RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 HERC6Q8IVU3 1022 aa11.71□□□□□ -0.53
USP39-212ENST00000465514 LCORLQ8N3X6 602 aa11.71□□□□□ -0.53
USP39-212ENST00000465514 SDR42E1Q8WUS8 393 aa11.71□□□□□ -0.53
USP39-212ENST00000465514 DCP1AQ9NPI6 582 aaPredicted RBP11.71□□□□□ -0.53
USP39-212ENST00000465514 FBXO28Q9NVF7 368 aa11.71□□□□□ -0.53
USP39-212ENST00000465514 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.71□□□□□ -0.53
USP39-212ENST00000465514 ADAMTS5Q9UNA0 930 aa11.71□□□□□ -0.53
USP39-212ENST00000465514 COG6Q9Y2V7 657 aa11.71□□□□□ -0.53
USP39-212ENST00000465514 PTPRZ1P23471 2315 aaPredicted RBP11.71□□□□□ -0.54
USP39-212ENST00000465514 TRIP12Q14669 1992 aaPredicted RBP11.7□□□□□ -0.54
USP39-212ENST00000465514 MYH7P12883 1935 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 ASTN1O14525 1302 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 VWA5AO00534 786 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 WDR46O15213 610 aaKnown RBP11.7□□□□□ -0.54
USP39-212ENST00000465514 RAB11FIP3O75154 756 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 ACTN1P12814 892 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 COPB2P35606 906 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 SLFNL1Q499Z3 407 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 PIP4P2Q8N4L2 257 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 MFSD14AQ96MC6 490 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 VCPKMTQ9H867 229 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 ARMT1Q9H993 441 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 ZBTB40Q9NUA8 1239 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 PAG1Q9NWQ8 432 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 LMCD1Q9NZU5 365 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 DDX19BQ9UMR2 479 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 CACNA1BQ00975 2339 aa11.7□□□□□ -0.54
USP39-212ENST00000465514 DNAJC25-GNG10A0A024R161 153 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 LCHNA4D1U4 455 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 GRXCR2A6NFK2 248 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 KIF28PB7ZC32 967 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 PRKAB2O43741 272 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 GFRA3O60609 400 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 CABYRO75952 493 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 PTPN5P54829 565 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 PSMC6P62333 389 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 NKX3-2P78367 333 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 ZNF467Q7Z7K2 595 aaPredicted RBP11.69□□□□□ -0.54
USP39-212ENST00000465514 SIAH1Q8IUQ4 282 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 REPS2Q8NFH8 660 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 PHOSPHO2Q8TCD6 241 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 DDX11Q96FC9 970 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 DYNLL2Q96FJ2 89 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 BOLA2Q9H3K6 86 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 ABHD16BQ9H3Z7 469 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 ARHGEF10LQ9HCE6 1279 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 MTUS1Q9ULD2 1270 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 TMX2Q9Y320 296 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 PLXNA3P51805 1871 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 VPS13AQ96RL7 3174 aa11.69□□□□□ -0.54
USP39-212ENST00000465514 ATG2AQ2TAZ0 1938 aa11.68□□□□□ -0.54
USP39-212ENST00000465514 RIF1Q5UIP0 2472 aaKnown RBP11.68□□□□□ -0.54
USP39-212ENST00000465514 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.68□□□□□ -0.54
USP39-212ENST00000465514 MBD4O95243 580 aa11.68□□□□□ -0.54
USP39-212ENST00000465514 CYP2C9P11712 490 aa11.68□□□□□ -0.54
USP39-212ENST00000465514 ATP5JP18859 108 aa11.68□□□□□ -0.54
USP39-212ENST00000465514 PTGS1P23219 599 aa11.68□□□□□ -0.54
USP39-212ENST00000465514 ADD2P35612 726 aa11.68□□□□□ -0.54
USP39-212ENST00000465514 ICA1Q05084 483 aa11.68□□□□□ -0.54
USP39-212ENST00000465514 ZP2Q05996 745 aa11.68□□□□□ -0.54
USP39-212ENST00000465514 FSCN1Q16658 493 aaKnown RBP11.68□□□□□ -0.54
USP39-212ENST00000465514 NOL8Q76FK4 1167 aaKnown RBP11.68□□□□□ -0.54
USP39-212ENST00000465514 ARMCX2Q7L311 632 aa11.68□□□□□ -0.54
USP39-212ENST00000465514 FGD4Q96M96 766 aa11.68□□□□□ -0.54
USP39-212ENST00000465514 SH2D4AQ9H788 454 aa11.68□□□□□ -0.54
USP39-212ENST00000465514 ATP8A2Q9NTI2 1148 aa11.68□□□□□ -0.54
USP39-212ENST00000465514 TRMT13Q9NUP7 481 aaKnown RBP11.68□□□□□ -0.54
USP39-212ENST00000465514 PPP1R9AQ9ULJ8 1098 aa11.68□□□□□ -0.54
USP39-212ENST00000465514 DMDP11532 3685 aa11.68□□□□□ -0.54
USP39-212ENST00000465514 FAM186AA6NE01 2351 aa11.67□□□□□ -0.54
USP39-212ENST00000465514 CYP2D7A0A087X1C5 515 aa11.67□□□□□ -0.54
USP39-212ENST00000465514 H3BQ06 376 aaPredicted RBP11.67□□□□□ -0.54
USP39-212ENST00000465514 CHGBP05060 677 aa11.67□□□□□ -0.54
USP39-212ENST00000465514 AKR1B1P15121 316 aa11.67□□□□□ -0.54
USP39-212ENST00000465514 TNFAIP2Q03169 654 aa11.67□□□□□ -0.54
USP39-212ENST00000465514 IER5LQ5T953 404 aa11.67□□□□□ -0.54
USP39-212ENST00000465514 SNRNP48Q6IEG0 339 aaKnown RBP11.67□□□□□ -0.54
USP39-212ENST00000465514 TMCO2Q7Z6W1 182 aaPredicted RBP11.67□□□□□ -0.54
USP39-212ENST00000465514 TLK2Q86UE8 772 aa11.67□□□□□ -0.54
USP39-212ENST00000465514 HAUS7Q99871 368 aa11.67□□□□□ -0.54
USP39-212ENST00000465514 TEX13BQ9BXU2 312 aa11.67□□□□□ -0.54
USP39-212ENST00000465514 SEZ6LQ9BYH1 1024 aa11.67□□□□□ -0.54
USP39-212ENST00000465514 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP39-212ENST00000465514 KATNBL1Q9H079 304 aa11.67□□□□□ -0.54
USP39-212ENST00000465514 ALDH8A1Q9H2A2 487 aaPredicted RBP11.67□□□□□ -0.54
USP39-212ENST00000465514 RIPK3Q9Y572 518 aa11.67□□□□□ -0.54
USP39-212ENST00000465514 USP17L12C9JPN9 530 aa11.66□□□□□ -0.54
USP39-212ENST00000465514 USP17L21D6R901 530 aa11.66□□□□□ -0.54
USP39-212ENST00000465514 CDK8P49336 464 aa11.66□□□□□ -0.54
USP39-212ENST00000465514 FXR2P51116 673 aaKnown RBP eCLIP11.66□□□□□ -0.54
USP39-212ENST00000465514 PUS10Q3MIT2 529 aaKnown RBP11.66□□□□□ -0.54
USP39-212ENST00000465514 C12orf60Q5U649 245 aa11.66□□□□□ -0.54
USP39-212ENST00000465514 CCDC144CPQ8IYA2 1237 aa11.66□□□□□ -0.54
USP39-212ENST00000465514 FTOQ9C0B1 505 aaKnown RBP eCLIP11.66□□□□□ -0.54
USP39-212ENST00000465514 CHMP4BQ9H444 224 aaKnown RBP11.66□□□□□ -0.54
USP39-212ENST00000465514 SUGCTQ9HAC7 445 aa11.66□□□□□ -0.54
USP39-212ENST00000465514 FAM86C1Q9NVL1 165 aa11.66□□□□□ -0.54
USP39-212ENST00000465514 SCN10AQ9Y5Y9 1956 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms