RNA–Protein interactions for RNA: ENST00000466272.1

SMTN-214, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-214ENST00000466272 RAET1EQ8TD07 263 aa12.75□□□□□ -0.37
SMTN-214ENST00000466272 CLEC4DQ8WXI8 215 aa12.75□□□□□ -0.37
SMTN-214ENST00000466272 APBA2Q99767 749 aa12.75□□□□□ -0.37
SMTN-214ENST00000466272 NUDT12Q9BQG2 462 aa12.75□□□□□ -0.37
SMTN-214ENST00000466272 SPZ1Q9BXG8 430 aa12.75□□□□□ -0.37
SMTN-214ENST00000466272 ACAD9Q9H845 621 aa12.75□□□□□ -0.37
SMTN-214ENST00000466272 UPF2Q9HAU5 1272 aaKnown RBP12.75□□□□□ -0.37
SMTN-214ENST00000466272 A1CFQ9NQ94 594 aaKnown RBP12.75□□□□□ -0.37
SMTN-214ENST00000466272 FRMPD3Q5JV73 1810 aa12.74□□□□□ -0.37
SMTN-214ENST00000466272 ZBTB5O15062 677 aa12.74□□□□□ -0.37
SMTN-214ENST00000466272 HOXD10P28358 340 aa12.74□□□□□ -0.37
SMTN-214ENST00000466272 COPB2P35606 906 aa12.74□□□□□ -0.37
SMTN-214ENST00000466272 RCAN1P53805 252 aa12.74□□□□□ -0.37
SMTN-214ENST00000466272 EVCP57679 992 aa12.74□□□□□ -0.37
SMTN-214ENST00000466272 TRIM32Q13049 653 aa12.74□□□□□ -0.37
SMTN-214ENST00000466272 NSMFQ6X4W1 530 aa12.74□□□□□ -0.37
SMTN-214ENST00000466272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMTN-214ENST00000466272 FBXO11Q86XK2 927 aa12.74□□□□□ -0.37
SMTN-214ENST00000466272 CHST13Q8NET6 341 aa12.74□□□□□ -0.37
SMTN-214ENST00000466272 TRIB2Q92519 343 aa12.74□□□□□ -0.37
SMTN-214ENST00000466272 PURBQ96QR8 312 aaKnown RBP12.74□□□□□ -0.37
SMTN-214ENST00000466272 RBM28Q9NW13 759 aaKnown RBP12.74□□□□□ -0.37
SMTN-214ENST00000466272 FLRT1Q9NZU1 646 aa12.74□□□□□ -0.37
SMTN-214ENST00000466272 TPCN1Q9ULQ1 816 aa12.74□□□□□ -0.37
SMTN-214ENST00000466272 DDX49Q9Y6V7 483 aaKnown RBP12.74□□□□□ -0.37
SMTN-214ENST00000466272 ASTN1O14525 1302 aa12.73□□□□□ -0.37
SMTN-214ENST00000466272 OPLAHO14841 1288 aa12.73□□□□□ -0.37
SMTN-214ENST00000466272 ADCY3O60266 1144 aa12.73□□□□□ -0.37
SMTN-214ENST00000466272 MYCP01106 439 aaPredicted RBP12.73□□□□□ -0.37
SMTN-214ENST00000466272 FCER1AP12319 257 aa12.73□□□□□ -0.37
SMTN-214ENST00000466272 RGS2P41220 211 aa12.73□□□□□ -0.37
SMTN-214ENST00000466272 GNAQP50148 359 aa12.73□□□□□ -0.37
SMTN-214ENST00000466272 ST3GAL1Q11201 340 aa12.73□□□□□ -0.37
SMTN-214ENST00000466272 IRF5Q13568 498 aa12.73□□□□□ -0.37
SMTN-214ENST00000466272 KCTD2Q14681 263 aa12.73□□□□□ -0.37
SMTN-214ENST00000466272 TKFCQ3LXA3 575 aa12.73□□□□□ -0.37
SMTN-214ENST00000466272 TNS4Q8IZW8 715 aa12.73□□□□□ -0.37
SMTN-214ENST00000466272 GPKOWQ92917 476 aaPredicted RBP eCLIP12.73□□□□□ -0.37
SMTN-214ENST00000466272 PHKBQ93100 1093 aa12.73□□□□□ -0.37
SMTN-214ENST00000466272 FGD4Q96M96 766 aa12.73□□□□□ -0.37
SMTN-214ENST00000466272 ALDH8A1Q9H2A2 487 aaPredicted RBP12.73□□□□□ -0.37
SMTN-214ENST00000466272 ABCB11O95342 1321 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 PNMA6FA0A0J9YX94 578 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 CD2BP2O95400 341 aaKnown RBP12.72□□□□□ -0.37
SMTN-214ENST00000466272 INHAP05111 366 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 GRK4P32298 578 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 PRMT2P55345 433 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 CNTN2Q02246 1040 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 SCRN1Q12765 414 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 NTRK3Q16288 839 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 PKN2Q16513 984 aaKnown RBP12.72□□□□□ -0.37
SMTN-214ENST00000466272 SLC9C1Q4G0N8 1177 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 ANKRD35Q8N283 1001 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 NECAB1Q8N987 351 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 TBC1D5Q92609 795 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 RRP36Q96EU6 259 aaKnown RBP12.72□□□□□ -0.37
SMTN-214ENST00000466272 LZTS2Q9BRK4 669 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 AMNQ9BXJ7 453 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 FBXO40Q9UH90 709 aa12.72□□□□□ -0.37
SMTN-214ENST00000466272 DNAJC25-GNG10A0A024R161 153 aa12.71□□□□□ -0.37
SMTN-214ENST00000466272 PTPDC1A2A3K4 754 aa12.71□□□□□ -0.37
SMTN-214ENST00000466272 HOXC6P09630 235 aa12.71□□□□□ -0.37
SMTN-214ENST00000466272 RABEP1Q15276 862 aa12.71□□□□□ -0.37
SMTN-214ENST00000466272 ME3Q16798 604 aa12.71□□□□□ -0.37
SMTN-214ENST00000466272 ZNF792Q3KQV3 632 aa12.71□□□□□ -0.37
SMTN-214ENST00000466272 WWC2Q6AWC2 1192 aa12.71□□□□□ -0.37
SMTN-214ENST00000466272 DPP9Q86TI2 863 aa12.71□□□□□ -0.37
SMTN-214ENST00000466272 ABRAQ8N0Z2 381 aa12.71□□□□□ -0.37
SMTN-214ENST00000466272 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
SMTN-214ENST00000466272 ZNF274Q96GC6 653 aaPredicted RBP12.71□□□□□ -0.37
SMTN-214ENST00000466272 ABHD8Q96I13 439 aa12.71□□□□□ -0.37
SMTN-214ENST00000466272 MAML3Q96JK9 1138 aa12.71□□□□□ -0.37
SMTN-214ENST00000466272 CYP39A1Q9NYL5 469 aa12.71□□□□□ -0.37
SMTN-214ENST00000466272 SEC63Q9UGP8 760 aaKnown RBP12.71□□□□□ -0.37
SMTN-214ENST00000466272 PCDHA1Q9Y5I3 950 aa12.71□□□□□ -0.37
SMTN-214ENST00000466272 SOWAHBA6NEL2 793 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 STRNO43815 780 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 PFKFB2O60825 505 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 HMGCRP04035 888 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 CALML3P27482 149 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 BAATQ14032 418 aaPredicted RBP12.7□□□□□ -0.38
SMTN-214ENST00000466272 MTFR1Q15390 333 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 TYW1BQ6NUM6 668 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 HEATR3Q7Z4Q2 680 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 FAM133AQ8N9E0 248 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 ARMC5Q96C12 935 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 SHISA4Q96DD7 197 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 DDX11Q96FC9 970 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 ZNF333Q96JL9 665 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 SLC26A6Q9BXS9 759 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 COL20A1Q9P218 1284 aa12.7□□□□□ -0.38
SMTN-214ENST00000466272 PFASO15067 1338 aa12.69□□□□□ -0.38
SMTN-214ENST00000466272 POTEB2H3BUK9 544 aa12.69□□□□□ -0.38
SMTN-214ENST00000466272 XRCC5P13010 732 aaKnown RBP12.69□□□□□ -0.38
SMTN-214ENST00000466272 PRKAR2AP13861 404 aaKnown RBP12.69□□□□□ -0.38
SMTN-214ENST00000466272 SMARCA1P28370 1054 aa12.69□□□□□ -0.38
SMTN-214ENST00000466272 HOXA13P31271 388 aaPredicted RBP12.69□□□□□ -0.38
SMTN-214ENST00000466272 CYP2C19P33261 490 aa12.69□□□□□ -0.38
SMTN-214ENST00000466272 RPS6P62753 249 aaKnown RBP12.69□□□□□ -0.38
SMTN-214ENST00000466272 ANKRD1Q15327 319 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms