RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 COMMD10Q9Y6G5 202 aa6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 ZMYM6O95789 1325 aa6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 DYTNA2CJ06 578 aa6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 GGPS1O95749 300 aa6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 GFAPP14136 432 aa6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 CDC42EP1Q00587 391 aa6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 TFDP1Q14186 410 aa6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 TNNI3KQ59H18 835 aa6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 COL13A1Q5TAT6 717 aaPredicted RBP6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 DPP9Q86TI2 863 aa6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 CCDC124Q96CT7 223 aaKnown RBP6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 TBC1D31Q96DN5 1066 aa6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 CAPZA3Q96KX2 299 aa6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 KIFC3Q9BVG8 833 aa6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 SUGT1Q9Y2Z0 365 aa6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 FPGT-TNNI3KV9GXZ4 949 aa6.74□□□□□ -1.33
CCDC144A-212ENST00000470068 LMTK2Q8IWU2 1503 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 CARNS1A5YM72 827 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 HOXC9P31274 260 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 USP14P54578 494 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 DRP2Q13474 957 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 SPATA1Q5VX52 437 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 C4orf22Q6V702 233 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 CLEC17AQ6ZS10 378 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 TRMT2AQ8IZ69 625 aaKnown RBP6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 PROM2Q8N271 834 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 AOPEPQ8N6M6 819 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 GIMAP8Q8ND71 665 aaPredicted RBP6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 WHAMMQ8TF30 809 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 CDKL2Q92772 493 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 EFHD1Q9BUP0 239 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 CCDC8Q9H0W5 538 aaPredicted RBP6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 POLR3EQ9NVU0 708 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 AMFRQ9UKV5 643 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 A0A1W2PP64 1363 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 ARHGEF40Q8TER5 1519 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 KBTBD13C9JR72 458 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 ARHGAP4P98171 946 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 LAMB3Q13751 1172 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 MICU3Q86XE3 530 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 TDRD7Q8NHU6 1098 aaKnown RBP6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 MASTLQ96GX5 879 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 EMILIN1Q9Y6C2 1016 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 EFCAB6Q5THR3 1501 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 ANO9A1A5B4 782 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 IRS4O14654 1257 aaPredicted RBP6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 HIBADHP31937 336 aaKnown RBP6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 GCKRQ14397 625 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 LMBR1LQ6UX01 489 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 GSTA5Q7RTV2 222 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 EFHBQ8N7U6 833 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 IGSF22Q8N9C0 903 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 ARHGEF35A5YM69 484 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 PPP1R12AO14974 1030 aaPredicted RBP6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 NR1I2O75469 434 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 APOA4P06727 396 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 KRT3P12035 628 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 INPP5BP32019 993 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 FOSBP53539 338 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 AK2P54819 239 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 CCNA1P78396 465 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 NLGN2Q8NFZ4 835 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 PPP4R1Q8TF05 950 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 UBA5Q9GZZ9 404 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 DHX36Q9H2U1 1008 aaKnown RBP6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 ZSWIM6Q9HCJ5 1215 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 SPATA31E1Q6ZUB1 1445 aa6.73□□□□□ -1.33
CCDC144A-212ENST00000470068 PLSCR1O15162 318 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 CUL1Q13616 776 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 ZBTB8OSQ8IWT0 167 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 SUGP1Q8IWZ8 645 aaKnown RBP6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 ARHGAP18Q8N392 663 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 GTF3C2Q8WUA4 911 aaPredicted RBP6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 POP5Q969H6 163 aaKnown RBP6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 SLC52A2Q9HAB3 445 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 GGA1Q9UJY5 639 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 FAF1Q9UNN5 650 aaPredicted RBP6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 PREX2Q70Z35 1606 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 MYO3BQ8WXR4 1341 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 MIF4GDA9UHW6 222 aaKnown RBP6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 KRT16P08779 473 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 MXRA7P84157 204 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 FANCCQ00597 558 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 PKN2Q16513 984 aaKnown RBP6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 FAM160B1Q5W0V3 765 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 SARM1Q6SZW1 724 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 COPS6Q7L5N1 327 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 GTF3C6Q969F1 213 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 PASKQ96RG2 1323 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 SLC27A2O14975 620 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 HCLS1P14317 486 aaPredicted RBP6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 STAT1P42224 750 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 MAGEA1P43355 309 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 PRPF38BQ5VTL8 546 aaKnown RBP6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 SYDE1Q6ZW31 735 aaPredicted RBP6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 ENOSF1Q7L5Y1 443 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 PCGF5Q86SE9 256 aa6.72□□□□□ -1.33
CCDC144A-212ENST00000470068 FAM160B2Q86V87 743 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms