RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 ABRAQ8N0Z2 381 aa21.98■■□□□ 1.11
LMNB1-204ENST00000463908 PIBF1Q8WXW3 757 aa21.98■■□□□ 1.11
LMNB1-204ENST00000463908 IVNS1ABPQ9Y6Y0 642 aa21.98■■□□□ 1.11
LMNB1-204ENST00000463908 NID2Q14112 1375 aa21.98■■□□□ 1.11
LMNB1-204ENST00000463908 PNMA6FA0A0J9YX94 578 aa21.97■■□□□ 1.11
LMNB1-204ENST00000463908 PPP2R5BQ15173 497 aa21.97■■□□□ 1.11
LMNB1-204ENST00000463908 NTRK3Q16288 839 aa21.97■■□□□ 1.11
LMNB1-204ENST00000463908 FBXO11Q86XK2 927 aa21.97■■□□□ 1.11
LMNB1-204ENST00000463908 NPLOC4Q8TAT6 608 aa21.97■■□□□ 1.11
LMNB1-204ENST00000463908 MMP19Q99542 508 aa21.97■■□□□ 1.11
LMNB1-204ENST00000463908 NCOA5Q9HCD5 579 aaKnown RBP21.97■■□□□ 1.11
LMNB1-204ENST00000463908 FBXO40Q9UH90 709 aa21.97■■□□□ 1.11
LMNB1-204ENST00000463908 SMCHD1A6NHR9 2005 aa21.96■■□□□ 1.11
LMNB1-204ENST00000463908 hCG_1642624A0A1W2PR95 340 aa21.96■■□□□ 1.11
LMNB1-204ENST00000463908 PGK2P07205 417 aa21.96■■□□□ 1.11
LMNB1-204ENST00000463908 HOXC6P09630 235 aa21.96■■□□□ 1.11
LMNB1-204ENST00000463908 XRCC5P13010 732 aaKnown RBP21.96■■□□□ 1.11
LMNB1-204ENST00000463908 USH1GQ495M9 461 aa21.96■■□□□ 1.11
LMNB1-204ENST00000463908 RAET1EQ8TD07 263 aa21.96■■□□□ 1.11
LMNB1-204ENST00000463908 SOCS4Q8WXH5 440 aa21.96■■□□□ 1.11
LMNB1-204ENST00000463908 AMNQ9BXJ7 453 aa21.96■■□□□ 1.11
LMNB1-204ENST00000463908 ACAD9Q9H845 621 aa21.96■■□□□ 1.11
LMNB1-204ENST00000463908 PNMA2Q9UL42 364 aa21.96■■□□□ 1.11
LMNB1-204ENST00000463908 DNAJC25-GNG10A0A024R161 153 aa21.95■■□□□ 1.1
LMNB1-204ENST00000463908 NFIBO00712 420 aa21.95■■□□□ 1.1
LMNB1-204ENST00000463908 RGS2P41220 211 aa21.95■■□□□ 1.1
LMNB1-204ENST00000463908 STK3Q13188 491 aa21.95■■□□□ 1.1
LMNB1-204ENST00000463908 KCTD2Q14681 263 aa21.95■■□□□ 1.1
LMNB1-204ENST00000463908 ANKRD1Q15327 319 aa21.95■■□□□ 1.1
LMNB1-204ENST00000463908 TBC1D5Q92609 795 aa21.95■■□□□ 1.1
LMNB1-204ENST00000463908 RRP36Q96EU6 259 aaKnown RBP21.95■■□□□ 1.1
LMNB1-204ENST00000463908 A1CFQ9NQ94 594 aaKnown RBP21.95■■□□□ 1.1
LMNB1-204ENST00000463908 V9GY48 417 aaPredicted RBP21.95■■□□□ 1.1
LMNB1-204ENST00000463908 CCDC196A0A1B0GTZ2 297 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 ADCY3O60266 1144 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 IGHA2P01877 340 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 ELNP15502 786 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 RABEP1Q15276 862 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 CCL14Q16627 93 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 ME3Q16798 604 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 ZNF792Q3KQV3 632 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 DPP9Q86TI2 863 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 ANKRD35Q8N283 1001 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 PXYLP1Q8TE99 480 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 FLRT1Q9NZU1 646 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 PCDHA1Q9Y5I3 950 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 ABCB11O95342 1321 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 CNTNAP5Q8WYK1 1306 aa21.94■■□□□ 1.1
LMNB1-204ENST00000463908 OPLAHO14841 1288 aa21.93■■□□□ 1.1
LMNB1-204ENST00000463908 PFKFB2O60825 505 aa21.93■■□□□ 1.1
LMNB1-204ENST00000463908 LARGE1O95461 756 aa21.93■■□□□ 1.1
LMNB1-204ENST00000463908 SOX10P56693 466 aa21.93■■□□□ 1.1
LMNB1-204ENST00000463908 NOL8Q76FK4 1167 aaKnown RBP21.93■■□□□ 1.1
LMNB1-204ENST00000463908 SH3TC2Q8TF17 1288 aa21.93■■□□□ 1.1
LMNB1-204ENST00000463908 DDX11Q96FC9 970 aa21.93■■□□□ 1.1
LMNB1-204ENST00000463908 BAZ2BQ9UIF8 2168 aaKnown RBP21.93■■□□□ 1.1
LMNB1-204ENST00000463908 GRK4P32298 578 aa21.92■■□□□ 1.1
LMNB1-204ENST00000463908 SCRN1Q12765 414 aa21.92■■□□□ 1.1
LMNB1-204ENST00000463908 BAATQ14032 418 aaPredicted RBP21.92■■□□□ 1.1
LMNB1-204ENST00000463908 RGS22Q8NE09 1264 aa21.92■■□□□ 1.1
LMNB1-204ENST00000463908 TRIB2Q92519 343 aa21.92■■□□□ 1.1
LMNB1-204ENST00000463908 PURBQ96QR8 312 aaKnown RBP21.92■■□□□ 1.1
LMNB1-204ENST00000463908 APBA2Q99767 749 aa21.92■■□□□ 1.1
LMNB1-204ENST00000463908 CYP39A1Q9NYL5 469 aa21.92■■□□□ 1.1
LMNB1-204ENST00000463908 MRPL11Q9Y3B7 192 aaKnown RBP21.92■■□□□ 1.1
LMNB1-204ENST00000463908 PPFIA3O75145 1194 aa21.91■■□□□ 1.1
LMNB1-204ENST00000463908 IFNAR1P17181 557 aa21.91■■□□□ 1.1
LMNB1-204ENST00000463908 CNTN2Q02246 1040 aa21.91■■□□□ 1.1
LMNB1-204ENST00000463908 TRIM32Q13049 653 aa21.91■■□□□ 1.1
LMNB1-204ENST00000463908 NSMFQ6X4W1 530 aa21.91■■□□□ 1.1
LMNB1-204ENST00000463908 FAM133AQ8N9E0 248 aa21.91■■□□□ 1.1
LMNB1-204ENST00000463908 FGD4Q96M96 766 aa21.91■■□□□ 1.1
LMNB1-204ENST00000463908 SLKQ9H2G2 1235 aaPredicted RBP21.91■■□□□ 1.1
LMNB1-204ENST00000463908 DIS3Q9Y2L1 958 aaKnown RBP21.91■■□□□ 1.1
LMNB1-204ENST00000463908 SOWAHBA6NEL2 793 aa21.9■■□□□ 1.1
LMNB1-204ENST00000463908 PRPF3O43395 683 aaKnown RBP21.9■■□□□ 1.1
LMNB1-204ENST00000463908 NECAB1Q8N987 351 aa21.9■■□□□ 1.1
LMNB1-204ENST00000463908 SLAIN1Q8ND83 568 aa21.9■■□□□ 1.1
LMNB1-204ENST00000463908 PHKBQ93100 1093 aa21.9■■□□□ 1.1
LMNB1-204ENST00000463908 MAML3Q96JK9 1138 aa21.9■■□□□ 1.1
LMNB1-204ENST00000463908 PCDH10Q9P2E7 1040 aa21.9■■□□□ 1.1
LMNB1-204ENST00000463908 SEC63Q9UGP8 760 aaKnown RBP21.9■■□□□ 1.1
LMNB1-204ENST00000463908 ZNFX1Q9P2E3 1918 aaKnown RBP21.89■■□□□ 1.09
LMNB1-204ENST00000463908 DTNBO60941 627 aa21.89■■□□□ 1.09
LMNB1-204ENST00000463908 RPS6P62753 249 aaKnown RBP21.89■■□□□ 1.09
LMNB1-204ENST00000463908 PKN1Q16512 942 aa21.89■■□□□ 1.09
LMNB1-204ENST00000463908 SLC9C1Q4G0N8 1177 aa21.89■■□□□ 1.09
LMNB1-204ENST00000463908 SLC30A10Q6XR72 485 aa21.89■■□□□ 1.09
LMNB1-204ENST00000463908 RNF207Q6ZRF8 634 aa21.89■■□□□ 1.09
LMNB1-204ENST00000463908 ARMC5Q96C12 935 aa21.89■■□□□ 1.09
LMNB1-204ENST00000463908 LIMCH1Q9UPQ0 1083 aa21.89■■□□□ 1.09
LMNB1-204ENST00000463908 ZNF236Q9UL36 1845 aa21.89■■□□□ 1.09
LMNB1-204ENST00000463908 ASTN1O14525 1302 aa21.88■■□□□ 1.09
LMNB1-204ENST00000463908 PFASO15067 1338 aa21.88■■□□□ 1.09
LMNB1-204ENST00000463908 PTPDC1A2A3K4 754 aa21.88■■□□□ 1.09
LMNB1-204ENST00000463908 POTEB2H3BUK9 544 aa21.88■■□□□ 1.09
LMNB1-204ENST00000463908 CD2BP2O95400 341 aaKnown RBP21.88■■□□□ 1.09
LMNB1-204ENST00000463908 CTDNEP1O95476 244 aa21.88■■□□□ 1.09
LMNB1-204ENST00000463908 ST3GAL1Q11201 340 aa21.88■■□□□ 1.09
LMNB1-204ENST00000463908 SLC5A4Q9NY91 659 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms