RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 MMTAG2Q9BU76 263 aaKnown RBP16.51■□□□□ 0.23
CBWD3-205ENST00000469687 NAA15Q9BXJ9 866 aaKnown RBP16.51■□□□□ 0.23
CBWD3-205ENST00000469687 MRFAP1Q9Y605 127 aa16.51■□□□□ 0.23
CBWD3-205ENST00000469687 SPAG1Q07617 926 aa16.51■□□□□ 0.23
CBWD3-205ENST00000469687 SOGA3Q5TF21 947 aa16.51■□□□□ 0.23
CBWD3-205ENST00000469687 REXO1Q8N1G1 1221 aaKnown RBP16.51■□□□□ 0.23
CBWD3-205ENST00000469687 UBXN4Q92575 508 aa16.51■□□□□ 0.23
CBWD3-205ENST00000469687 NUP88Q99567 741 aaPredicted RBP16.51■□□□□ 0.23
CBWD3-205ENST00000469687 RIOX1Q9H6W3 641 aa16.51■□□□□ 0.23
CBWD3-205ENST00000469687 KLRG2A4D1S0 409 aaPredicted RBP16.5■□□□□ 0.23
CBWD3-205ENST00000469687 H7C1D1 291 aa16.5■□□□□ 0.23
CBWD3-205ENST00000469687 EDIL3O43854 480 aa16.5■□□□□ 0.23
CBWD3-205ENST00000469687 FECHP22830 423 aa16.5■□□□□ 0.23
CBWD3-205ENST00000469687 SCNN1DP51172 638 aa16.5■□□□□ 0.23
CBWD3-205ENST00000469687 GIMAP8Q8ND71 665 aaPredicted RBP16.5■□□□□ 0.23
CBWD3-205ENST00000469687 HPS3Q969F9 1004 aa16.5■□□□□ 0.23
CBWD3-205ENST00000469687 SRRTQ9BXP5 876 aaKnown RBP16.5■□□□□ 0.23
CBWD3-205ENST00000469687 TRIM9Q9C026 710 aa16.5■□□□□ 0.23
CBWD3-205ENST00000469687 GPCPD1Q9NPB8 672 aa16.5■□□□□ 0.23
CBWD3-205ENST00000469687 BRWD3Q6RI45 1802 aa16.5■□□□□ 0.23
CBWD3-205ENST00000469687 FCER1AP12319 257 aa16.5■□□□□ 0.23
CBWD3-205ENST00000469687 DOK7Q18PE1 504 aa16.5■□□□□ 0.23
CBWD3-205ENST00000469687 PROM2Q8N271 834 aa16.5■□□□□ 0.23
CBWD3-205ENST00000469687 TTF2Q9UNY4 1162 aaKnown RBP16.5■□□□□ 0.23
CBWD3-205ENST00000469687 MYH4Q9Y623 1939 aa16.49■□□□□ 0.23
CBWD3-205ENST00000469687 PLIN4Q96Q06 1357 aa16.49■□□□□ 0.23
CBWD3-205ENST00000469687 PES1O00541 588 aaKnown RBP16.49■□□□□ 0.23
CBWD3-205ENST00000469687 SLC37A4O43826 429 aa16.49■□□□□ 0.23
CBWD3-205ENST00000469687 TXKP42681 527 aa16.49■□□□□ 0.23
CBWD3-205ENST00000469687 STK4Q13043 487 aa16.49■□□□□ 0.23
CBWD3-205ENST00000469687 TTI2Q6NXR4 508 aa16.49■□□□□ 0.23
CBWD3-205ENST00000469687 SP8Q8IXZ3 490 aa16.49■□□□□ 0.23
CBWD3-205ENST00000469687 ANKRD20A12PQ8NF67 263 aa16.49■□□□□ 0.23
CBWD3-205ENST00000469687 TRIM47Q96LD4 638 aa16.49■□□□□ 0.23
CBWD3-205ENST00000469687 TRPC5Q9UL62 973 aaPredicted RBP16.49■□□□□ 0.23
CBWD3-205ENST00000469687 EFCAB8A8MWE9 144 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 NKRFO15226 690 aaKnown RBP eCLIP16.48■□□□□ 0.23
CBWD3-205ENST00000469687 TDP2O95551 362 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 TPM1P09493 284 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 KRT9P35527 623 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 PPP2R3AQ06190 1150 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 SLC27A3Q5K4L6 730 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 TTBK2Q6IQ55 1244 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 AK8Q96MA6 479 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 CHP1Q99653 195 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 DUSP9Q99956 384 aaKnown RBP16.48■□□□□ 0.23
CBWD3-205ENST00000469687 ATP6V0A2Q9Y487 856 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 IGKV6D-41A0A0C4DH26 115 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 PSMA7O14818 248 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 SMARCA1P28370 1054 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 ASIC1P78348 528 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 PDE4DQ08499 809 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 CCDC51Q96ER9 411 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 MYH7BA7E2Y1 1941 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 QSER1Q2KHR3 1735 aa16.48■□□□□ 0.23
CBWD3-205ENST00000469687 TTC26A0AVF1 554 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 PPP1R11O60927 126 aaPredicted RBP16.47■□□□□ 0.23
CBWD3-205ENST00000469687 TFRCP02786 760 aaKnown RBP16.47■□□□□ 0.23
CBWD3-205ENST00000469687 MYL1P05976 194 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 SNHG28P0DPA3 235 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 MB21D1Q8N884 522 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 ZNF507Q8TCN5 953 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 COA1Q9GZY4 146 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 USP40Q9NVE5 1235 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 ESYT2A0FGR8 921 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 LGALS16A8MUM7 142 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 SHMT1P34896 483 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 ZNF569Q5MCW4 686 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 ANKRD40Q6AI12 368 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 MTMR9Q96QG7 549 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 SLF1Q9BQI6 1058 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 THAP9Q9H5L6 903 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 FAM53CQ9NYF3 392 aa16.47■□□□□ 0.23
CBWD3-205ENST00000469687 POTEMA6NI47 508 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 B4DLN1 442 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 SLC16A2P36021 539 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 ADCY7P51828 1080 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 NFIAQ12857 509 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 STIM1Q13586 685 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 CALCRLQ16602 461 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 UBE2SQ16763 222 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 ASPRV1Q53RT3 343 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 TMTC1Q8IUR5 882 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 CSGALNACT2Q8N6G5 542 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 KIAA0895Q8NCT3 520 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 GJA10Q969M2 543 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 C7orf25Q9BPX7 421 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 ZC3H12CQ9C0D7 883 aaKnown RBP16.46■□□□□ 0.23
CBWD3-205ENST00000469687 CUEDC2Q9H467 287 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 ZSWIM4Q9H7M6 989 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 JMJD4Q9H9V9 463 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 KCNQ5Q9NR82 932 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 ST7Q9NRC1 585 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 EXOC1Q9NV70 894 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 SERPINB13Q9UIV8 391 aa16.46■□□□□ 0.23
CBWD3-205ENST00000469687 SRGNP10124 158 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 HSPA1LP34931 641 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 KLK7P49862 253 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 GRB10Q13322 594 aa16.45■□□□□ 0.22
CBWD3-205ENST00000469687 SHROOM1Q2M3G4 852 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms