RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 FADS2P1A8MWK0 482 aa6.23□□□□□ -1.41
CLK1-208ENST00000464454 ITGAVP06756 1048 aa6.23□□□□□ -1.41
CLK1-208ENST00000464454 ERVFC1P60507 584 aa6.23□□□□□ -1.41
CLK1-208ENST00000464454 RASGRF1Q13972 1273 aa6.23□□□□□ -1.41
CLK1-208ENST00000464454 JAMLQ86YT9 394 aa6.23□□□□□ -1.41
CLK1-208ENST00000464454 LRRC47Q8N1G4 583 aaKnown RBP6.23□□□□□ -1.41
CLK1-208ENST00000464454 MKL1Q969V6 931 aa6.23□□□□□ -1.41
CLK1-208ENST00000464454 NKX2-4Q9H2Z4 354 aa6.23□□□□□ -1.41
CLK1-208ENST00000464454 SP110Q9HB58 689 aa6.23□□□□□ -1.41
CLK1-208ENST00000464454 CYP26B1Q9NR63 512 aa6.23□□□□□ -1.41
CLK1-208ENST00000464454 FAM53CQ9NYF3 392 aa6.23□□□□□ -1.41
CLK1-208ENST00000464454 EBF1Q9UH73 591 aa6.23□□□□□ -1.41
CLK1-208ENST00000464454 GPR160Q9UJ42 338 aa6.23□□□□□ -1.41
CLK1-208ENST00000464454 HOXC12P31275 282 aa6.22□□□□□ -1.41
CLK1-208ENST00000464454 IFRD2Q12894 506 aaPredicted RBP6.22□□□□□ -1.41
CLK1-208ENST00000464454 CCDC144BQ3MJ40 725 aa6.22□□□□□ -1.41
CLK1-208ENST00000464454 MTERF2Q49AM1 385 aa6.22□□□□□ -1.41
CLK1-208ENST00000464454 FYB2Q5VWT5 728 aa6.22□□□□□ -1.41
CLK1-208ENST00000464454 SLCO6A1Q86UG4 719 aa6.22□□□□□ -1.41
CLK1-208ENST00000464454 BTN2A2Q8WVV5 523 aa6.22□□□□□ -1.41
CLK1-208ENST00000464454 MCMBPQ9BTE3 642 aa6.22□□□□□ -1.41
CLK1-208ENST00000464454 OSBPL2Q9H1P3 480 aa6.22□□□□□ -1.41
CLK1-208ENST00000464454 SLC6A17Q9H1V8 727 aa6.22□□□□□ -1.41
CLK1-208ENST00000464454 C19orf44Q9H6X5 657 aa6.22□□□□□ -1.41
CLK1-208ENST00000464454 A0A1W2PQ27 194 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 A0A1W2PQ64 194 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 A0A1W2PQC6 194 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 A0A1W2PQD8 194 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 CCDC85CA6NKD9 419 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 CPP00450 1065 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 PAMP19021 973 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 SCRN1Q12765 414 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 HSP90AA2PQ14568 343 aaPredicted RBP6.21□□□□□ -1.42
CLK1-208ENST00000464454 NFE2L2Q16236 605 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 HSF5Q4G112 596 aaPredicted RBP6.21□□□□□ -1.42
CLK1-208ENST00000464454 MPZL3Q6UWV2 235 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 COPS5Q92905 334 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 DEPDC7Q96QD5 511 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 RNF32Q9H0A6 362 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 ZSWIM4Q9H7M6 989 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 CRTAC1Q9NQ79 661 aa6.21□□□□□ -1.42
CLK1-208ENST00000464454 A0A1W2PQU0 124 aa6.2□□□□□ -1.42
CLK1-208ENST00000464454 PSPNO60542 156 aa6.2□□□□□ -1.42
CLK1-208ENST00000464454 SCG5P05408 212 aa6.2□□□□□ -1.42
CLK1-208ENST00000464454 SNRPB2P08579 225 aaKnown RBP6.2□□□□□ -1.42
CLK1-208ENST00000464454 L1CAMP32004 1257 aa6.2□□□□□ -1.42
CLK1-208ENST00000464454 TRHRP34981 398 aaPredicted RBP6.2□□□□□ -1.42
CLK1-208ENST00000464454 ARL4AP40617 200 aa6.2□□□□□ -1.42
CLK1-208ENST00000464454 CORO7P57737 925 aa6.2□□□□□ -1.42
CLK1-208ENST00000464454 LAPTM5Q13571 262 aa6.2□□□□□ -1.42
CLK1-208ENST00000464454 TIGD5Q53EQ6 642 aa6.2□□□□□ -1.42
CLK1-208ENST00000464454 NOP9Q86U38 636 aaKnown RBP6.2□□□□□ -1.42
CLK1-208ENST00000464454 NLRX1Q86UT6 975 aa6.2□□□□□ -1.42
CLK1-208ENST00000464454 TMEM52Q8NDY8 209 aa6.2□□□□□ -1.42
CLK1-208ENST00000464454 SRPK1Q96SB4 655 aaKnown RBP6.2□□□□□ -1.42
CLK1-208ENST00000464454 AARSD1Q9BTE6 412 aaKnown RBP6.2□□□□□ -1.42
CLK1-208ENST00000464454 YBX2Q9Y2T7 364 aaKnown RBP6.2□□□□□ -1.42
CLK1-208ENST00000464454 CARMIL2Q6F5E8 1435 aa6.19□□□□□ -1.42
CLK1-208ENST00000464454 NPHP3-ACAD11A0A0J9YXS1 232 aa6.19□□□□□ -1.42
CLK1-208ENST00000464454 KCNJ6P48051 423 aa6.19□□□□□ -1.42
CLK1-208ENST00000464454 PPP2R2AP63151 447 aa6.19□□□□□ -1.42
CLK1-208ENST00000464454 RASA3Q14644 834 aa6.19□□□□□ -1.42
CLK1-208ENST00000464454 E4F1Q66K89 784 aaPredicted RBP6.19□□□□□ -1.42
CLK1-208ENST00000464454 IQCEQ6IPM2 695 aa6.19□□□□□ -1.42
CLK1-208ENST00000464454 IRF2BP1Q8IU81 584 aa6.19□□□□□ -1.42
CLK1-208ENST00000464454 JMJD8Q96S16 334 aa6.19□□□□□ -1.42
CLK1-208ENST00000464454 LGR4Q9BXB1 951 aa6.19□□□□□ -1.42
CLK1-208ENST00000464454 SNTG2Q9NY99 539 aa6.19□□□□□ -1.42
CLK1-208ENST00000464454 NOTOA8MTQ0 251 aa6.18□□□□□ -1.42
CLK1-208ENST00000464454 TBX1O43435 398 aa6.18□□□□□ -1.42
CLK1-208ENST00000464454 THBDP07204 575 aa6.18□□□□□ -1.42
CLK1-208ENST00000464454 PNLIPP16233 465 aa6.18□□□□□ -1.42
CLK1-208ENST00000464454 GFRA1P56159 465 aa6.18□□□□□ -1.42
CLK1-208ENST00000464454 SSRP1Q08945 709 aaKnown RBP6.18□□□□□ -1.42
CLK1-208ENST00000464454 MAP4K2Q12851 820 aa6.18□□□□□ -1.42
CLK1-208ENST00000464454 NUP43Q8NFH3 380 aa6.18□□□□□ -1.42
CLK1-208ENST00000464454 KCTD13Q8WZ19 329 aa6.18□□□□□ -1.42
CLK1-208ENST00000464454 SHISA4Q96DD7 197 aa6.18□□□□□ -1.42
CLK1-208ENST00000464454 INTS4Q96HW7 963 aaKnown RBP6.18□□□□□ -1.42
CLK1-208ENST00000464454 MMP19Q99542 508 aa6.18□□□□□ -1.42
CLK1-208ENST00000464454 SPATA9Q9BWV2 254 aa6.18□□□□□ -1.42
CLK1-208ENST00000464454 IMPACTQ9P2X3 320 aa6.18□□□□□ -1.42
CLK1-208ENST00000464454 ACSL6Q9UKU0 697 aa6.18□□□□□ -1.42
CLK1-208ENST00000464454 RNF114Q9Y508 228 aa6.18□□□□□ -1.42
CLK1-208ENST00000464454 TRAV20A0A0B4J274 112 aa6.17□□□□□ -1.42
CLK1-208ENST00000464454 A0A1W2PQJ5 194 aa6.17□□□□□ -1.42
CLK1-208ENST00000464454 ZNF503-AS2A6NEH8 195 aa6.17□□□□□ -1.42
CLK1-208ENST00000464454 FGFR1P11362 822 aa6.17□□□□□ -1.42
CLK1-208ENST00000464454 PLS3P13797 630 aa6.17□□□□□ -1.42
CLK1-208ENST00000464454 PRKCAP17252 672 aa6.17□□□□□ -1.42
CLK1-208ENST00000464454 ECI1P42126 302 aa6.17□□□□□ -1.42
CLK1-208ENST00000464454 CEBPAP49715 358 aaPredicted RBP6.17□□□□□ -1.42
CLK1-208ENST00000464454 CYP4F8P98187 520 aa6.17□□□□□ -1.42
CLK1-208ENST00000464454 KCNAB2Q13303 367 aa6.17□□□□□ -1.42
CLK1-208ENST00000464454 BMS1Q14692 1282 aaKnown RBP6.17□□□□□ -1.42
CLK1-208ENST00000464454 ACBD5Q5T8D3 534 aaPredicted RBP6.17□□□□□ -1.42
CLK1-208ENST00000464454 NLGN2Q8NFZ4 835 aa6.17□□□□□ -1.42
CLK1-208ENST00000464454 NPLOC4Q8TAT6 608 aa6.17□□□□□ -1.42
CLK1-208ENST00000464454 MRFAP1L1Q96HT8 127 aa6.17□□□□□ -1.42
CLK1-208ENST00000464454 PLCD4Q9BRC7 762 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms