RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 CSRNP1Q96S65 589 aa11.13□□□□□ -0.63
ATF3-207ENST00000464547 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.13□□□□□ -0.63
ATF3-207ENST00000464547 IMPACTQ9P2X3 320 aa11.13□□□□□ -0.63
ATF3-207ENST00000464547 ATF5Q9Y2D1 282 aaPredicted RBP11.13□□□□□ -0.63
ATF3-207ENST00000464547 PPP1R3GB7ZBB8 358 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 CBFA2T2O43439 604 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 RAD21O60216 631 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 NDUFB10O96000 172 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 ZNF18P17022 549 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 UBA7P41226 1012 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 CLK2P49760 499 aaKnown RBP11.12□□□□□ -0.63
ATF3-207ENST00000464547 MRPL12P52815 198 aaKnown RBP11.12□□□□□ -0.63
ATF3-207ENST00000464547 CXCL9Q07325 125 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 CDC37Q16543 378 aaPredicted RBP11.12□□□□□ -0.63
ATF3-207ENST00000464547 UBE2SQ16763 222 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 NAALADL2Q58DX5 795 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 DALRD3Q5D0E6 543 aaKnown RBP11.12□□□□□ -0.63
ATF3-207ENST00000464547 TMC6Q7Z403 805 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 FILIP1Q7Z7B0 1213 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 CABP7Q86V35 215 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 LRRC8AQ8IWT6 810 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 TRMT44Q8IYL2 757 aaKnown RBP11.12□□□□□ -0.63
ATF3-207ENST00000464547 CUL5Q93034 780 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 GMCL1Q96IK5 515 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 ZBED3Q96IU2 234 aaPredicted RBP11.12□□□□□ -0.63
ATF3-207ENST00000464547 AK8Q96MA6 479 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 NAP1L5Q96NT1 182 aaPredicted RBP11.12□□□□□ -0.63
ATF3-207ENST00000464547 MTMR9Q96QG7 549 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 NUP88Q99567 741 aaPredicted RBP11.12□□□□□ -0.63
ATF3-207ENST00000464547 DISC1Q9NRI5 854 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 HERC5Q9UII4 1024 aaKnown RBP11.12□□□□□ -0.63
ATF3-207ENST00000464547 EP400Q96L91 3159 aa11.12□□□□□ -0.63
ATF3-207ENST00000464547 SOCS7O14512 581 aa11.11□□□□□ -0.63
ATF3-207ENST00000464547 TDP2O95551 362 aa11.11□□□□□ -0.63
ATF3-207ENST00000464547 SERPINC1P01008 464 aa11.11□□□□□ -0.63
ATF3-207ENST00000464547 TNNI2P48788 182 aa11.11□□□□□ -0.63
ATF3-207ENST00000464547 UBASH3AP57075 661 aa11.11□□□□□ -0.63
ATF3-207ENST00000464547 GSDMDP57764 484 aa11.11□□□□□ -0.63
ATF3-207ENST00000464547 SYDE2Q5VT97 1194 aa11.11□□□□□ -0.63
ATF3-207ENST00000464547 FKBP1CQ5VVH2 108 aa11.11□□□□□ -0.63
ATF3-207ENST00000464547 OGFOD1Q8N543 542 aa11.11□□□□□ -0.63
ATF3-207ENST00000464547 LRRC15Q8TF66 581 aa11.11□□□□□ -0.63
ATF3-207ENST00000464547 PLIN2Q99541 437 aa11.11□□□□□ -0.63
ATF3-207ENST00000464547 PSTPIP2Q9H939 334 aa11.11□□□□□ -0.63
ATF3-207ENST00000464547 NFE2L3Q9Y4A8 694 aa11.11□□□□□ -0.63
ATF3-207ENST00000464547 A0A1W2PRG0 241 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 SLC37A4O43826 429 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 RPN1P04843 607 aaKnown RBP11.1□□□□□ -0.63
ATF3-207ENST00000464547 BMP3P12645 472 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 POLD1P28340 1107 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 TECP42680 631 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 STX17P56962 302 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 CCZ1BP86790 482 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 CCZ1P86791 482 aaPredicted RBP11.1□□□□□ -0.63
ATF3-207ENST00000464547 CALCRLQ16602 461 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 SPATA1Q5VX52 437 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 CIAPIN1Q6FI81 312 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 BTNL9Q6UXG8 535 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 CCDC125Q86Z20 511 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 SMYD4Q8IYR2 804 aaPredicted RBP11.1□□□□□ -0.63
ATF3-207ENST00000464547 RASSF8Q8NHQ8 419 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 GLT8D2Q9H1C3 349 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 CUEDC2Q9H467 287 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 VEZTQ9HBM0 779 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 SAMSN1Q9NSI8 373 aaKnown RBP11.1□□□□□ -0.63
ATF3-207ENST00000464547 INTS13Q9NVM9 706 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 RMND1Q9NWS8 449 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 PGAP2Q9UHJ9 254 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 SYNPO2Q9UMS6 1093 aa11.1□□□□□ -0.63
ATF3-207ENST00000464547 SYNRGQ9UMZ2 1314 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 ARFGEF1Q9Y6D6 1849 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 TMEM232C9JQI7 657 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 KLRC4O43908 158 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 TBC1D12O60347 775 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 PLCG1P19174 1290 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 TXKP42681 527 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 FXR2P51116 673 aaKnown RBP eCLIP11.09□□□□□ -0.63
ATF3-207ENST00000464547 SNAP25P60880 206 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 ZNF658Q5TYW1 1059 aaPredicted RBP11.09□□□□□ -0.63
ATF3-207ENST00000464547 PPP4R3AQ6IN85 833 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 KLHL10Q6JEL2 608 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 ARMCX5Q6P1M9 558 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 FAM83AQ86UY5 434 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 VSTM4Q8IW00 320 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 CDAN1Q8IWY9 1227 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 IGSF22Q8N9C0 903 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 CCDC150Q8NCX0 1101 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 ACER1Q8TDN7 264 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 MMTAG2Q9BU76 263 aaKnown RBP11.09□□□□□ -0.63
ATF3-207ENST00000464547 TMEM39BQ9GZU3 492 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 MTFR1LQ9H019 292 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 TAOK3Q9H2K8 898 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 MAGEF1Q9HAY2 307 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 KBTBD4Q9NVX7 518 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 ZBTB21Q9ULJ3 1066 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 CTNND2Q9UQB3 1225 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 R3HCC1Q9Y3T6 440 aaKnown RBP11.09□□□□□ -0.63
ATF3-207ENST00000464547 PCDHA1Q9Y5I3 950 aa11.09□□□□□ -0.63
ATF3-207ENST00000464547 SHTN1A0MZ66 631 aa11.08□□□□□ -0.64
ATF3-207ENST00000464547 USP17L15C9J2P7 530 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms