB9 673 aaPredicted RBP18.28■□□□□ 0.52
HDAC6-218ENST00000470942 ADCYAP1R1P41586 468 aa18.28■□□□□ 0.52
HDAC6-218ENST00000470942 GRM4Q14833 912 aa18.28■□□□□ 0.52
HDAC6-218ENST00000470942 CHRDL2Q6WN34 429 aa18.28■□□□□ 0.52
HDAC6-218ENST00000470942 SLC30A10Q6XR72 485 aa18.28■□□□□ 0.52
HDAC6-218ENST00000470942 FBXO11Q86XK2 927 aa18.28■□□□□ 0.52
HDAC6-218ENST00000470942 FERMT2Q96AC1 680 aa18.28■□□□□ 0.52
HDAC6-218ENST00000470942 PPP4R2Q9NY27 417 aa18.28■□□□□ 0.52
HDAC6-218ENST00000470942 ZMYND8Q9ULU4 1186 aaPredicted RBP18.28■□□□□ 0.52
HDAC6-218ENST00000470942 COLQQ9Y215 455 aaPredicted RBP18.28■□□□□ 0.52
HDAC6-218ENST00000470942 ASTN1O14525 1302 aa18.27■□□□□ 0.52
HDAC6-218ENST00000470942 DUSP11O75319 330 aaKnown RBP18.27■□□□□ 0.52
HDAC6-218ENST00000470942 ALDH5A1P51649 535 aaPredicted RBP18.27■□□□□ 0.52
HDAC6-218ENST00000470942 RPS6P62753 249 aaKnown RBP18.27■□□□□ 0.52
HDAC6-218ENST00000470942 NFXL1Q6ZNB6 911 aa18.27■□□□□ 0.52
HDAC6-218ENST00000470942 NOL8Q76FK4 1167 aaKnown RBP18.27■□□□□ 0.52
HDAC6-218ENST00000470942 EEPD1Q7L9B9 569 aa18.27■□□□□ 0.52
HDAC6-218ENST00000470942 NUP133Q8WUM0 1156 aa18.27■□□□□ 0.52
HDAC6-218ENST00000470942 KATNBL1Q9H079 304 aa18.27■□□□□ 0.52
HDAC6-218ENST00000470942 GPHNQ9NQX3 736 aaPredicted RBP18.27■□□□□ 0.52
HDAC6-218ENST00000470942 DNAH12Q6ZR08 3092 aa18.26■□□□□ 0.51
HDAC6-218ENST00000470942 SYNRGQ9UMZ2 1314 aa18.26■□□□□ 0.51
HDAC6-218ENST00000470942 SYN1P17600 705 aa18.26■□□□□ 0.51
HDAC6-218ENST00000470942 TROAPQ12815 778 aa18.26■□□□□ 0.51
HDAC6-218ENST00000470942 SLC39A5Q6ZMH5 540 aa18.26■□□□□ 0.51
HDAC6-218ENST00000470942 TMEM87BQ96K49 555 aa18.26■□□□□ 0.51
HDAC6-218ENST00000470942 MTA3Q9BTC8 594 aa18.26■□□□□ 0.51
HDAC6-218ENST00000470942 LY9Q9HBG7 655 aa18.26■□□□□ 0.51
HDAC6-218ENST00000470942 SPC25Q9HBM1 224 aa18.26■□□□□ 0.51
HDAC6-218ENST00000470942 MRPL11Q9Y3B7 192 aaKnown RBP18.26■□□□□ 0.51
HDAC6-218ENST00000470942 LRRC37A2A6NM11 1700 aa18.26■□□□□ 0.51
HDAC6-218ENST00000470942 CCDC69A6NI79 296 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 ADCY6O43306 1168 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 ADAMTS4O75173 837 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 C6orf222P0C671 652 aaPredicted RBP18.25■□□□□ 0.51
HDAC6-218ENST00000470942 RTP1P59025 263 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 TNFAIP2Q03169 654 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 HABP4Q5JVS0 413 aaKnown RBP18.25■□□□□ 0.51
HDAC6-218ENST00000470942 ERICH6BQ5W0A0 696 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 HOMER1Q86YM7 354 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 MCF2L2Q86YR7 1114 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 FBXO16Q8IX29 292 aaPredicted RBP18.25■□□□□ 0.51
HDAC6-218ENST00000470942 ZNF654Q8IZM8 581 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 TMTC2Q8N394 836 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 RGS22Q8NE09 1264 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 TBC1D5Q92609 795 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 MPHOSPH6Q99547 160 aaKnown RBP18.25■□□□□ 0.51
HDAC6-218ENST00000470942 AMNQ9BXJ7 453 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 PHF24Q9UPV7 400 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 ATP11BQ9Y2G3 1177 aa18.25■□□□□ 0.51
HDAC6-218ENST00000470942 LOC102724159A0A0B4J2E5 919 aa18.24■□□□□ 0.51
HDAC6-218ENST00000470942 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.24■□□□□ 0.51
HDAC6-218ENST00000470942 SH2B2O14492 632 aaPredicted RBP18.24■□□□□ 0.51
HDAC6-218ENST00000470942 ZBTB5O15062 677 aa18.24■□□□□ 0.51
HDAC6-218ENST00000470942 PWP2Q15269 919 aaKnown RBP18.24■□□□□ 0.51
HDAC6-218ENST00000470942 CTCFLQ8NI51 663 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms