RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 GJB1P08034 283 aa30.23■■■□□ 2.43
PDCD4-205ENST00000467574 CASTP20810 708 aaKnown RBP30.23■■■□□ 2.43
PDCD4-205ENST00000467574 RGS19P49795 217 aa30.23■■■□□ 2.43
PDCD4-205ENST00000467574 MFSD14CQ5VZR4 134 aa30.23■■■□□ 2.43
PDCD4-205ENST00000467574 RAB11FIP4Q86YS3 637 aa30.23■■■□□ 2.43
PDCD4-205ENST00000467574 SHISA4Q96DD7 197 aa30.23■■■□□ 2.43
PDCD4-205ENST00000467574 DDX11Q96FC9 970 aa30.23■■■□□ 2.43
PDCD4-205ENST00000467574 VAT1LQ9HCJ6 419 aa30.23■■■□□ 2.43
PDCD4-205ENST00000467574 DHX16O60231 1041 aaKnown RBP30.22■■■□□ 2.43
PDCD4-205ENST00000467574 PSMA5P28066 241 aa30.22■■■□□ 2.43
PDCD4-205ENST00000467574 FBXL16Q8N461 479 aa30.22■■■□□ 2.43
PDCD4-205ENST00000467574 FAM133AQ8N9E0 248 aa30.22■■■□□ 2.43
PDCD4-205ENST00000467574 CTCFLQ8NI51 663 aaPredicted RBP30.22■■■□□ 2.43
PDCD4-205ENST00000467574 AGXT2Q9BYV1 514 aa30.22■■■□□ 2.43
PDCD4-205ENST00000467574 CYP39A1Q9NYL5 469 aa30.22■■■□□ 2.43
PDCD4-205ENST00000467574 PFASO15067 1338 aa30.22■■■□□ 2.43
PDCD4-205ENST00000467574 PPP1R11O60927 126 aaPredicted RBP30.21■■■□□ 2.43
PDCD4-205ENST00000467574 CALM1P0DP23 149 aa30.21■■■□□ 2.43
PDCD4-205ENST00000467574 CALM2P0DP24 149 aa30.21■■■□□ 2.43
PDCD4-205ENST00000467574 CALM3P0DP25 149 aa30.21■■■□□ 2.43
PDCD4-205ENST00000467574 CYBAP13498 195 aa30.21■■■□□ 2.43
PDCD4-205ENST00000467574 EN2P19622 333 aaPredicted RBP30.21■■■□□ 2.43
PDCD4-205ENST00000467574 KIF5BP33176 963 aa30.21■■■□□ 2.43
PDCD4-205ENST00000467574 USH1GQ495M9 461 aa30.21■■■□□ 2.43
PDCD4-205ENST00000467574 MICU3Q86XE3 530 aa30.21■■■□□ 2.43
PDCD4-205ENST00000467574 TRPV1Q8NER1 839 aa30.21■■■□□ 2.43
PDCD4-205ENST00000467574 ZSWIM6Q9HCJ5 1215 aa30.21■■■□□ 2.43
PDCD4-205ENST00000467574 HMX1Q9NP08 348 aaPredicted RBP30.21■■■□□ 2.43
PDCD4-205ENST00000467574 PLEKHA8P1O95397 391 aa30.2■■■□□ 2.43
PDCD4-205ENST00000467574 CCND3P30281 292 aaPredicted RBP30.2■■■□□ 2.43
PDCD4-205ENST00000467574 GJA8P48165 433 aa30.2■■■□□ 2.43
PDCD4-205ENST00000467574 CNTN2Q02246 1040 aa30.2■■■□□ 2.43
PDCD4-205ENST00000467574 Q6ZUG5 572 aa30.2■■■□□ 2.43
PDCD4-205ENST00000467574 SPZ1Q9BXG8 430 aa30.2■■■□□ 2.43
PDCD4-205ENST00000467574 TM6SF1Q9BZW5 370 aa30.2■■■□□ 2.43
PDCD4-205ENST00000467574 ASTN1O14525 1302 aa30.2■■■□□ 2.42
PDCD4-205ENST00000467574 ZBTB5O15062 677 aa30.19■■■□□ 2.42
PDCD4-205ENST00000467574 ZNF467Q7Z7K2 595 aaPredicted RBP30.19■■■□□ 2.42
PDCD4-205ENST00000467574 CCDC144CPQ8IYA2 1237 aa30.19■■■□□ 2.42
PDCD4-205ENST00000467574 U2AF1L4Q8WU68 220 aaKnown RBP30.19■■■□□ 2.42
PDCD4-205ENST00000467574 PIGSQ96S52 555 aa30.19■■■□□ 2.42
PDCD4-205ENST00000467574 TINF2Q9BSI4 451 aa30.19■■■□□ 2.42
PDCD4-205ENST00000467574 ABCB11O95342 1321 aa30.19■■■□□ 2.42
PDCD4-205ENST00000467574 MAMDC4Q6UXC1 1216 aa30.18■■■□□ 2.42
PDCD4-205ENST00000467574 NSMFQ6X4W1 530 aa30.18■■■□□ 2.42
PDCD4-205ENST00000467574 RUFY3Q7L099 469 aa30.18■■■□□ 2.42
PDCD4-205ENST00000467574 FBXO11Q86XK2 927 aa30.18■■■□□ 2.42
PDCD4-205ENST00000467574 SRBD1Q8N5C6 995 aaKnown RBP30.18■■■□□ 2.42
PDCD4-205ENST00000467574 FANCBQ8NB91 859 aa30.18■■■□□ 2.42
PDCD4-205ENST00000467574 IL17RAQ96F46 866 aa30.18■■■□□ 2.42
PDCD4-205ENST00000467574 DEFB118Q96PH6 123 aa30.18■■■□□ 2.42
PDCD4-205ENST00000467574 KLF18A0A0U1RQI7 1052 aa30.17■■■□□ 2.42
PDCD4-205ENST00000467574 SOWAHBA6NEL2 793 aa30.17■■■□□ 2.42
PDCD4-205ENST00000467574 POTEB2H3BUK9 544 aa30.17■■■□□ 2.42
PDCD4-205ENST00000467574 SMARCA1P28370 1054 aa30.17■■■□□ 2.42
PDCD4-205ENST00000467574 SLC30A10Q6XR72 485 aa30.17■■■□□ 2.42
PDCD4-205ENST00000467574 TMTC3Q6ZXV5 915 aa30.17■■■□□ 2.42
PDCD4-205ENST00000467574 HOMER1Q86YM7 354 aa30.17■■■□□ 2.42
PDCD4-205ENST00000467574 MSL3Q8N5Y2 521 aaKnown RBP30.17■■■□□ 2.42
PDCD4-205ENST00000467574 CRISPLD2Q9H0B8 497 aa30.17■■■□□ 2.42
PDCD4-205ENST00000467574 SYNGAP1Q96PV0 1343 aa30.17■■■□□ 2.42
PDCD4-205ENST00000467574 SGPL1O95470 568 aa30.16■■■□□ 2.42
PDCD4-205ENST00000467574 GNAQP50148 359 aa30.16■■■□□ 2.42
PDCD4-205ENST00000467574 BAATQ14032 418 aaPredicted RBP30.16■■■□□ 2.42
PDCD4-205ENST00000467574 BRF1Q92994 677 aa30.16■■■□□ 2.42
PDCD4-205ENST00000467574 PURBQ96QR8 312 aaKnown RBP30.16■■■□□ 2.42
PDCD4-205ENST00000467574 LZTS2Q9BRK4 669 aa30.16■■■□□ 2.42
PDCD4-205ENST00000467574 AMNQ9BXJ7 453 aa30.16■■■□□ 2.42
PDCD4-205ENST00000467574 GTF3C3Q9Y5Q9 886 aa30.16■■■□□ 2.42
PDCD4-205ENST00000467574 NID2Q14112 1375 aa30.15■■■□□ 2.42
PDCD4-205ENST00000467574 OPLAHO14841 1288 aa30.15■■■□□ 2.42
PDCD4-205ENST00000467574 ZBTB43O43298 467 aa30.15■■■□□ 2.42
PDCD4-205ENST00000467574 EIF5BO60841 1220 aaKnown RBP30.15■■■□□ 2.42
PDCD4-205ENST00000467574 RCAN1P53805 252 aa30.15■■■□□ 2.42
PDCD4-205ENST00000467574 ANAPC15P60006 121 aa30.15■■■□□ 2.42
PDCD4-205ENST00000467574 APOBRQ0VD83 1088 aa30.15■■■□□ 2.42
PDCD4-205ENST00000467574 CMTR1Q8N1G2 835 aaKnown RBP30.15■■■□□ 2.42
PDCD4-205ENST00000467574 UPF3BQ9BZI7 483 aaKnown RBP30.15■■■□□ 2.42
PDCD4-205ENST00000467574 SNAI1O95863 264 aaPredicted RBP30.14■■■□□ 2.42
PDCD4-205ENST00000467574 FGD1P98174 961 aa30.14■■■□□ 2.42
PDCD4-205ENST00000467574 PRAMEF19Q5SWL8 479 aa30.14■■■□□ 2.42
PDCD4-205ENST00000467574 SYNE3Q6ZMZ3 975 aa30.14■■■□□ 2.42
PDCD4-205ENST00000467574 RGS22Q8NE09 1264 aa30.14■■■□□ 2.42
PDCD4-205ENST00000467574 FAM217BQ9NTX9 383 aaPredicted RBP30.14■■■□□ 2.42
PDCD4-205ENST00000467574 NRBP1Q9UHY1 535 aa30.14■■■□□ 2.42
PDCD4-205ENST00000467574 CYP46A1Q9Y6A2 500 aa30.14■■■□□ 2.42
PDCD4-205ENST00000467574 PNMA6FA0A0J9YX94 578 aa30.13■■■□□ 2.41
PDCD4-205ENST00000467574 RPS6P62753 249 aaKnown RBP30.13■■■□□ 2.41
PDCD4-205ENST00000467574 TOB2Q14106 344 aaPredicted RBP30.13■■■□□ 2.41
PDCD4-205ENST00000467574 LHX8Q68G74 356 aa30.13■■■□□ 2.41
PDCD4-205ENST00000467574 RNF207Q6ZRF8 634 aa30.13■■■□□ 2.41
PDCD4-205ENST00000467574 PTPDC1A2A3K4 754 aa30.12■■■□□ 2.41
PDCD4-205ENST00000467574 EVCP57679 992 aa30.12■■■□□ 2.41
PDCD4-205ENST00000467574 FUT2Q10981 343 aa30.12■■■□□ 2.41
PDCD4-205ENST00000467574 RTN1Q16799 776 aa30.12■■■□□ 2.41
PDCD4-205ENST00000467574 ARMCX2Q7L311 632 aa30.12■■■□□ 2.41
PDCD4-205ENST00000467574 TBC1D5Q92609 795 aa30.12■■■□□ 2.41
PDCD4-205ENST00000467574 RBM28Q9NW13 759 aaKnown RBP30.12■■■□□ 2.41
PDCD4-205ENST00000467574 MRPL11Q9Y3B7 192 aaKnown RBP30.12■■■□□ 2.41
PDCD4-205ENST00000467574 PCDHA1Q9Y5I3 950 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms