RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 TRIM47Q96LD4 638 aa20.28■□□□□ 0.84
LST1-220ENST00000464526 RNF26Q9BY78 433 aaPredicted RBP20.28■□□□□ 0.84
LST1-220ENST00000464526 VPS54Q9P1Q0 977 aa20.28■□□□□ 0.84
LST1-220ENST00000464526 DDX49Q9Y6V7 483 aaKnown RBP20.28■□□□□ 0.84
LST1-220ENST00000464526 RBBP6Q7Z6E9 1792 aaKnown RBP20.28■□□□□ 0.84
LST1-220ENST00000464526 STXBP3O00186 592 aa20.27■□□□□ 0.84
LST1-220ENST00000464526 HSPA8P11142 646 aaKnown RBP20.27■□□□□ 0.84
LST1-220ENST00000464526 LACTBP83111 547 aaPredicted RBP20.27■□□□□ 0.84
LST1-220ENST00000464526 PFKFB3Q16875 520 aaPredicted RBP20.27■□□□□ 0.84
LST1-220ENST00000464526 ORC3Q9UBD5 711 aaPredicted RBP20.27■□□□□ 0.84
LST1-220ENST00000464526 CTDP1Q9Y5B0 961 aaPredicted RBP20.27■□□□□ 0.84
LST1-220ENST00000464526 PCDHA1Q9Y5I3 950 aa20.27■□□□□ 0.84
LST1-220ENST00000464526 SCG2P13521 617 aa20.27■□□□□ 0.84
LST1-220ENST00000464526 SSRP1Q08945 709 aaKnown RBP20.27■□□□□ 0.84
LST1-220ENST00000464526 HSCBQ8IWL3 235 aa20.27■□□□□ 0.84
LST1-220ENST00000464526 TRERF1Q96PN7 1200 aa20.27■□□□□ 0.84
LST1-220ENST00000464526 BEGAINQ9BUH8 593 aa20.27■□□□□ 0.84
LST1-220ENST00000464526 AMNQ9BXJ7 453 aa20.27■□□□□ 0.84
LST1-220ENST00000464526 OAZ1P54368 228 aa20.26■□□□□ 0.83
LST1-220ENST00000464526 SP3Q02447 781 aa20.26■□□□□ 0.83
LST1-220ENST00000464526 SLC30A10Q6XR72 485 aa20.26■□□□□ 0.83
LST1-220ENST00000464526 GTF3C2Q8WUA4 911 aaPredicted RBP20.26■□□□□ 0.83
LST1-220ENST00000464526 SEC63Q9UGP8 760 aaKnown RBP20.26■□□□□ 0.83
LST1-220ENST00000464526 STK36Q9NRP7 1315 aa20.26■□□□□ 0.83
LST1-220ENST00000464526 GPR142Q7Z601 462 aa20.25■□□□□ 0.83
LST1-220ENST00000464526 RBM19Q9Y4C8 960 aaKnown RBP20.25■□□□□ 0.83
LST1-220ENST00000464526 PGK2P07205 417 aa20.25■□□□□ 0.83
LST1-220ENST00000464526 A1CFQ9NQ94 594 aaKnown RBP20.25■□□□□ 0.83
LST1-220ENST00000464526 COL20A1Q9P218 1284 aa20.25■□□□□ 0.83
LST1-220ENST00000464526 ASTN1O14525 1302 aa20.24■□□□□ 0.83
LST1-220ENST00000464526 FDX1P10109 184 aa20.24■□□□□ 0.83
LST1-220ENST00000464526 PSMC4P43686 418 aa20.24■□□□□ 0.83
LST1-220ENST00000464526 LBX1P52954 281 aa20.24■□□□□ 0.83
LST1-220ENST00000464526 BARHL2Q9NY43 387 aa20.24■□□□□ 0.83
LST1-220ENST00000464526 GABRQQ9UN88 632 aa20.24■□□□□ 0.83
LST1-220ENST00000464526 KCNJ14Q9UNX9 436 aa20.24■□□□□ 0.83
LST1-220ENST00000464526 DEXIO95424 95 aa20.23■□□□□ 0.83
LST1-220ENST00000464526 HOXA13P31271 388 aaPredicted RBP20.23■□□□□ 0.83
LST1-220ENST00000464526 GUCY1B3Q02153 619 aa20.23■□□□□ 0.83
LST1-220ENST00000464526 NPY5RQ15761 445 aa20.23■□□□□ 0.83
LST1-220ENST00000464526 UBE2SQ16763 222 aa20.23■□□□□ 0.83
LST1-220ENST00000464526 TRIM22Q8IYM9 498 aa20.23■□□□□ 0.83
LST1-220ENST00000464526 ZNFX1Q9P2E3 1918 aaKnown RBP20.23■□□□□ 0.83
LST1-220ENST00000464526 CDKL5O76039 1030 aa20.23■□□□□ 0.83
LST1-220ENST00000464526 GJB2P29033 226 aa20.23■□□□□ 0.83
LST1-220ENST00000464526 CPLX2Q6PUV4 134 aaKnown RBP20.23■□□□□ 0.83
LST1-220ENST00000464526 NSMFQ6X4W1 530 aa20.23■□□□□ 0.83
LST1-220ENST00000464526 ALG1Q9BT22 464 aa20.23■□□□□ 0.83
LST1-220ENST00000464526 ACAD9Q9H845 621 aa20.23■□□□□ 0.83
LST1-220ENST00000464526 FKTNO75072 461 aa20.22■□□□□ 0.83
LST1-220ENST00000464526 NAPAP54920 295 aa20.22■□□□□ 0.83
LST1-220ENST00000464526 NOM1Q5C9Z4 860 aaKnown RBP20.22■□□□□ 0.83
LST1-220ENST00000464526 USP17L6PQ6QN14 398 aa20.22■□□□□ 0.83
LST1-220ENST00000464526 SHCBP1Q8NEM2 672 aa20.22■□□□□ 0.83
LST1-220ENST00000464526 RASGRP4Q8TDF6 673 aa20.22■□□□□ 0.83
LST1-220ENST00000464526 FGD4Q96M96 766 aa20.22■□□□□ 0.83
LST1-220ENST00000464526 LLPHQ9BRT6 129 aaKnown RBP20.22■□□□□ 0.83
LST1-220ENST00000464526 ABCB11O95342 1321 aa20.22■□□□□ 0.83
LST1-220ENST00000464526 COBLO75128 1261 aa20.21■□□□□ 0.83
LST1-220ENST00000464526 AKAP17AQ02040 695 aaKnown RBP20.21■□□□□ 0.83
LST1-220ENST00000464526 CNTN2Q02246 1040 aa20.21■□□□□ 0.83
LST1-220ENST00000464526 PRKCZQ05513 592 aa20.21■□□□□ 0.83
LST1-220ENST00000464526 PGBD1Q96JS3 809 aa20.21■□□□□ 0.83
LST1-220ENST00000464526 ZNF236Q9UL36 1845 aa20.21■□□□□ 0.83
LST1-220ENST00000464526 TNPO2O14787 897 aaKnown RBP20.2■□□□□ 0.82
LST1-220ENST00000464526 SLC25A27O95847 323 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 CFBP00751 764 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 ADORA2AP29274 412 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 CCNA1P78396 465 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 BAATQ14032 418 aaPredicted RBP20.2■□□□□ 0.82
LST1-220ENST00000464526 PLEKHH3Q7Z736 793 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 TMEM260Q9NX78 707 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 CYP39A1Q9NYL5 469 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 GJD2Q9UKL4 321 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 PLXNA1Q9UIW2 1896 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 PTPREP23469 700 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 MAPK4P31152 587 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 RPS6P62753 249 aaKnown RBP20.2■□□□□ 0.82
LST1-220ENST00000464526 GRB14Q14449 540 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 CHST13Q8NET6 341 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 IL27Q8NEV9 243 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 OXER1Q8TDS5 423 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 MMP19Q99542 508 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 MROH8Q9H579 483 aa20.2■□□□□ 0.82
LST1-220ENST00000464526 MCM3APO60318 1980 aa20.19■□□□□ 0.82
LST1-220ENST00000464526 MEIS2O14770 477 aa20.19■□□□□ 0.82
LST1-220ENST00000464526 CALML3P27482 149 aa20.19■□□□□ 0.82
LST1-220ENST00000464526 MORN1Q5T089 497 aa20.19■□□□□ 0.82
LST1-220ENST00000464526 CCL14Q16627 93 aa20.18■□□□□ 0.82
LST1-220ENST00000464526 CCAR1Q8IX12 1150 aaKnown RBP20.18■□□□□ 0.82
LST1-220ENST00000464526 ANKRD35Q8N283 1001 aa20.18■□□□□ 0.82
LST1-220ENST00000464526 NPLOC4Q8TAT6 608 aa20.18■□□□□ 0.82
LST1-220ENST00000464526 SMC3Q9UQE7 1217 aa20.18■□□□□ 0.82
LST1-220ENST00000464526 MRPL11Q9Y3B7 192 aaKnown RBP20.18■□□□□ 0.82
LST1-220ENST00000464526 LRRC37A2A6NM11 1700 aa20.18■□□□□ 0.82
LST1-220ENST00000464526 DNAJC25-GNG10A0A024R161 153 aa20.18■□□□□ 0.82
LST1-220ENST00000464526 SMCO2A6NFE2 343 aa20.18■□□□□ 0.82
LST1-220ENST00000464526 FCGRTP55899 365 aa20.18■□□□□ 0.82
LST1-220ENST00000464526 TKFCQ3LXA3 575 aa20.18■□□□□ 0.82
LST1-220ENST00000464526 SYTL5Q8TDW5 730 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms