RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 MCTP2Q6DN12 878 aa12.93□□□□□ -0.34
TRAIP-202ENST00000469027 ARMCX2Q7L311 632 aa12.93□□□□□ -0.34
TRAIP-202ENST00000469027 NEUROD6Q96NK8 337 aa12.93□□□□□ -0.34
TRAIP-202ENST00000469027 EP300Q09472 2414 aaPredicted RBP12.93□□□□□ -0.34
TRAIP-202ENST00000469027 ZFHX4Q86UP3 3567 aa12.92□□□□□ -0.34
TRAIP-202ENST00000469027 ASTN1O14525 1302 aa12.92□□□□□ -0.34
TRAIP-202ENST00000469027 A0A1B0GUL7 405 aa12.92□□□□□ -0.34
TRAIP-202ENST00000469027 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.92□□□□□ -0.34
TRAIP-202ENST00000469027 DYNC1LI2O43237 492 aaPredicted RBP12.92□□□□□ -0.34
TRAIP-202ENST00000469027 IQCF3P0C7M6 154 aa12.92□□□□□ -0.34
TRAIP-202ENST00000469027 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAIP-202ENST00000469027 NSUN3Q9H649 340 aaKnown RBP12.92□□□□□ -0.34
TRAIP-202ENST00000469027 CFAP47Q6ZTR5 3102 aa12.92□□□□□ -0.34
TRAIP-202ENST00000469027 MYO7AQ13402 2215 aa12.92□□□□□ -0.34
TRAIP-202ENST00000469027 MAP1BP46821 2468 aaKnown RBP12.91□□□□□ -0.34
TRAIP-202ENST00000469027 VPS13AQ96RL7 3174 aa12.91□□□□□ -0.34
TRAIP-202ENST00000469027 GJB5O95377 273 aa12.91□□□□□ -0.34
TRAIP-202ENST00000469027 NUBP1P53384 320 aa12.91□□□□□ -0.34
TRAIP-202ENST00000469027 PPP4CP60510 307 aa12.91□□□□□ -0.34
TRAIP-202ENST00000469027 SMAD4Q13485 552 aaKnown RBP12.91□□□□□ -0.34
TRAIP-202ENST00000469027 ZNF467Q7Z7K2 595 aaPredicted RBP12.91□□□□□ -0.34
TRAIP-202ENST00000469027 TTC6Q86TZ1 520 aa12.91□□□□□ -0.34
TRAIP-202ENST00000469027 EHD4Q9H223 541 aa12.91□□□□□ -0.34
TRAIP-202ENST00000469027 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
TRAIP-202ENST00000469027 TANC1Q9C0D5 1861 aa12.91□□□□□ -0.34
TRAIP-202ENST00000469027 SPTBN2O15020 2390 aa12.9□□□□□ -0.34
TRAIP-202ENST00000469027 VWA5AO00534 786 aa12.9□□□□□ -0.34
TRAIP-202ENST00000469027 RAD21O60216 631 aa12.9□□□□□ -0.34
TRAIP-202ENST00000469027 CENPBP07199 599 aaPredicted RBP12.9□□□□□ -0.34
TRAIP-202ENST00000469027 PTGS1P23219 599 aa12.9□□□□□ -0.34
TRAIP-202ENST00000469027 SHMT1P34896 483 aa12.9□□□□□ -0.34
TRAIP-202ENST00000469027 DYNLL1P63167 89 aaKnown RBP12.9□□□□□ -0.34
TRAIP-202ENST00000469027 NKX3-2P78367 333 aa12.9□□□□□ -0.34
TRAIP-202ENST00000469027 BFSP2Q13515 415 aa12.9□□□□□ -0.34
TRAIP-202ENST00000469027 PUM1Q14671 1186 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRAIP-202ENST00000469027 SNRNP48Q6IEG0 339 aaKnown RBP12.9□□□□□ -0.34
TRAIP-202ENST00000469027 ADGRA1Q86SQ6 560 aa12.9□□□□□ -0.34
TRAIP-202ENST00000469027 CCDC144CPQ8IYA2 1237 aa12.9□□□□□ -0.34
TRAIP-202ENST00000469027 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
TRAIP-202ENST00000469027 FBXO28Q9NVF7 368 aa12.9□□□□□ -0.34
TRAIP-202ENST00000469027 NOD1Q9Y239 953 aa12.9□□□□□ -0.34
TRAIP-202ENST00000469027 AKAP2Q9Y2D5 859 aa12.9□□□□□ -0.34
TRAIP-202ENST00000469027 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
TRAIP-202ENST00000469027 WDR46O15213 610 aaKnown RBP12.89□□□□□ -0.35
TRAIP-202ENST00000469027 NCK2O43639 380 aa12.89□□□□□ -0.35
TRAIP-202ENST00000469027 LTBRP36941 435 aa12.89□□□□□ -0.35
TRAIP-202ENST00000469027 GPM6BQ13491 265 aa12.89□□□□□ -0.35
TRAIP-202ENST00000469027 KIAA2013Q8IYS2 634 aa12.89□□□□□ -0.35
TRAIP-202ENST00000469027 ANKRD35Q8N283 1001 aa12.89□□□□□ -0.35
TRAIP-202ENST00000469027 MAGEB6Q8N7X4 407 aa12.89□□□□□ -0.35
TRAIP-202ENST00000469027 ASIC4Q96FT7 647 aa12.89□□□□□ -0.35
TRAIP-202ENST00000469027 USP44Q9H0E7 712 aa12.89□□□□□ -0.35
TRAIP-202ENST00000469027 SH2D4AQ9H788 454 aa12.89□□□□□ -0.35
TRAIP-202ENST00000469027 CD207Q9UJ71 328 aa12.89□□□□□ -0.35
TRAIP-202ENST00000469027 ZNF214Q9UL59 606 aaPredicted RBP12.89□□□□□ -0.35
TRAIP-202ENST00000469027 PARP14Q460N5 1801 aa12.89□□□□□ -0.35
TRAIP-202ENST00000469027 DMXL1Q9Y485 3027 aa12.89□□□□□ -0.35
TRAIP-202ENST00000469027 WDR87Q6ZQQ6 2873 aa12.88□□□□□ -0.35
TRAIP-202ENST00000469027 DNAJC25-GNG10A0A024R161 153 aa12.88□□□□□ -0.35
TRAIP-202ENST00000469027 MCAMP43121 646 aa12.88□□□□□ -0.35
TRAIP-202ENST00000469027 DLX2Q07687 328 aaPredicted RBP12.88□□□□□ -0.35
TRAIP-202ENST00000469027 COL19A1Q14993 1142 aa12.88□□□□□ -0.35
TRAIP-202ENST00000469027 EPC2Q52LR7 807 aa12.88□□□□□ -0.35
TRAIP-202ENST00000469027 CLEC10AQ8IUN9 316 aa12.88□□□□□ -0.35
TRAIP-202ENST00000469027 KCNG4Q8TDN1 519 aa12.88□□□□□ -0.35
TRAIP-202ENST00000469027 TEX13BQ9BXU2 312 aa12.88□□□□□ -0.35
TRAIP-202ENST00000469027 VCPKMTQ9H867 229 aa12.88□□□□□ -0.35
TRAIP-202ENST00000469027 RALYQ9UKM9 306 aaKnown RBP12.88□□□□□ -0.35
TRAIP-202ENST00000469027 GNEQ9Y223 722 aaKnown RBP12.88□□□□□ -0.35
TRAIP-202ENST00000469027 PDGFBP01127 241 aaPredicted RBP12.87□□□□□ -0.35
TRAIP-202ENST00000469027 POLR3DP05423 398 aaPredicted RBP12.87□□□□□ -0.35
TRAIP-202ENST00000469027 ZBTB33Q86T24 672 aa12.87□□□□□ -0.35
TRAIP-202ENST00000469027 PPP1R13LQ8WUF5 828 aa12.87□□□□□ -0.35
TRAIP-202ENST00000469027 IGFLR1Q9H665 355 aa12.87□□□□□ -0.35
TRAIP-202ENST00000469027 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
TRAIP-202ENST00000469027 SNRKQ9NRH2 765 aa12.87□□□□□ -0.35
TRAIP-202ENST00000469027 PPP1R9AQ9ULJ8 1098 aa12.87□□□□□ -0.35
TRAIP-202ENST00000469027 ADAMTS5Q9UNA0 930 aa12.87□□□□□ -0.35
TRAIP-202ENST00000469027 INSL6Q9Y581 213 aa12.87□□□□□ -0.35
TRAIP-202ENST00000469027 CTDP1Q9Y5B0 961 aaPredicted RBP12.87□□□□□ -0.35
TRAIP-202ENST00000469027 ZNF292O60281 2723 aa12.87□□□□□ -0.35
TRAIP-202ENST00000469027 DMDP11532 3685 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 CEP250Q9BV73 2442 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 CSPG5O95196 566 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 MYL3P08590 195 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 SMPD1P17405 629 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 ARID4AP29374 1257 aaPredicted RBP12.86□□□□□ -0.35
TRAIP-202ENST00000469027 ICA1Q05084 483 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 TFCP2Q12800 502 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 ACAP1Q15027 740 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 LRRFIP1Q32MZ4 808 aaKnown RBP12.86□□□□□ -0.35
TRAIP-202ENST00000469027 CNKSR3Q6P9H4 555 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 TMEM179Q6ZVK1 233 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 MRPL50Q8N5N7 158 aaKnown RBP12.86□□□□□ -0.35
TRAIP-202ENST00000469027 MIGA1Q8NAN2 632 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 SAMD11Q96NU1 681 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 HINFPQ9BQA5 517 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 KATNBL1Q9H079 304 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 POLR3EQ9NVU0 708 aa12.86□□□□□ -0.35
TRAIP-202ENST00000469027 E9PSI1 815 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms