RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 CNPY2Q9Y2B0 182 aa21.96■■□□□ 1.11
COL9A3-203ENST00000462700 SOWAHBA6NEL2 793 aa21.95■■□□□ 1.1
COL9A3-203ENST00000462700 REC8O95072 547 aa21.95■■□□□ 1.1
COL9A3-203ENST00000462700 ZNF865P0CJ78 1059 aaPredicted RBP21.95■■□□□ 1.1
COL9A3-203ENST00000462700 QRICH1Q2TAL8 776 aa21.95■■□□□ 1.1
COL9A3-203ENST00000462700 USH1GQ495M9 461 aa21.95■■□□□ 1.1
COL9A3-203ENST00000462700 NECAB2Q7Z6G3 386 aa21.95■■□□□ 1.1
COL9A3-203ENST00000462700 ZNF654Q8IZM8 581 aa21.95■■□□□ 1.1
COL9A3-203ENST00000462700 VAT1LQ9HCJ6 419 aa21.95■■□□□ 1.1
COL9A3-203ENST00000462700 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.95■■□□□ 1.1
COL9A3-203ENST00000462700 DDAH1O94760 285 aa21.94■■□□□ 1.1
COL9A3-203ENST00000462700 LIFRP42702 1097 aa21.94■■□□□ 1.1
COL9A3-203ENST00000462700 BAATQ14032 418 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-203ENST00000462700 KRT32Q14532 448 aa21.94■■□□□ 1.1
COL9A3-203ENST00000462700 ADCK5Q3MIX3 580 aa21.94■■□□□ 1.1
COL9A3-203ENST00000462700 ANO1Q5XXA6 986 aa21.94■■□□□ 1.1
COL9A3-203ENST00000462700 ARMCX2Q7L311 632 aa21.94■■□□□ 1.1
COL9A3-203ENST00000462700 CCDC144CPQ8IYA2 1237 aa21.94■■□□□ 1.1
COL9A3-203ENST00000462700 TMTC2Q8N394 836 aa21.94■■□□□ 1.1
COL9A3-203ENST00000462700 HTATIP2Q9BUP3 242 aa21.94■■□□□ 1.1
COL9A3-203ENST00000462700 PTPDC1A2A3K4 754 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 CCDC69A6NI79 296 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 ASTN1O14525 1302 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 ABCB11O95342 1321 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 HSPA4P34932 840 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 SLC35G1Q2M3R5 365 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 FRMPD3Q5JV73 1810 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 SLC30A10Q6XR72 485 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 NFXL1Q6ZNB6 911 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 FBXO11Q86XK2 927 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 NUP133Q8WUM0 1156 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 KCNB2Q92953 911 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 MTMR8Q96EF0 704 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 MAP3K14Q99558 947 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 MYL10Q9BUA6 226 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 LRRC2Q9BYS8 371 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 C11orf49Q9H6J7 331 aa21.93■■□□□ 1.1
COL9A3-203ENST00000462700 ZHX1Q9UKY1 873 aaPredicted RBP21.93■■□□□ 1.1
COL9A3-203ENST00000462700 ASB14A6NK59 587 aa21.92■■□□□ 1.1
COL9A3-203ENST00000462700 AKR1A1P14550 325 aa21.92■■□□□ 1.1
COL9A3-203ENST00000462700 ACVR2BQ13705 512 aa21.92■■□□□ 1.1
COL9A3-203ENST00000462700 RNF207Q6ZRF8 634 aa21.92■■□□□ 1.1
COL9A3-203ENST00000462700 PURBQ96QR8 312 aaKnown RBP21.92■■□□□ 1.1
COL9A3-203ENST00000462700 ABHD16BQ9H3Z7 469 aa21.92■■□□□ 1.1
COL9A3-203ENST00000462700 RIOX1Q9H6W3 641 aa21.92■■□□□ 1.1
COL9A3-203ENST00000462700 ZBTB5O15062 677 aa21.91■■□□□ 1.1
COL9A3-203ENST00000462700 EXOSC10Q01780 885 aaKnown RBP21.91■■□□□ 1.1
COL9A3-203ENST00000462700 PRPF38BQ5VTL8 546 aaKnown RBP21.91■■□□□ 1.1
COL9A3-203ENST00000462700 DHX32Q7L7V1 743 aaKnown RBP21.91■■□□□ 1.1
COL9A3-203ENST00000462700 RGS22Q8NE09 1264 aa21.91■■□□□ 1.1
COL9A3-203ENST00000462700 CTCFLQ8NI51 663 aaPredicted RBP21.91■■□□□ 1.1
COL9A3-203ENST00000462700 DNM1LO00429 736 aa21.9■■□□□ 1.1
COL9A3-203ENST00000462700 EPB41L2O43491 1005 aaKnown RBP21.9■■□□□ 1.1
COL9A3-203ENST00000462700 CYTH3O43739 400 aa21.9■■□□□ 1.1
COL9A3-203ENST00000462700 RARBP10826 455 aa21.9■■□□□ 1.1
COL9A3-203ENST00000462700 COL6A1P12109 1028 aa21.9■■□□□ 1.1
COL9A3-203ENST00000462700 CALML3P27482 149 aa21.9■■□□□ 1.1
COL9A3-203ENST00000462700 KIF5BP33176 963 aa21.9■■□□□ 1.1
COL9A3-203ENST00000462700 RPS6P62753 249 aaKnown RBP21.9■■□□□ 1.1
COL9A3-203ENST00000462700 SGMS1Q86VZ5 419 aa21.9■■□□□ 1.1
COL9A3-203ENST00000462700 DPF3Q92784 378 aa21.9■■□□□ 1.1
COL9A3-203ENST00000462700 AMNQ9BXJ7 453 aa21.9■■□□□ 1.1
COL9A3-203ENST00000462700 KATNBL1Q9H079 304 aa21.9■■□□□ 1.1
COL9A3-203ENST00000462700 FAM184BQ9ULE4 1060 aa21.9■■□□□ 1.1
COL9A3-203ENST00000462700 SNX14Q9Y5W7 946 aa21.9■■□□□ 1.1
COL9A3-203ENST00000462700 PPP1R11O60927 126 aaPredicted RBP21.89■■□□□ 1.09
COL9A3-203ENST00000462700 HMGB1P09429 215 aaKnown RBP21.89■■□□□ 1.09
COL9A3-203ENST00000462700 CALM1P0DP23 149 aa21.89■■□□□ 1.09
COL9A3-203ENST00000462700 CALM2P0DP24 149 aa21.89■■□□□ 1.09
COL9A3-203ENST00000462700 CALM3P0DP25 149 aa21.89■■□□□ 1.09
COL9A3-203ENST00000462700 ALDH5A1P51649 535 aaPredicted RBP21.89■■□□□ 1.09
COL9A3-203ENST00000462700 HOMER1Q86YM7 354 aa21.89■■□□□ 1.09
COL9A3-203ENST00000462700 ARRDC4Q8NCT1 418 aa21.89■■□□□ 1.09
COL9A3-203ENST00000462700 TCEANC2Q96MN5 208 aa21.89■■□□□ 1.09
COL9A3-203ENST00000462700 PIGSQ96S52 555 aa21.89■■□□□ 1.09
COL9A3-203ENST00000462700 MAF1Q9H063 256 aa21.89■■□□□ 1.09
COL9A3-203ENST00000462700 XPNPEP3Q9NQH7 507 aa21.89■■□□□ 1.09
COL9A3-203ENST00000462700 ADD3Q9UEY8 706 aaKnown RBP21.89■■□□□ 1.09
COL9A3-203ENST00000462700 MRPL11Q9Y3B7 192 aaKnown RBP21.89■■□□□ 1.09
COL9A3-203ENST00000462700 SLC12A7Q9Y666 1083 aa21.89■■□□□ 1.09
COL9A3-203ENST00000462700 SMCHD1A6NHR9 2005 aa21.89■■□□□ 1.09
COL9A3-203ENST00000462700 LCTP09848 1927 aa21.88■■□□□ 1.09
COL9A3-203ENST00000462700 LOC102724159A0A0B4J2E5 919 aa21.88■■□□□ 1.09
COL9A3-203ENST00000462700 PWP2Q15269 919 aaKnown RBP21.88■■□□□ 1.09
COL9A3-203ENST00000462700 GJC2Q5T442 439 aaPredicted RBP21.88■■□□□ 1.09
COL9A3-203ENST00000462700 MORC4Q8TE76 937 aa21.88■■□□□ 1.09
COL9A3-203ENST00000462700 LENG1Q96BZ8 264 aaPredicted RBP21.88■■□□□ 1.09
COL9A3-203ENST00000462700 DDX49Q9Y6V7 483 aaKnown RBP21.88■■□□□ 1.09
COL9A3-203ENST00000462700 RXRAP19793 462 aa21.87■■□□□ 1.09
COL9A3-203ENST00000462700 LRRC41Q15345 812 aa21.87■■□□□ 1.09
COL9A3-203ENST00000462700 CCDC144BQ3MJ40 725 aa21.87■■□□□ 1.09
COL9A3-203ENST00000462700 MCF2L2Q86YR7 1114 aa21.87■■□□□ 1.09
COL9A3-203ENST00000462700 JAKMIP1Q96N16 626 aaKnown RBP21.87■■□□□ 1.09
COL9A3-203ENST00000462700 SPZ1Q9BXG8 430 aa21.87■■□□□ 1.09
COL9A3-203ENST00000462700 LRRC37A2A6NM11 1700 aa21.86■■□□□ 1.09
COL9A3-203ENST00000462700 PNMA6FA0A0J9YX94 578 aa21.86■■□□□ 1.09
COL9A3-203ENST00000462700 KBTBD13C9JR72 458 aa21.86■■□□□ 1.09
COL9A3-203ENST00000462700 GNAQP50148 359 aa21.86■■□□□ 1.09
COL9A3-203ENST00000462700 RAB11FIP4Q86YS3 637 aa21.86■■□□□ 1.09
COL9A3-203ENST00000462700 DNERQ8NFT8 737 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms