RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 LTBRP36941 435 aa16.39■□□□□ 0.21
C9orf3-211ENST00000463372 SEPT2Q15019 361 aa16.39■□□□□ 0.21
C9orf3-211ENST00000463372 TLK2Q86UE8 772 aa16.39■□□□□ 0.21
C9orf3-211ENST00000463372 A0A1W2PRG0 241 aa16.38■□□□□ 0.21
C9orf3-211ENST00000463372 VAMP4O75379 141 aa16.38■□□□□ 0.21
C9orf3-211ENST00000463372 PPP4CP60510 307 aa16.38■□□□□ 0.21
C9orf3-211ENST00000463372 DEFB103AP81534 67 aa16.38■□□□□ 0.21
C9orf3-211ENST00000463372 MKRN4PQ13434 485 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-211ENST00000463372 MVPQ14764 893 aaKnown RBP16.38■□□□□ 0.21
C9orf3-211ENST00000463372 NAA16Q6N069 864 aaPredicted RBP16.38■□□□□ 0.21
C9orf3-211ENST00000463372 SPATA5Q8NB90 893 aa16.38■□□□□ 0.21
C9orf3-211ENST00000463372 HMG20BQ9P0W2 317 aa16.38■□□□□ 0.21
C9orf3-211ENST00000463372 GUCY1A2P33402 732 aa16.37■□□□□ 0.21
C9orf3-211ENST00000463372 TIMM10P62072 90 aa16.37■□□□□ 0.21
C9orf3-211ENST00000463372 ARMCX2Q7L311 632 aa16.37■□□□□ 0.21
C9orf3-211ENST00000463372 SPICE1Q8N0Z3 855 aa16.37■□□□□ 0.21
C9orf3-211ENST00000463372 MAGEB6Q8N7X4 407 aa16.37■□□□□ 0.21
C9orf3-211ENST00000463372 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.37■□□□□ 0.21
C9orf3-211ENST00000463372 EHD4Q9H223 541 aa16.37■□□□□ 0.21
C9orf3-211ENST00000463372 ASTN1O14525 1302 aa16.37■□□□□ 0.21
C9orf3-211ENST00000463372 ATG2AQ2TAZ0 1938 aa16.37■□□□□ 0.21
C9orf3-211ENST00000463372 FRYLO94915 3013 aa16.36■□□□□ 0.21
C9orf3-211ENST00000463372 MPHOSPH10O00566 681 aaKnown RBP16.36■□□□□ 0.21
C9orf3-211ENST00000463372 IL15P40933 162 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-211ENST00000463372 BFSP2Q13515 415 aa16.36■□□□□ 0.21
C9orf3-211ENST00000463372 KIAA1755Q5JYT7 1200 aa16.36■□□□□ 0.21
C9orf3-211ENST00000463372 FAM117BQ6P1L5 589 aa16.36■□□□□ 0.21
C9orf3-211ENST00000463372 PI16Q6UXB8 463 aa16.36■□□□□ 0.21
C9orf3-211ENST00000463372 KIAA2013Q8IYS2 634 aa16.36■□□□□ 0.21
C9orf3-211ENST00000463372 CD207Q9UJ71 328 aa16.36■□□□□ 0.21
C9orf3-211ENST00000463372 ADAMTS5Q9UNA0 930 aa16.36■□□□□ 0.21
C9orf3-211ENST00000463372 MYH8P13535 1937 aa16.36■□□□□ 0.21
C9orf3-211ENST00000463372 MICAL3Q7RTP6 2002 aa16.35■□□□□ 0.21
C9orf3-211ENST00000463372 DNAJC25-GNG10A0A024R161 153 aa16.35■□□□□ 0.21
C9orf3-211ENST00000463372 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.35■□□□□ 0.21
C9orf3-211ENST00000463372 LOC730098B7Z3J9 87 aa16.35■□□□□ 0.21
C9orf3-211ENST00000463372 DYNC1LI2O43237 492 aaPredicted RBP16.35■□□□□ 0.21
C9orf3-211ENST00000463372 DLX2Q07687 328 aaPredicted RBP16.35■□□□□ 0.21
C9orf3-211ENST00000463372 GPM6BQ13491 265 aa16.35■□□□□ 0.21
C9orf3-211ENST00000463372 EPC2Q52LR7 807 aa16.35■□□□□ 0.21
C9orf3-211ENST00000463372 XAGE2Q96GT9 111 aa16.35■□□□□ 0.21
C9orf3-211ENST00000463372 SAMD11Q96NU1 681 aa16.35■□□□□ 0.21
C9orf3-211ENST00000463372 INSL6Q9Y581 213 aa16.35■□□□□ 0.21
C9orf3-211ENST00000463372 H3BNC9 293 aa16.34■□□□□ 0.21
C9orf3-211ENST00000463372 VWA5AO00534 786 aa16.34■□□□□ 0.21
C9orf3-211ENST00000463372 CTC1Q2NKJ3 1217 aa16.34■□□□□ 0.21
C9orf3-211ENST00000463372 LRRFIP1Q32MZ4 808 aaKnown RBP16.34■□□□□ 0.21
C9orf3-211ENST00000463372 FAM47CQ5HY64 1035 aa16.34■□□□□ 0.21
C9orf3-211ENST00000463372 TTC6Q86TZ1 520 aa16.34■□□□□ 0.21
C9orf3-211ENST00000463372 RIPOR3Q96MK2 946 aa16.34■□□□□ 0.21
C9orf3-211ENST00000463372 RALYQ9UKM9 306 aaKnown RBP16.34■□□□□ 0.21
C9orf3-211ENST00000463372 ZNF214Q9UL59 606 aaPredicted RBP16.34■□□□□ 0.21
C9orf3-211ENST00000463372 GNEQ9Y223 722 aaKnown RBP16.34■□□□□ 0.21
C9orf3-211ENST00000463372 GPR179Q6PRD1 2367 aa16.33■□□□□ 0.2
C9orf3-211ENST00000463372 WDR46O15213 610 aaKnown RBP16.33■□□□□ 0.2
C9orf3-211ENST00000463372 SHMT1P34896 483 aa16.33■□□□□ 0.2
C9orf3-211ENST00000463372 MCAMP43121 646 aa16.33■□□□□ 0.2
C9orf3-211ENST00000463372 CCDC144CPQ8IYA2 1237 aa16.33■□□□□ 0.2
C9orf3-211ENST00000463372 KCNG4Q8TDN1 519 aa16.33■□□□□ 0.2
C9orf3-211ENST00000463372 SH2D4AQ9H788 454 aa16.33■□□□□ 0.2
C9orf3-211ENST00000463372 RALGAPA2Q2PPJ7 1873 aa16.33■□□□□ 0.2
C9orf3-211ENST00000463372 MYO5AQ9Y4I1 1855 aaKnown RBP16.33■□□□□ 0.2
C9orf3-211ENST00000463372 SETXQ7Z333 2677 aaKnown RBP16.32■□□□□ 0.2
C9orf3-211ENST00000463372 ABHD14A-ACY1A0A1B0GW23 586 aa16.32■□□□□ 0.2
C9orf3-211ENST00000463372 EFCAB14O75071 495 aa16.32■□□□□ 0.2
C9orf3-211ENST00000463372 PDGFBP01127 241 aaPredicted RBP16.32■□□□□ 0.2
C9orf3-211ENST00000463372 USP5P45974 858 aa16.32■□□□□ 0.2
C9orf3-211ENST00000463372 CBX2Q14781 532 aaPredicted RBP16.32■□□□□ 0.2
C9orf3-211ENST00000463372 GORABQ5T7V8 394 aa16.32■□□□□ 0.2
C9orf3-211ENST00000463372 CNKSR3Q6P9H4 555 aa16.32■□□□□ 0.2
C9orf3-211ENST00000463372 ARHGEF10LQ9HCE6 1279 aa16.32■□□□□ 0.2
C9orf3-211ENST00000463372 DLL3Q9NYJ7 618 aa16.32■□□□□ 0.2
C9orf3-211ENST00000463372 NOD1Q9Y239 953 aa16.32■□□□□ 0.2
C9orf3-211ENST00000463372 NAV1Q8NEY1 1877 aa16.31■□□□□ 0.2
C9orf3-211ENST00000463372 SNRNP48Q6IEG0 339 aaKnown RBP16.31■□□□□ 0.2
C9orf3-211ENST00000463372 ADGRA1Q86SQ6 560 aa16.31■□□□□ 0.2
C9orf3-211ENST00000463372 TEX13BQ9BXU2 312 aa16.31■□□□□ 0.2
C9orf3-211ENST00000463372 KATNBL1Q9H079 304 aa16.31■□□□□ 0.2
C9orf3-211ENST00000463372 VCPKMTQ9H867 229 aa16.31■□□□□ 0.2
C9orf3-211ENST00000463372 AKAP2Q9Y2D5 859 aa16.31■□□□□ 0.2
C9orf3-211ENST00000463372 SCN10AQ9Y5Y9 1956 aa16.31■□□□□ 0.2
C9orf3-211ENST00000463372 FANCIQ9NVI1 1328 aa16.3■□□□□ 0.2
C9orf3-211ENST00000463372 TBX10O75333 385 aa16.3■□□□□ 0.2
C9orf3-211ENST00000463372 SLC4A3P48751 1232 aa16.3■□□□□ 0.2
C9orf3-211ENST00000463372 ANKRD35Q8N283 1001 aa16.3■□□□□ 0.2
C9orf3-211ENST00000463372 CCDC155Q8N6L0 562 aa16.3■□□□□ 0.2
C9orf3-211ENST00000463372 TMEM105Q8N8V8 129 aa16.3■□□□□ 0.2
C9orf3-211ENST00000463372 CCER1Q8TC90 406 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-211ENST00000463372 CHAMP1Q96JM3 812 aa16.3■□□□□ 0.2
C9orf3-211ENST00000463372 NEUROD6Q96NK8 337 aa16.3■□□□□ 0.2
C9orf3-211ENST00000463372 FBXO28Q9NVF7 368 aa16.3■□□□□ 0.2
C9orf3-211ENST00000463372 POLR3EQ9NVU0 708 aa16.3■□□□□ 0.2
C9orf3-211ENST00000463372 PPP1R9AQ9ULJ8 1098 aa16.3■□□□□ 0.2
C9orf3-211ENST00000463372 MYO10Q9HD67 2058 aa16.3■□□□□ 0.2
C9orf3-211ENST00000463372 SMPD1P17405 629 aa16.29■□□□□ 0.2
C9orf3-211ENST00000463372 ICAM3P32942 547 aa16.29■□□□□ 0.2
C9orf3-211ENST00000463372 HYAL1Q12794 435 aa16.29■□□□□ 0.2
C9orf3-211ENST00000463372 IKBKEQ14164 716 aa16.29■□□□□ 0.2
C9orf3-211ENST00000463372 PTPN21Q16825 1174 aa16.29■□□□□ 0.2
C9orf3-211ENST00000463372 ZBTB33Q86T24 672 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms