RNA–Protein interactions for RNA: ENST00000467052.1

COL15A1-202, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-202ENST00000467052 DCP1AQ9NPI6 582 aaPredicted RBP16.52■□□□□ 0.24
COL15A1-202ENST00000467052 TLR7Q9NYK1 1049 aaKnown RBP16.52■□□□□ 0.24
COL15A1-202ENST00000467052 LMCD1Q9NZU5 365 aa16.52■□□□□ 0.24
COL15A1-202ENST00000467052 TET1Q8NFU7 2136 aa16.51■□□□□ 0.23
COL15A1-202ENST00000467052 SUPT20HL2P0C7V6 817 aa16.51■□□□□ 0.23
COL15A1-202ENST00000467052 RFC2P35250 354 aa16.51■□□□□ 0.23
COL15A1-202ENST00000467052 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL15A1-202ENST00000467052 HERC6Q8IVU3 1022 aa16.51■□□□□ 0.23
COL15A1-202ENST00000467052 CPXCR1Q8N123 301 aa16.51■□□□□ 0.23
COL15A1-202ENST00000467052 ANTXR1Q9H6X2 564 aa16.51■□□□□ 0.23
COL15A1-202ENST00000467052 RIPK3Q9Y572 518 aa16.51■□□□□ 0.23
COL15A1-202ENST00000467052 WDFY4Q6ZS81 3184 aa16.51■□□□□ 0.23
COL15A1-202ENST00000467052 ASTN1O14525 1302 aa16.5■□□□□ 0.23
COL15A1-202ENST00000467052 SCN10AQ9Y5Y9 1956 aa16.5■□□□□ 0.23
COL15A1-202ENST00000467052 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.5■□□□□ 0.23
COL15A1-202ENST00000467052 SURF6O75683 361 aaKnown RBP16.5■□□□□ 0.23
COL15A1-202ENST00000467052 TTF1Q15361 905 aaPredicted RBP16.5■□□□□ 0.23
COL15A1-202ENST00000467052 GDPD5Q8WTR4 605 aa16.5■□□□□ 0.23
COL15A1-202ENST00000467052 FGD4Q96M96 766 aa16.5■□□□□ 0.23
COL15A1-202ENST00000467052 BACH2Q9BYV9 841 aa16.5■□□□□ 0.23
COL15A1-202ENST00000467052 KATNBL1Q9H079 304 aa16.5■□□□□ 0.23
COL15A1-202ENST00000467052 CCDC8Q9H0W5 538 aaPredicted RBP16.5■□□□□ 0.23
COL15A1-202ENST00000467052 ALDH8A1Q9H2A2 487 aaPredicted RBP16.5■□□□□ 0.23
COL15A1-202ENST00000467052 LCTP09848 1927 aa16.5■□□□□ 0.23
COL15A1-202ENST00000467052 GRIN2DO15399 1336 aa16.49■□□□□ 0.23
COL15A1-202ENST00000467052 ATP2A1O14983 1001 aa16.49■□□□□ 0.23
COL15A1-202ENST00000467052 DCXO43602 365 aa16.49■□□□□ 0.23
COL15A1-202ENST00000467052 LPXNO60711 386 aa16.49■□□□□ 0.23
COL15A1-202ENST00000467052 ZBED4O75132 1171 aa16.49■□□□□ 0.23
COL15A1-202ENST00000467052 PDE4AP27815 886 aa16.49■□□□□ 0.23
COL15A1-202ENST00000467052 KCNJ6P48051 423 aa16.49■□□□□ 0.23
COL15A1-202ENST00000467052 PSMC6P62333 389 aa16.49■□□□□ 0.23
COL15A1-202ENST00000467052 LEXMQ3ZCV2 418 aa16.49■□□□□ 0.23
COL15A1-202ENST00000467052 PRPF38AQ8NAV1 312 aaKnown RBP16.49■□□□□ 0.23
COL15A1-202ENST00000467052 CHST13Q8NET6 341 aa16.49■□□□□ 0.23
COL15A1-202ENST00000467052 VWCEQ96DN2 955 aa16.49■□□□□ 0.23
COL15A1-202ENST00000467052 GNEQ9Y223 722 aaKnown RBP16.49■□□□□ 0.23
COL15A1-202ENST00000467052 TNKSO95271 1327 aa16.48■□□□□ 0.23
COL15A1-202ENST00000467052 BAIAP3O94812 1187 aa16.48■□□□□ 0.23
COL15A1-202ENST00000467052 ARHGEF15O94989 841 aa16.48■□□□□ 0.23
COL15A1-202ENST00000467052 PDE6AP16499 860 aa16.48■□□□□ 0.23
COL15A1-202ENST00000467052 KCNA5P22460 613 aa16.48■□□□□ 0.23
COL15A1-202ENST00000467052 CDK8P49336 464 aa16.48■□□□□ 0.23
COL15A1-202ENST00000467052 POLA2Q14181 598 aa16.48■□□□□ 0.23
COL15A1-202ENST00000467052 SLC9C2Q5TAH2 1124 aa16.48■□□□□ 0.23
COL15A1-202ENST00000467052 LCORLQ8N3X6 602 aa16.48■□□□□ 0.23
COL15A1-202ENST00000467052 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
COL15A1-202ENST00000467052 FTOQ9C0B1 505 aaKnown RBP eCLIP16.48■□□□□ 0.23
COL15A1-202ENST00000467052 ASB14A6NK59 587 aa16.47■□□□□ 0.23
COL15A1-202ENST00000467052 DYNC1LI2O43237 492 aaPredicted RBP16.47■□□□□ 0.23
COL15A1-202ENST00000467052 CYP2C9P11712 490 aa16.47■□□□□ 0.23
COL15A1-202ENST00000467052 IL9P15248 144 aa16.47■□□□□ 0.23
COL15A1-202ENST00000467052 NUCB1Q02818 461 aa16.47■□□□□ 0.23
COL15A1-202ENST00000467052 PTCRAQ6ISU1 281 aaPredicted RBP16.47■□□□□ 0.23
COL15A1-202ENST00000467052 C16orf86Q6ZW13 317 aa16.47■□□□□ 0.23
COL15A1-202ENST00000467052 NUP88Q99567 741 aaPredicted RBP16.47■□□□□ 0.23
COL15A1-202ENST00000467052 RAVER2Q9HCJ3 691 aaKnown RBP16.47■□□□□ 0.23
COL15A1-202ENST00000467052 ATP8A2Q9NTI2 1148 aa16.47■□□□□ 0.23
COL15A1-202ENST00000467052 TRMT13Q9NUP7 481 aaKnown RBP16.47■□□□□ 0.23
COL15A1-202ENST00000467052 NLRC5Q86WI3 1866 aa16.47■□□□□ 0.23
COL15A1-202ENST00000467052 ZNF532Q9HCE3 1301 aa16.46■□□□□ 0.23
COL15A1-202ENST00000467052 OAZ1P54368 228 aa16.46■□□□□ 0.23
COL15A1-202ENST00000467052 PUS10Q3MIT2 529 aaKnown RBP16.46■□□□□ 0.23
COL15A1-202ENST00000467052 SIRT2Q8IXJ6 389 aa16.46■□□□□ 0.23
COL15A1-202ENST00000467052 RETREG2Q8NC44 543 aa16.46■□□□□ 0.23
COL15A1-202ENST00000467052 SSH3Q8TE77 659 aa16.46■□□□□ 0.23
COL15A1-202ENST00000467052 EAF2Q96CJ1 260 aaPredicted RBP16.46■□□□□ 0.23
COL15A1-202ENST00000467052 HOMER2Q9NSB8 354 aa16.46■□□□□ 0.23
COL15A1-202ENST00000467052 POLR3EQ9NVU0 708 aa16.46■□□□□ 0.23
COL15A1-202ENST00000467052 Q9Y3F1 56 aa16.46■□□□□ 0.23
COL15A1-202ENST00000467052 PITPNM1O00562 1244 aa16.45■□□□□ 0.22
COL15A1-202ENST00000467052 HMMRO75330 724 aa16.45■□□□□ 0.22
COL15A1-202ENST00000467052 KIFC2Q96AC6 838 aa16.45■□□□□ 0.22
COL15A1-202ENST00000467052 ZBED2Q9BTP6 218 aa16.45■□□□□ 0.22
COL15A1-202ENST00000467052 DCTPP1Q9H773 170 aa16.45■□□□□ 0.22
COL15A1-202ENST00000467052 ACAD9Q9H845 621 aa16.45■□□□□ 0.22
COL15A1-202ENST00000467052 ARMT1Q9H993 441 aa16.45■□□□□ 0.22
COL15A1-202ENST00000467052 FAM50BQ9Y247 325 aa16.45■□□□□ 0.22
COL15A1-202ENST00000467052 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.44■□□□□ 0.22
COL15A1-202ENST00000467052 SMPD1P17405 629 aa16.44■□□□□ 0.22
COL15A1-202ENST00000467052 CNTN2Q02246 1040 aa16.44■□□□□ 0.22
COL15A1-202ENST00000467052 FAM47CQ5HY64 1035 aa16.44■□□□□ 0.22
COL15A1-202ENST00000467052 C12orf60Q5U649 245 aa16.44■□□□□ 0.22
COL15A1-202ENST00000467052 CEP85Q6P2H3 762 aa16.44■□□□□ 0.22
COL15A1-202ENST00000467052 SPRED2Q7Z698 418 aa16.44■□□□□ 0.22
COL15A1-202ENST00000467052 FAM133AQ8N9E0 248 aa16.44■□□□□ 0.22
COL15A1-202ENST00000467052 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.44■□□□□ 0.22
COL15A1-202ENST00000467052 SLC38A10Q9HBR0 1119 aa16.44■□□□□ 0.22
COL15A1-202ENST00000467052 MTUS1Q9ULD2 1270 aa16.44■□□□□ 0.22
COL15A1-202ENST00000467052 ST18O60284 1047 aa16.43■□□□□ 0.22
COL15A1-202ENST00000467052 NDUFB10O96000 172 aa16.43■□□□□ 0.22
COL15A1-202ENST00000467052 BFSP2Q13515 415 aa16.43■□□□□ 0.22
COL15A1-202ENST00000467052 IQSEC1Q6DN90 963 aa16.43■□□□□ 0.22
COL15A1-202ENST00000467052 AACSQ86V21 672 aa16.43■□□□□ 0.22
COL15A1-202ENST00000467052 CHD1LQ86WJ1 897 aa16.43■□□□□ 0.22
COL15A1-202ENST00000467052 FBXO16Q8IX29 292 aaPredicted RBP16.43■□□□□ 0.22
COL15A1-202ENST00000467052 MFSD14AQ96MC6 490 aa16.43■□□□□ 0.22
COL15A1-202ENST00000467052 RALGAPA2Q2PPJ7 1873 aa16.43■□□□□ 0.22
COL15A1-202ENST00000467052 MICAL3Q7RTP6 2002 aa16.42■□□□□ 0.22
COL15A1-202ENST00000467052 CYP2D7A0A087X1C5 515 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms