RNA–Protein interactions for RNA: ENST00000464748.1

CDK11A-211, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-211ENST00000464748 MAML3Q96JK9 1138 aa23.27■■□□□ 1.32
CDK11A-211ENST00000464748 AMNQ9BXJ7 453 aa23.27■■□□□ 1.32
CDK11A-211ENST00000464748 A1CFQ9NQ94 594 aaKnown RBP23.27■■□□□ 1.32
CDK11A-211ENST00000464748 SEC24BO95487 1268 aa23.26■■□□□ 1.31
CDK11A-211ENST00000464748 CAPN2P17655 700 aa23.26■■□□□ 1.31
CDK11A-211ENST00000464748 CCL14Q16627 93 aa23.26■■□□□ 1.31
CDK11A-211ENST00000464748 MUM1L1Q5H9M0 696 aa23.26■■□□□ 1.31
CDK11A-211ENST00000464748 MAP3K21Q5TCX8 1036 aa23.26■■□□□ 1.31
CDK11A-211ENST00000464748 BRF1Q92994 677 aa23.26■■□□□ 1.31
CDK11A-211ENST00000464748 BRPF3Q9ULD4 1205 aa23.26■■□□□ 1.31
CDK11A-211ENST00000464748 MRPL11Q9Y3B7 192 aaKnown RBP23.26■■□□□ 1.31
CDK11A-211ENST00000464748 CENPFP49454 3210 aa23.25■■□□□ 1.31
CDK11A-211ENST00000464748 PNMA6FA0A0J9YX94 578 aa23.25■■□□□ 1.31
CDK11A-211ENST00000464748 CCDC196A0A1B0GTZ2 297 aa23.25■■□□□ 1.31
CDK11A-211ENST00000464748 CYTH3O43739 400 aa23.25■■□□□ 1.31
CDK11A-211ENST00000464748 IGHA2P01877 340 aa23.25■■□□□ 1.31
CDK11A-211ENST00000464748 PGK2P07205 417 aa23.25■■□□□ 1.31
CDK11A-211ENST00000464748 RTN1Q16799 776 aa23.25■■□□□ 1.31
CDK11A-211ENST00000464748 USH1GQ495M9 461 aa23.25■■□□□ 1.31
CDK11A-211ENST00000464748 TMTC3Q6ZXV5 915 aa23.25■■□□□ 1.31
CDK11A-211ENST00000464748 RGS22Q8NE09 1264 aa23.25■■□□□ 1.31
CDK11A-211ENST00000464748 RRP36Q96EU6 259 aaKnown RBP23.25■■□□□ 1.31
CDK11A-211ENST00000464748 RPTORQ8N122 1335 aa23.25■■□□□ 1.31
CDK11A-211ENST00000464748 NID2Q14112 1375 aa23.25■■□□□ 1.31
CDK11A-211ENST00000464748 BAZ2BQ9UIF8 2168 aaKnown RBP23.24■■□□□ 1.31
CDK11A-211ENST00000464748 GOLGA8AA7E2F4 631 aa23.24■■□□□ 1.31
CDK11A-211ENST00000464748 GOLGA8BA8MQT2 603 aa23.24■■□□□ 1.31
CDK11A-211ENST00000464748 POTEB2H3BUK9 544 aa23.24■■□□□ 1.31
CDK11A-211ENST00000464748 CCL5P13501 91 aa23.24■■□□□ 1.31
CDK11A-211ENST00000464748 PRKAR2AP13861 404 aaKnown RBP23.24■■□□□ 1.31
CDK11A-211ENST00000464748 RXRAP19793 462 aa23.24■■□□□ 1.31
CDK11A-211ENST00000464748 EVCP57679 992 aa23.24■■□□□ 1.31
CDK11A-211ENST00000464748 MCF2L2Q86YR7 1114 aa23.24■■□□□ 1.31
CDK11A-211ENST00000464748 CLEC4DQ8WXI8 215 aa23.24■■□□□ 1.31
CDK11A-211ENST00000464748 UPF3BQ9BZI7 483 aaKnown RBP23.24■■□□□ 1.31
CDK11A-211ENST00000464748 HMX1Q9NP08 348 aaPredicted RBP23.24■■□□□ 1.31
CDK11A-211ENST00000464748 CYP39A1Q9NYL5 469 aa23.24■■□□□ 1.31
CDK11A-211ENST00000464748 FLRT1Q9NZU1 646 aa23.24■■□□□ 1.31
CDK11A-211ENST00000464748 SEC63Q9UGP8 760 aaKnown RBP23.24■■□□□ 1.31
CDK11A-211ENST00000464748 NRBP1Q9UHY1 535 aa23.24■■□□□ 1.31
CDK11A-211ENST00000464748 METAP2P50579 478 aaKnown RBP eCLIP23.23■■□□□ 1.31
CDK11A-211ENST00000464748 APOBRQ0VD83 1088 aa23.23■■□□□ 1.31
CDK11A-211ENST00000464748 MTFR1Q15390 333 aa23.23■■□□□ 1.31
CDK11A-211ENST00000464748 SLC35G1Q2M3R5 365 aa23.23■■□□□ 1.31
CDK11A-211ENST00000464748 NSMFQ6X4W1 530 aa23.23■■□□□ 1.31
CDK11A-211ENST00000464748 HOMER1Q86YM7 354 aa23.23■■□□□ 1.31
CDK11A-211ENST00000464748 CCDC144CPQ8IYA2 1237 aa23.23■■□□□ 1.31
CDK11A-211ENST00000464748 FAM133AQ8N9E0 248 aa23.23■■□□□ 1.31
CDK11A-211ENST00000464748 PIGSQ96S52 555 aa23.23■■□□□ 1.31
CDK11A-211ENST00000464748 RNF208Q9H0X6 261 aa23.23■■□□□ 1.31
CDK11A-211ENST00000464748 PDRG1Q9NUG6 133 aa23.23■■□□□ 1.31
CDK11A-211ENST00000464748 NAP1L2Q9ULW6 460 aaPredicted RBP23.23■■□□□ 1.31
CDK11A-211ENST00000464748 LOC102724159A0A0B4J2E5 919 aa23.22■■□□□ 1.31
CDK11A-211ENST00000464748 NFIBO00712 420 aa23.22■■□□□ 1.31
CDK11A-211ENST00000464748 PLEKHA8P1O95397 391 aa23.22■■□□□ 1.31
CDK11A-211ENST00000464748 CACNB2Q08289 660 aaPredicted RBP23.22■■□□□ 1.31
CDK11A-211ENST00000464748 PWP2Q15269 919 aaKnown RBP23.22■■□□□ 1.31
CDK11A-211ENST00000464748 IFFO2Q5TF58 517 aa23.22■■□□□ 1.31
CDK11A-211ENST00000464748 MAMDC4Q6UXC1 1216 aa23.22■■□□□ 1.31
CDK11A-211ENST00000464748 SRBD1Q8N5C6 995 aaKnown RBP23.22■■□□□ 1.31
CDK11A-211ENST00000464748 SAMD3Q8N6K7 520 aa23.22■■□□□ 1.31
CDK11A-211ENST00000464748 TINF2Q9BSI4 451 aa23.22■■□□□ 1.31
CDK11A-211ENST00000464748 UNC93B1Q9H1C4 597 aa23.22■■□□□ 1.31
CDK11A-211ENST00000464748 ALDH8A1Q9H2A2 487 aaPredicted RBP23.22■■□□□ 1.31
CDK11A-211ENST00000464748 UPF2Q9HAU5 1272 aaKnown RBP23.22■■□□□ 1.31
CDK11A-211ENST00000464748 PAK6Q9NQU5 681 aaPredicted RBP23.22■■□□□ 1.31
CDK11A-211ENST00000464748 SYNGAP1Q96PV0 1343 aa23.22■■□□□ 1.31
CDK11A-211ENST00000464748 GJB1P08034 283 aa23.21■■□□□ 1.31
CDK11A-211ENST00000464748 TOB2Q14106 344 aaPredicted RBP23.21■■□□□ 1.31
CDK11A-211ENST00000464748 RNF207Q6ZRF8 634 aa23.21■■□□□ 1.31
CDK11A-211ENST00000464748 RAB11FIP4Q86YS3 637 aa23.21■■□□□ 1.31
CDK11A-211ENST00000464748 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.21■■□□□ 1.31
CDK11A-211ENST00000464748 PCDHA1Q9Y5I3 950 aa23.21■■□□□ 1.31
CDK11A-211ENST00000464748 KIAA0100Q14667 2235 aaKnown RBP23.2■■□□□ 1.3
CDK11A-211ENST00000464748 PTPDC1A2A3K4 754 aa23.2■■□□□ 1.3
CDK11A-211ENST00000464748 TAL1P17542 331 aaPredicted RBP23.2■■□□□ 1.3
CDK11A-211ENST00000464748 TRIM32Q13049 653 aa23.2■■□□□ 1.3
CDK11A-211ENST00000464748 BAATQ14032 418 aaPredicted RBP23.2■■□□□ 1.3
CDK11A-211ENST00000464748 ANKRD1Q15327 319 aa23.2■■□□□ 1.3
CDK11A-211ENST00000464748 MAP3K20Q9NYL2 800 aaKnown RBP23.2■■□□□ 1.3
CDK11A-211ENST00000464748 ADD3Q9UEY8 706 aaKnown RBP23.2■■□□□ 1.3
CDK11A-211ENST00000464748 ASB14A6NK59 587 aa23.19■■□□□ 1.3
CDK11A-211ENST00000464748 PPP1R11O60927 126 aaPredicted RBP23.19■■□□□ 1.3
CDK11A-211ENST00000464748 MYCP01106 439 aaPredicted RBP23.19■■□□□ 1.3
CDK11A-211ENST00000464748 CYBAP13498 195 aa23.19■■□□□ 1.3
CDK11A-211ENST00000464748 CYP2C19P33261 490 aa23.19■■□□□ 1.3
CDK11A-211ENST00000464748 ZNF274Q96GC6 653 aaPredicted RBP23.19■■□□□ 1.3
CDK11A-211ENST00000464748 LCTP09848 1927 aa23.18■■□□□ 1.3
CDK11A-211ENST00000464748 CNTNAP5Q8WYK1 1306 aa23.18■■□□□ 1.3
CDK11A-211ENST00000464748 MSCO60682 206 aa23.18■■□□□ 1.3
CDK11A-211ENST00000464748 GJA8P48165 433 aa23.18■■□□□ 1.3
CDK11A-211ENST00000464748 SOX10P56693 466 aa23.18■■□□□ 1.3
CDK11A-211ENST00000464748 RPS6P62753 249 aaKnown RBP23.18■■□□□ 1.3
CDK11A-211ENST00000464748 CNTN2Q02246 1040 aa23.18■■□□□ 1.3
CDK11A-211ENST00000464748 GHRHRQ02643 423 aa23.18■■□□□ 1.3
CDK11A-211ENST00000464748 DNERQ8NFT8 737 aa23.18■■□□□ 1.3
CDK11A-211ENST00000464748 FGD4Q96M96 766 aa23.18■■□□□ 1.3
CDK11A-211ENST00000464748 MPHOSPH6Q99547 160 aaKnown RBP23.18■■□□□ 1.3
CDK11A-211ENST00000464748 CNPY2Q9Y2B0 182 aa23.18■■□□□ 1.3
CDK11A-211ENST00000464748 B4DLN1 442 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms