RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ARID1BQ8NFD5 2236 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-207ENST00000468925 NRXN1Q9ULB1 1477 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 ERICH2A1L162 156 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 IKBKBO14920 756 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 STX10O60499 249 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 RGS9O75916 674 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-207ENST00000468925 SELPP16109 830 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 FERP16591 822 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 YY1P25490 414 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 TARSP26639 723 aaKnown RBP5.47□□□□□ -1.53
SF3B1-207ENST00000468925 PEX19P40855 299 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 AFF1P51825 1210 aaKnown RBP5.47□□□□□ -1.53
SF3B1-207ENST00000468925 CLNS1AP54105 237 aaKnown RBP5.47□□□□□ -1.53
SF3B1-207ENST00000468925 HDLBPQ00341 1268 aaKnown RBP5.47□□□□□ -1.53
SF3B1-207ENST00000468925 DYNC1I2Q13409 638 aaKnown RBP5.47□□□□□ -1.53
SF3B1-207ENST00000468925 HIF1AQ16665 826 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 CCDC144BQ3MJ40 725 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 CCDC144CPQ8IYA2 1237 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 C1orf131Q8NDD1 294 aaKnown RBP5.47□□□□□ -1.53
SF3B1-207ENST00000468925 CCDC148Q8NFR7 591 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 RUFY2Q8WXA3 655 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 PIK3R5Q8WYR1 880 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 PPP1R14BQ96C90 147 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 NACC1Q96RE7 527 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 TSPAN18Q96SJ8 248 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 LRRCC1Q9C099 1032 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 TANGO6Q9C0B7 1094 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 UBA5Q9GZZ9 404 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 IQCGQ9H095 443 aaKnown RBP5.47□□□□□ -1.53
SF3B1-207ENST00000468925 PDE11AQ9HCR9 933 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 ZCCHC17Q9NP64 241 aaKnown RBP5.47□□□□□ -1.53
SF3B1-207ENST00000468925 PRDM6Q9NQX0 595 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 NRBP1Q9UHY1 535 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 USP21Q9UK80 565 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 AKAP2Q9Y2D5 859 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 GPATCH8Q9UKJ3 1502 aaKnown RBP5.47□□□□□ -1.53
SF3B1-207ENST00000468925 EVC2Q86UK5 1308 aa5.47□□□□□ -1.53
SF3B1-207ENST00000468925 MAST1Q9Y2H9 1570 aa5.46□□□□□ -1.53
SF3B1-207ENST00000468925 CEP152O94986 1710 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 IQGAP3Q86VI3 1631 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 MYO3AQ8NEV4 1616 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 MADDQ8WXG6 1647 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 TLDC2A0PJX2 215 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 ENO4A6NNW6 628 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 EIF3HO15372 352 aaKnown RBP eCLIP5.46□□□□□ -1.549e-9■□□□□ 9.3
SF3B1-207ENST00000468925 DYRK3O43781 588 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 RTN3O95197 1032 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-207ENST00000468925 EPB41P11171 864 aaKnown RBP5.46□□□□□ -1.54
SF3B1-207ENST00000468925 ATP5JP18859 108 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 SCP2P22307 547 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 IGFBP4P22692 258 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 PSMA5P28066 241 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 GBP2P32456 591 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-207ENST00000468925 GCLCP48506 637 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-207ENST00000468925 RAC1P63000 192 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 GNAI1P63096 354 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 LRP8Q14114 963 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 MBTPS1Q14703 1052 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 CASP8Q14790 479 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 EMC10Q5UCC4 262 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 EGFLAMQ63HQ2 1017 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 NAIF1Q69YI7 327 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-207ENST00000468925 TRIM65Q6PJ69 517 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 CCDC73Q6ZRK6 1079 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 STAG2Q8N3U4 1231 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 BICD1Q96G01 975 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 CCDC34Q96HJ3 373 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 MMTAG2Q9BU76 263 aaKnown RBP5.46□□□□□ -1.54
SF3B1-207ENST00000468925 CAPS2Q9BXY5 557 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 UPF3BQ9BZI7 483 aaKnown RBP5.46□□□□□ -1.54
SF3B1-207ENST00000468925 VCPKMTQ9H867 229 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 FAM204AQ9H8W3 233 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 QTRT2Q9H974 415 aaKnown RBP5.46□□□□□ -1.54
SF3B1-207ENST00000468925 METTL14Q9HCE5 456 aaKnown RBP5.46□□□□□ -1.54
SF3B1-207ENST00000468925 TRMT1Q9NXH9 659 aaKnown RBP5.46□□□□□ -1.54
SF3B1-207ENST00000468925 DACT1Q9NYF0 836 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 RGL1Q9NZL6 768 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 ZFATQ9P243 1243 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 STK26Q9P289 416 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 DMGDHQ9UI17 866 aaKnown RBP5.46□□□□□ -1.54
SF3B1-207ENST00000468925 CDC23Q9UJX2 597 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 CORO1CQ9ULV4 474 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-207ENST00000468925 MTMR6Q9Y217 621 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 FAN1Q9Y2M0 1017 aa5.46□□□□□ -1.54
SF3B1-207ENST00000468925 CHD2O14647 1828 aaKnown RBP5.46□□□□□ -1.54
SF3B1-207ENST00000468925 TARBP1Q13395 1621 aaKnown RBP5.45□□□□□ -1.54
SF3B1-207ENST00000468925 ABCA6Q8N139 1617 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 TOPBP1Q92547 1522 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 CTAGE15A4D2H0 777 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 FAM196BA6NMK8 535 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 USP27XA6NNY8 438 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 H3BQF6 201 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 NPHP1O15259 732 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 KIF5CO60282 957 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 RASSF9O75901 435 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 CTAGE8P0CG41 777 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 RARAP10276 462 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 EPB42P16452 691 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 ABCD1P33897 745 aa5.45□□□□□ -1.54
SF3B1-207ENST00000468925 TMPOP42166 694 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms