RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 EDIL3O43854 480 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 SMC2O95347 1197 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 CASP1P29466 404 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 PTGER2P43116 358 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 MORC3Q14149 939 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 UBE2SQ16763 222 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 FILIP1Q7Z7B0 1213 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 IQUBQ8NA54 791 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 CCDC34Q96HJ3 373 aa20.69■□□□□ 0.9
COL9A3-205ENST00000466192 XPO4Q9C0E2 1151 aaKnown RBP20.69■□□□□ 0.9
COL9A3-205ENST00000466192 PSDA5PKW4 1024 aaPredicted RBP20.68■□□□□ 0.9
COL9A3-205ENST00000466192 ATP1A3P13637 1013 aa20.68■□□□□ 0.9
COL9A3-205ENST00000466192 CLK2P49760 499 aaKnown RBP20.68■□□□□ 0.9
COL9A3-205ENST00000466192 CDC37Q16543 378 aaPredicted RBP20.68■□□□□ 0.9
COL9A3-205ENST00000466192 PDXDC2PQ6P474 469 aa20.68■□□□□ 0.9
COL9A3-205ENST00000466192 CACTINQ8WUQ7 758 aaKnown RBP20.68■□□□□ 0.9
COL9A3-205ENST00000466192 SMCHD1A6NHR9 2005 aa20.68■□□□□ 0.9
COL9A3-205ENST00000466192 PP2D1A8MPX8 630 aa20.68■□□□□ 0.9
COL9A3-205ENST00000466192 TBC1D12O60347 775 aa20.68■□□□□ 0.9
COL9A3-205ENST00000466192 NEMFO60524 1076 aa20.68■□□□□ 0.9
COL9A3-205ENST00000466192 OR52Z1P0C646 297 aa20.68■□□□□ 0.9
COL9A3-205ENST00000466192 ECE1P42892 770 aa20.68■□□□□ 0.9
COL9A3-205ENST00000466192 PRELPP51888 382 aa20.68■□□□□ 0.9
COL9A3-205ENST00000466192 RASSF7Q02833 373 aa20.68■□□□□ 0.9
COL9A3-205ENST00000466192 MIGA2Q7L4E1 593 aa20.68■□□□□ 0.9
COL9A3-205ENST00000466192 CUL5Q93034 780 aa20.68■□□□□ 0.9
COL9A3-205ENST00000466192 ZBTB21Q9ULJ3 1066 aa20.68■□□□□ 0.9
COL9A3-205ENST00000466192 ATAD5Q96QE3 1844 aa20.67■□□□□ 0.9
COL9A3-205ENST00000466192 EGFRP00533 1210 aa20.67■□□□□ 0.9
COL9A3-205ENST00000466192 DPYDQ12882 1025 aa20.67■□□□□ 0.9
COL9A3-205ENST00000466192 TRIML1Q8N9V2 468 aa20.67■□□□□ 0.9
COL9A3-205ENST00000466192 STAMQ92783 540 aa20.67■□□□□ 0.9
COL9A3-205ENST00000466192 SCAF8Q9UPN6 1271 aaKnown RBP20.67■□□□□ 0.9
COL9A3-205ENST00000466192 R3HCC1Q9Y3T6 440 aaKnown RBP20.67■□□□□ 0.9
COL9A3-205ENST00000466192 BMP3P12645 472 aa20.66■□□□□ 0.9
COL9A3-205ENST00000466192 ZNF280AP59817 542 aaPredicted RBP20.66■□□□□ 0.9
COL9A3-205ENST00000466192 ARID5BQ14865 1188 aa20.66■□□□□ 0.9
COL9A3-205ENST00000466192 KARSQ15046 597 aaKnown RBP20.66■□□□□ 0.9
COL9A3-205ENST00000466192 DNTTIP2Q5QJE6 756 aaKnown RBP20.66■□□□□ 0.9
COL9A3-205ENST00000466192 ACER1Q8TDN7 264 aa20.66■□□□□ 0.9
COL9A3-205ENST00000466192 MTRQ99707 1265 aa20.66■□□□□ 0.9
COL9A3-205ENST00000466192 PYM1Q9BRP8 204 aaKnown RBP20.66■□□□□ 0.9
COL9A3-205ENST00000466192 PSTPIP2Q9H939 334 aa20.66■□□□□ 0.9
COL9A3-205ENST00000466192 SYNPO2Q9UMS6 1093 aa20.66■□□□□ 0.9
COL9A3-205ENST00000466192 LTBP3Q9NS15 1303 aa20.66■□□□□ 0.9
COL9A3-205ENST00000466192 TMEM232C9JQI7 657 aa20.66■□□□□ 0.9
COL9A3-205ENST00000466192 TXLNAP40222 546 aa20.66■□□□□ 0.9
COL9A3-205ENST00000466192 MRPL12P52815 198 aaKnown RBP20.66■□□□□ 0.9
COL9A3-205ENST00000466192 SNAP25P60880 206 aa20.66■□□□□ 0.9
COL9A3-205ENST00000466192 POTEDQ86YR6 584 aa20.66■□□□□ 0.9
COL9A3-205ENST00000466192 SPICE1Q8N0Z3 855 aa20.66■□□□□ 0.9
COL9A3-205ENST00000466192 SPTLC3Q9NUV7 552 aa20.66■□□□□ 0.9
COL9A3-205ENST00000466192 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.66■□□□□ 0.9
COL9A3-205ENST00000466192 PCDHA1Q9Y5I3 950 aa20.66■□□□□ 0.9
COL9A3-205ENST00000466192 TNNI2P48788 182 aa20.65■□□□□ 0.9
COL9A3-205ENST00000466192 FANCCQ00597 558 aa20.65■□□□□ 0.9
COL9A3-205ENST00000466192 ORC2Q13416 577 aaPredicted RBP20.65■□□□□ 0.9
COL9A3-205ENST00000466192 KIAA1755Q5JYT7 1200 aa20.65■□□□□ 0.9
COL9A3-205ENST00000466192 MLKLQ8NB16 471 aa20.65■□□□□ 0.9
COL9A3-205ENST00000466192 ARHGEF10LQ9HCE6 1279 aa20.65■□□□□ 0.9
COL9A3-205ENST00000466192 FANCLQ9NW38 375 aa20.65■□□□□ 0.9
COL9A3-205ENST00000466192 SYDE2Q5VT97 1194 aa20.65■□□□□ 0.9
COL9A3-205ENST00000466192 LRRC8AQ8IWT6 810 aa20.65■□□□□ 0.9
COL9A3-205ENST00000466192 DISC1Q9NRI5 854 aa20.65■□□□□ 0.9
COL9A3-205ENST00000466192 TMX2Q9Y320 296 aa20.65■□□□□ 0.9
COL9A3-205ENST00000466192 TDP2O95551 362 aa20.64■□□□□ 0.89
COL9A3-205ENST00000466192 RPS12P25398 132 aaKnown RBP20.64■□□□□ 0.89
COL9A3-205ENST00000466192 IKQ13123 557 aaPredicted RBP20.64■□□□□ 0.89
COL9A3-205ENST00000466192 BTNL9Q6UXG8 535 aa20.64■□□□□ 0.89
COL9A3-205ENST00000466192 NLGN2Q8NFZ4 835 aa20.64■□□□□ 0.89
COL9A3-205ENST00000466192 CCSER1Q9C0I3 900 aa20.64■□□□□ 0.89
COL9A3-205ENST00000466192 ZMYND15Q9H091 742 aa20.64■□□□□ 0.89
COL9A3-205ENST00000466192 SLC37A4O43826 429 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 UBA7P41226 1012 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 MAP3K10Q02779 954 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 FMR1Q06787 632 aaKnown RBP eCLIP20.63■□□□□ 0.89
COL9A3-205ENST00000466192 NAALADL2Q58DX5 795 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 MTMR9Q96QG7 549 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 DACH1Q9UI36 760 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 USP17L15C9J2P7 530 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 USP17L13C9JLJ4 530 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 USP17L11C9JVI0 530 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 USP17L18D6R9N7 530 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 USP17L22D6RA61 530 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 USP17L17D6RBQ6 530 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 USP17L19D6RCP7 530 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 USP17L20D6RJB6 530 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 SERPINC1P01008 464 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 CAP2P40123 477 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 STAT6P42226 847 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 GMPSP49915 693 aaPredicted RBP20.63■□□□□ 0.89
COL9A3-205ENST00000466192 USP17L24Q0WX57 530 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 RASA3Q14644 834 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 HSP90AA4PQ58FG1 418 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 USP17L6PQ6QN14 398 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 AK8Q96MA6 479 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 GSDMAQ96QA5 445 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 BLZF1Q9H2G9 400 aa20.63■□□□□ 0.89
COL9A3-205ENST00000466192 FZD9O00144 591 aa20.62■□□□□ 0.89
COL9A3-205ENST00000466192 MMP14P50281 582 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms