RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 CCDC175P0C221 793 aa21.03■□□□□ 0.96
TSPAN4-210ENST00000464987 KCNB1Q14721 858 aa21.03■□□□□ 0.96
TSPAN4-210ENST00000464987 REXO1Q8N1G1 1221 aaKnown RBP21.03■□□□□ 0.96
TSPAN4-210ENST00000464987 COA1Q9GZY4 146 aa21.03■□□□□ 0.96
TSPAN4-210ENST00000464987 DDX41Q9UJV9 622 aaKnown RBP21.03■□□□□ 0.96
TSPAN4-210ENST00000464987 PLIN4Q96Q06 1357 aa21.03■□□□□ 0.96
TSPAN4-210ENST00000464987 GOLGA6L9A6NEM1 432 aa21.02■□□□□ 0.96
TSPAN4-210ENST00000464987 ABL1P00519 1130 aa21.02■□□□□ 0.96
TSPAN4-210ENST00000464987 ERVK-24P63145 666 aa21.02■□□□□ 0.96
TSPAN4-210ENST00000464987 MYH7BA7E2Y1 1941 aa21.02■□□□□ 0.96
TSPAN4-210ENST00000464987 IGKV6D-41A0A0C4DH26 115 aa21.02■□□□□ 0.96
TSPAN4-210ENST00000464987 SMARCA1P28370 1054 aa21.02■□□□□ 0.96
TSPAN4-210ENST00000464987 GIMAP8Q8ND71 665 aaPredicted RBP21.02■□□□□ 0.96
TSPAN4-210ENST00000464987 FEZ1Q99689 392 aa21.02■□□□□ 0.96
TSPAN4-210ENST00000464987 ZC3H12CQ9C0D7 883 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-210ENST00000464987 PRDM4Q9UKN5 801 aa21.02■□□□□ 0.96
TSPAN4-210ENST00000464987 H7C1D1 291 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 SRGNP10124 158 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 TXKP42681 527 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 UBXN1Q04323 297 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 SPAG1Q07617 926 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 ARHGAP29Q52LW3 1261 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 TTBK2Q6IQ55 1244 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 CNGA4Q8IV77 575 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 ACRBPQ8NEB7 543 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 NUP88Q99567 741 aaPredicted RBP21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 NAA15Q9BXJ9 866 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 SRRTQ9BXP5 876 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 TRIM9Q9C026 710 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 EPC1Q9H2F5 836 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 KCNQ5Q9NR82 932 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 ABHD10Q9NUJ1 306 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 USP40Q9NVE5 1235 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 ZNF446Q9NWS9 450 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 COL11A2P13942 1736 aaPredicted RBP21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 SLC37A4O43826 429 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 FCER1AP12319 257 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 HPS3Q969F9 1004 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 AK8Q96MA6 479 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 PCDHAC2Q9Y5I4 1007 aa21.01■□□□□ 0.95
TSPAN4-210ENST00000464987 TADA3O75528 432 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 TDP2O95551 362 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 SNHG28P0DPA3 235 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 H2AFXP16104 143 aaPredicted RBP21■□□□□ 0.95
TSPAN4-210ENST00000464987 MAP3K9P80192 1104 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 NFIAQ12857 509 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 STK4Q13043 487 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 KRT27Q7Z3Y8 459 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 SERPINB13Q9UIV8 391 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 NRXN2Q9P2S2 1712 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 PPP1R11O60927 126 aaPredicted RBP21■□□□□ 0.95
TSPAN4-210ENST00000464987 SHMT1P34896 483 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 TTI2Q6NXR4 508 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 CDC42EP5Q6NZY7 148 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 ZFPM1Q8IX07 1006 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 MNS1Q8NEH6 495 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 TRIM47Q96LD4 638 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 OGFRQ9NZT2 677 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 MRFAP1Q9Y605 127 aa21■□□□□ 0.95
TSPAN4-210ENST00000464987 ESYT2A0FGR8 921 aa20.99■□□□□ 0.95
TSPAN4-210ENST00000464987 NKRFO15226 690 aaKnown RBP eCLIP20.99■□□□□ 0.952e-6■■■□□ 15.4
TSPAN4-210ENST00000464987 FECHP22830 423 aa20.99■□□□□ 0.95
TSPAN4-210ENST00000464987 PDE4DQ08499 809 aa20.99■□□□□ 0.95
TSPAN4-210ENST00000464987 ILDR2Q71H61 639 aa20.99■□□□□ 0.95
TSPAN4-210ENST00000464987 ANKRD20A12PQ8NF67 263 aa20.99■□□□□ 0.95
TSPAN4-210ENST00000464987 DUSP9Q99956 384 aaKnown RBP20.99■□□□□ 0.95
TSPAN4-210ENST00000464987 MYL1P05976 194 aa20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 SLC16A2P36021 539 aa20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 UBE2SQ16763 222 aa20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 SHROOM1Q2M3G4 852 aaPredicted RBP20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 ASPRV1Q53RT3 343 aa20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 COL23A1Q86Y22 540 aaPredicted RBP20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 MTMR9Q96QG7 549 aa20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 JMJD4Q9H9V9 463 aa20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 GREB1LQ9C091 1923 aaPredicted RBP20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 PES1O00541 588 aaKnown RBP20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 TTLL1O95922 423 aa20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 KRT9P35527 623 aa20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 CLCN6P51797 869 aa20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 ASIC1P78348 528 aa20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 ATP2B2Q01814 1243 aa20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 APOBEC3HQ6NTF7 200 aaKnown RBP20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 SMAP1Q8IYB5 467 aaPredicted RBP20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 ADGRF4Q8IZF3 695 aa20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 UBXN4Q92575 508 aa20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 CHP1Q99653 195 aa20.98■□□□□ 0.95
TSPAN4-210ENST00000464987 POTEMA6NI47 508 aa20.97■□□□□ 0.95
TSPAN4-210ENST00000464987 FAM196BA6NMK8 535 aa20.97■□□□□ 0.95
TSPAN4-210ENST00000464987 PSMA7O14818 248 aa20.97■□□□□ 0.95
TSPAN4-210ENST00000464987 ADCY7P51828 1080 aa20.97■□□□□ 0.95
TSPAN4-210ENST00000464987 CACNB3P54284 484 aa20.97■□□□□ 0.95
TSPAN4-210ENST00000464987 GRB10Q13322 594 aa20.97■□□□□ 0.95
TSPAN4-210ENST00000464987 KCTD1Q719H9 257 aa20.97■□□□□ 0.95
TSPAN4-210ENST00000464987 TMC4Q7Z404 712 aa20.97■□□□□ 0.95
TSPAN4-210ENST00000464987 MB21D1Q8N884 522 aa20.97■□□□□ 0.95
TSPAN4-210ENST00000464987 ZNF507Q8TCN5 953 aa20.97■□□□□ 0.95
TSPAN4-210ENST00000464987 GJA10Q969M2 543 aa20.97■□□□□ 0.95
TSPAN4-210ENST00000464987 RGS17Q9UGC6 210 aaPredicted RBP20.97■□□□□ 0.95
TSPAN4-210ENST00000464987 SIPA1L1O43166 1804 aa20.97■□□□□ 0.95
TSPAN4-210ENST00000464987 ARFGEF1Q9Y6D6 1849 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms