RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 ISL2Q96A47 359 aa6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 OSBPL7Q9BZF2 842 aa6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 CBX8Q9HC52 389 aa6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 CACNA2D2Q9NY47 1150 aa6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 PPP1R1BQ9UD71 204 aaPredicted RBP6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 SLC5A6Q9Y289 635 aa6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 ZBTB1Q9Y2K1 713 aa6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 USP16Q9Y5T5 823 aa6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 BCORQ6W2J9 1755 aa6.34□□□□□ -1.4
EXOSC3-204ENST00000465860 HEG1Q9ULI3 1381 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 SCN7AQ01118 1682 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 BRCA1P38398 1863 aaKnown RBP6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 BTBD11A6QL63 1104 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 ENC1O14682 589 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 PAGE1O75459 146 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 A1BGP04217 495 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 GYS1P13807 737 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 BMP6P22004 513 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 GSTT1P30711 240 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 ERVK-24P63145 666 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 BNIP3Q12983 259 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 RNF214Q8ND24 703 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 GRIN3AQ8TCU5 1115 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 NETO1Q8TDF5 533 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 FBF1Q8TES7 1133 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 DUSP23Q9BVJ7 150 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 EMILIN2Q9BXX0 1053 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 WWC3Q9ULE0 1092 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 IVNS1ABPQ9Y6Y0 642 aa6.33□□□□□ -1.4
EXOSC3-204ENST00000465860 SOS1Q07889 1333 aaPredicted RBP6.32□□□□□ -1.4
EXOSC3-204ENST00000465860 FBXO24O75426 580 aa6.32□□□□□ -1.4
EXOSC3-204ENST00000465860 ITGB5P18084 799 aa6.32□□□□□ -1.4
EXOSC3-204ENST00000465860 TMPOP42166 694 aaKnown RBP6.32□□□□□ -1.4
EXOSC3-204ENST00000465860 RIPK4P57078 832 aa6.32□□□□□ -1.4
EXOSC3-204ENST00000465860 SSU72Q9NP77 194 aaKnown RBP6.32□□□□□ -1.4
EXOSC3-204ENST00000465860 NRXN2Q9P2S2 1712 aa6.32□□□□□ -1.4
EXOSC3-204ENST00000465860 ANKRD31Q8N7Z5 1873 aa6.32□□□□□ -1.4
EXOSC3-204ENST00000465860 COL15A1P39059 1388 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 USP42Q9H9J4 1324 aaKnown RBP6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 CHD4Q14839 1912 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 HTATSF1O43719 755 aaKnown RBP6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 DDR1Q08345 913 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 TAF7Q15545 349 aaPredicted RBP6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 KRT24Q2M2I5 525 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 PPM1JQ5JR12 505 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 ZSCAN29Q8IWY8 852 aaPredicted RBP6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 TTC5Q8N0Z6 440 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 STK11IPQ8N1F8 1099 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 TOP6BLQ8N6T0 577 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 FLAD1Q8NFF5 587 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 RTF1Q92541 710 aaKnown RBP6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 MISP3Q96FF7 219 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 ASB16Q96NS5 453 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 KRTAP9-9Q9BYP9 154 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 SRCIN1Q9C0H9 1055 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 CSADQ9Y600 493 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 NUP98P52948 1817 aa6.31□□□□□ -1.4
EXOSC3-204ENST00000465860 ARID1BQ8NFD5 2236 aaPredicted RBP6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 MAPK8IP3Q9UPT6 1336 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 MMP10P09238 476 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 CD8BP10966 210 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 YBX3P16989 372 aaKnown RBP eCLIP6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 POLD1P28340 1107 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 NTF4P34130 210 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 RFC4P35249 363 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 EIF5P55010 431 aaKnown RBP6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 OXCT1P55809 520 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 EIF4A1P60842 406 aaKnown RBP6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 WDR43Q15061 677 aaKnown RBP eCLIP6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 PLCL1Q15111 1095 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 RASIP1Q5U651 963 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 UBE3DQ7Z6J8 389 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 RUNDC1Q96C34 613 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 CEP44Q9C0F1 390 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 PPM1HQ9ULR3 514 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 PLAGL2Q9UPG8 496 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 COL11A2P13942 1736 aaPredicted RBP6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 CACNA1SQ13698 1873 aa6.3□□□□□ -1.4
EXOSC3-204ENST00000465860 DCDC2CA8MYV0 355 aa6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 POLRMTO00411 1230 aaKnown RBP6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 APAF1O14727 1248 aa6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 JUNBP17275 347 aaPredicted RBP6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 TM4SF1P30408 202 aa6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 CD96P40200 585 aa6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 ZNF792Q3KQV3 632 aa6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 ALG1LQ6GMV1 187 aa6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 C10orf71Q711Q0 1435 aa6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 C12orf40Q86WS4 652 aa6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 PNISRQ8TF01 805 aaKnown RBP6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 ASIC4Q96FT7 647 aa6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 HEXIM2Q96MH2 286 aaKnown RBP6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 MKNK2Q9HBH9 465 aa6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 NARFQ9UHQ1 456 aa6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 VAV3Q9UKW4 847 aa6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 SAMM50Q9Y512 469 aa6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 CARMIL3Q8ND23 1372 aa6.29□□□□□ -1.4
EXOSC3-204ENST00000465860 DLEC1Q9Y238 1755 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms