RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 MYADML2A6NDP7 307 aa12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 B4E1Z4 1266 aa12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 ADCY6O43306 1168 aa12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 ZNF543Q08ER8 600 aa12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 SNX17Q15036 470 aa12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 LRIT3Q3SXY7 679 aa12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 IQCA1Q86XH1 822 aa12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 KLHDC9Q8NEP7 349 aa12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 TRIM43Q96BQ3 446 aaPredicted RBP12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 DSCC1Q9BVC3 393 aa12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 UBA5Q9GZZ9 404 aa12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 RANBP17Q9H2T7 1088 aaKnown RBP12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 PDLIM7Q9NR12 457 aa12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 TMEM39AQ9NV64 488 aa12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 CYP39A1Q9NYL5 469 aa12.49□□□□□ -0.41
TGFBR3-205ENST00000468996 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 DCDC2CA8MYV0 355 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 ASGR1P07306 291 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 CLTBP09497 229 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 CALML3P27482 149 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 BEX3Q00994 111 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 CCDC178Q5BJE1 867 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 TTC22Q5TAA0 569 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 C1orf53Q5VUE5 145 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 DGKHQ86XP1 1220 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 DEFB123Q8N688 67 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 PCSK9Q8NBP7 692 aaKnown RBP12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 GLT1D1Q96MS3 346 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 ZSCAN10Q96SZ4 725 aaPredicted RBP12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 CPVLQ9H3G5 476 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 KAT14Q9H8E8 782 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 PDGFCQ9NRA1 345 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 ZSWIM5Q9P217 1185 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 PLXNA1Q9UIW2 1896 aa12.48□□□□□ -0.41
TGFBR3-205ENST00000468996 FRMPD3Q5JV73 1810 aa12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 MOXD2PA6NHM9 499 aa12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 NFIBO00712 420 aa12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 DYNC1LI2O43237 492 aaPredicted RBP12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 DHX16O60231 1041 aaKnown RBP12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 RAG1P15918 1043 aa12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 GJA9P57773 515 aa12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 SHHQ15465 462 aa12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 USH1GQ495M9 461 aa12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 CCSAPQ6IQ19 270 aaPredicted RBP12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 KIAA1211Q6ZU35 1233 aa12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 Q7L0L9 218 aa12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 PNMA1Q8ND90 353 aa12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 KRT23Q9C075 422 aa12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 KATNBL1Q9H079 304 aa12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 AP5M1Q9H0R1 490 aa12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 VAT1LQ9HCJ6 419 aa12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 ADD3Q9UEY8 706 aaKnown RBP12.47□□□□□ -0.41
TGFBR3-205ENST00000468996 ASTN1O14525 1302 aa12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 SNHG28P0DPA3 235 aa12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 GSPT1P15170 499 aaKnown RBP12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 SMPD1P17405 629 aa12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 PTGS1P23219 599 aa12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 ITGB8P26012 769 aa12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 FAAP100Q0VG06 881 aa12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 TMEM63BQ5T3F8 832 aa12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 GPATCH4Q5T3I0 446 aaKnown RBP12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 IQSEC1Q6DN90 963 aa12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 RNF207Q6ZRF8 634 aa12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 FBXO16Q8IX29 292 aaPredicted RBP12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 RUFY2Q8WXA3 655 aa12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 CLEC4DQ8WXI8 215 aa12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 UBAC1Q9BSL1 405 aa12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 IL25Q9H293 177 aa12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 PNMA2Q9UL42 364 aa12.46□□□□□ -0.41
TGFBR3-205ENST00000468996 ELP1O95163 1332 aa12.45□□□□□ -0.42
TGFBR3-205ENST00000468996 KIAA0355O15063 1070 aa12.45□□□□□ -0.42
TGFBR3-205ENST00000468996 CST5P28325 142 aaPredicted RBP12.45□□□□□ -0.42
TGFBR3-205ENST00000468996 FSCN1Q16658 493 aaKnown RBP12.45□□□□□ -0.42
TGFBR3-205ENST00000468996 C9orf50Q5SZB4 431 aa12.45□□□□□ -0.42
TGFBR3-205ENST00000468996 TAPT1Q6NXT6 567 aa12.45□□□□□ -0.42
TGFBR3-205ENST00000468996 CXCL17Q6UXB2 119 aa12.45□□□□□ -0.42
TGFBR3-205ENST00000468996 ANKRD33Q7Z3H0 272 aa12.45□□□□□ -0.42
TGFBR3-205ENST00000468996 TLK2Q86UE8 772 aa12.45□□□□□ -0.42
TGFBR3-205ENST00000468996 ENAHQ8N8S7 591 aaPredicted RBP12.45□□□□□ -0.42
TGFBR3-205ENST00000468996 ANKS1AQ92625 1134 aa12.45□□□□□ -0.42
TGFBR3-205ENST00000468996 TOX2Q96NM4 488 aa12.45□□□□□ -0.42
TGFBR3-205ENST00000468996 UPF3AQ9H1J1 476 aaKnown RBP12.45□□□□□ -0.42
TGFBR3-205ENST00000468996 CNNM2Q9H8M5 875 aa12.45□□□□□ -0.42
TGFBR3-205ENST00000468996 LAMA3Q16787 3333 aa12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 TNKSO95271 1327 aa12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 ARVCFO00192 962 aa12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 CTAGE5O15320 804 aa12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 ZEB2O60315 1214 aa12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 PARP1P09874 1014 aaKnown RBP12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 CHMLP26374 656 aa12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 NT5C2P49902 561 aa12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 ALDH5A1P51649 535 aaPredicted RBP12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 RPS6P62753 249 aaKnown RBP12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 PTH1RQ03431 593 aa12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 PDE4DQ08499 809 aa12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 TRDNQ13061 729 aa12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 IFIT1BQ5T764 474 aaKnown RBP12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 GPR153Q6NV75 609 aa12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 SLC30A10Q6XR72 485 aa12.44□□□□□ -0.42
TGFBR3-205ENST00000468996 ADGRF4Q8IZF3 695 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms