RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 MUM1L1Q5H9M0 696 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 MORN1Q5T089 497 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.65□□□□□ -0.22
CPNE1-221ENST00000462352 NECAB1Q8N987 351 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 PHKBQ93100 1093 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 GTF3C6Q969F1 213 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 ZSCAN31Q96LW9 406 aaPredicted RBP13.65□□□□□ -0.22
CPNE1-221ENST00000462352 SRRDQ9UH36 339 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 GJD2Q9UKL4 321 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 GABRQQ9UN88 632 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 PCDHA1Q9Y5I3 950 aa13.65□□□□□ -0.22
CPNE1-221ENST00000462352 V9GY48 417 aaPredicted RBP13.65□□□□□ -0.22
CPNE1-221ENST00000462352 ABCB11O95342 1321 aa13.64□□□□□ -0.23
CPNE1-221ENST00000462352 SLC15A5A6NIM6 579 aa13.64□□□□□ -0.23
CPNE1-221ENST00000462352 PPFIA3O75145 1194 aa13.64□□□□□ -0.23
CPNE1-221ENST00000462352 ADORA2AP29274 412 aa13.64□□□□□ -0.23
CPNE1-221ENST00000462352 TRAF1Q13077 416 aa13.64□□□□□ -0.23
CPNE1-221ENST00000462352 KCTD2Q14681 263 aa13.64□□□□□ -0.23
CPNE1-221ENST00000462352 CPLX2Q6PUV4 134 aaKnown RBP13.64□□□□□ -0.23
CPNE1-221ENST00000462352 ABRAQ8N0Z2 381 aa13.64□□□□□ -0.23
CPNE1-221ENST00000462352 SOCS4Q8WXH5 440 aa13.64□□□□□ -0.23
CPNE1-221ENST00000462352 CLEC4DQ8WXI8 215 aa13.64□□□□□ -0.23
CPNE1-221ENST00000462352 MMP19Q99542 508 aa13.64□□□□□ -0.23
CPNE1-221ENST00000462352 NUDT12Q9BQG2 462 aa13.64□□□□□ -0.23
CPNE1-221ENST00000462352 SLC26A6Q9BXS9 759 aa13.64□□□□□ -0.23
CPNE1-221ENST00000462352 SMCHD1A6NHR9 2005 aa13.63□□□□□ -0.23
CPNE1-221ENST00000462352 PLXNB2O15031 1838 aa13.63□□□□□ -0.23
CPNE1-221ENST00000462352 NFIBO00712 420 aa13.63□□□□□ -0.23
CPNE1-221ENST00000462352 PRPF3O43395 683 aaKnown RBP13.63□□□□□ -0.23
CPNE1-221ENST00000462352 MCM2P49736 904 aa13.63□□□□□ -0.23
CPNE1-221ENST00000462352 FLT3LGP49771 235 aa13.63□□□□□ -0.23
CPNE1-221ENST00000462352 PRMT2P55345 433 aa13.63□□□□□ -0.23
CPNE1-221ENST00000462352 ST3GAL1Q11201 340 aa13.63□□□□□ -0.23
CPNE1-221ENST00000462352 MAP2K5Q13163 448 aa13.63□□□□□ -0.23
CPNE1-221ENST00000462352 ANKRD35Q8N283 1001 aa13.63□□□□□ -0.23
CPNE1-221ENST00000462352 USP6NLQ92738 828 aa13.63□□□□□ -0.23
CPNE1-221ENST00000462352 RNF26Q9BY78 433 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-221ENST00000462352 A1CFQ9NQ94 594 aaKnown RBP13.63□□□□□ -0.23
CPNE1-221ENST00000462352 SH2B1Q9NRF2 756 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-221ENST00000462352 MRPL11Q9Y3B7 192 aaKnown RBP13.63□□□□□ -0.23
CPNE1-221ENST00000462352 MYH6P13533 1939 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 CDKL5O76039 1030 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 CTDNEP1O95476 244 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 PGK2P07205 417 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 CYP2B6P20813 491 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 RGS2P41220 211 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 AKAP17AQ02040 695 aaKnown RBP13.62□□□□□ -0.23
CPNE1-221ENST00000462352 SSRP1Q08945 709 aaKnown RBP13.62□□□□□ -0.23
CPNE1-221ENST00000462352 PKN1Q16512 942 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 PFKFB3Q16875 520 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-221ENST00000462352 WWC2Q6AWC2 1192 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 NSMFQ6X4W1 530 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 HEATR3Q7Z4Q2 680 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 CCDC83Q8IWF9 413 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 TRIM22Q8IYM9 498 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 GPKOWQ92917 476 aaPredicted RBP eCLIP13.62□□□□□ -0.23
CPNE1-221ENST00000462352 DDX11Q96FC9 970 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 RBM27Q9P2N5 1060 aaKnown RBP13.62□□□□□ -0.23
CPNE1-221ENST00000462352 PTPN22Q9Y2R2 807 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 DOCK3Q8IZD9 2030 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 ZNF236Q9UL36 1845 aa13.62□□□□□ -0.23
CPNE1-221ENST00000462352 hCG_1984214I3L0E3 225 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 OPLAHO14841 1288 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 DTNBO60941 627 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 COBLO75128 1261 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 SCG2P13521 617 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 IRF5Q13568 498 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 DPP9Q86TI2 863 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 MCF2L2Q86YR7 1114 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 ZNF713Q8N859 430 aaPredicted RBP13.61□□□□□ -0.23
CPNE1-221ENST00000462352 RGS22Q8NE09 1264 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 NSUN7Q8NE18 718 aaKnown RBP13.61□□□□□ -0.23
CPNE1-221ENST00000462352 RAET1EQ8TD07 263 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 TBC1D5Q92609 795 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 TMX3Q96JJ7 454 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 CYP39A1Q9NYL5 469 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 PTCH2Q9Y6C5 1203 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 PFASO15067 1338 aa13.61□□□□□ -0.23
CPNE1-221ENST00000462352 DNAJC25-GNG10A0A024R161 153 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 PTPDC1A2A3K4 754 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 POTEB2H3BUK9 544 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 DEXIO95424 95 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 HOXC6P09630 235 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 BAATQ14032 418 aaPredicted RBP13.6□□□□□ -0.23
CPNE1-221ENST00000462352 PKN2Q16513 984 aaKnown RBP13.6□□□□□ -0.23
CPNE1-221ENST00000462352 ZNF792Q3KQV3 632 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 TYW1BQ6NUM6 668 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 FBXO46Q6PJ61 603 aaPredicted RBP13.6□□□□□ -0.23
CPNE1-221ENST00000462352 SLC30A10Q6XR72 485 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 RNF207Q6ZRF8 634 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 NPLOC4Q8TAT6 608 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 APBA2Q99767 749 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 MAF1Q9H063 256 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 BARHL2Q9NY43 387 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 SLC5A4Q9NY91 659 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 STK36Q9NRP7 1315 aa13.6□□□□□ -0.23
CPNE1-221ENST00000462352 STXBP3O00186 592 aa13.59□□□□□ -0.23
CPNE1-221ENST00000462352 JAK2O60674 1132 aa13.59□□□□□ -0.23
CPNE1-221ENST00000462352 CFBP00751 764 aa13.59□□□□□ -0.23
CPNE1-221ENST00000462352 XRCC5P13010 732 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms