RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 DDRGK1Q96HY6 314 aa18.32■□□□□ 0.52
APP-211ENST00000462267 UIMC1Q96RL1 719 aa18.32■□□□□ 0.52
APP-211ENST00000462267 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.32■□□□□ 0.52
APP-211ENST00000462267 NYAP2Q9P242 653 aa18.32■□□□□ 0.52
APP-211ENST00000462267 TNNQ9UQP3 1299 aa18.32■□□□□ 0.52
APP-211ENST00000462267 CYP2C9P11712 490 aa18.31■□□□□ 0.52
APP-211ENST00000462267 CNTN2Q02246 1040 aa18.31■□□□□ 0.52
APP-211ENST00000462267 CSPP1Q1MSJ5 1256 aa18.31■□□□□ 0.52
APP-211ENST00000462267 ERC1Q8IUD2 1116 aa18.31■□□□□ 0.52
APP-211ENST00000462267 FRAT1Q92837 279 aaPredicted RBP18.31■□□□□ 0.52
APP-211ENST00000462267 KIFC2Q96AC6 838 aa18.31■□□□□ 0.52
APP-211ENST00000462267 TNKSO95271 1327 aa18.3■□□□□ 0.52
APP-211ENST00000462267 GOLIM4O00461 696 aa18.3■□□□□ 0.52
APP-211ENST00000462267 MBD4O95243 580 aa18.3■□□□□ 0.52
APP-211ENST00000462267 LEXMQ3ZCV2 418 aa18.3■□□□□ 0.52
APP-211ENST00000462267 TMEM57Q8N5G2 664 aa18.3■□□□□ 0.52
APP-211ENST00000462267 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.3■□□□□ 0.52
APP-211ENST00000462267 UBE2ZQ9H832 354 aaPredicted RBP18.3■□□□□ 0.52
APP-211ENST00000462267 TRMT13Q9NUP7 481 aaKnown RBP18.3■□□□□ 0.52
APP-211ENST00000462267 FEM1BQ9UK73 627 aa18.3■□□□□ 0.52
APP-211ENST00000462267 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.29■□□□□ 0.52
APP-211ENST00000462267 FDX1P10109 184 aa18.29■□□□□ 0.52
APP-211ENST00000462267 ACAD9Q9H845 621 aa18.29■□□□□ 0.52
APP-211ENST00000462267 SOWAHBA6NEL2 793 aa18.28■□□□□ 0.52
APP-211ENST00000462267 PITPNM1O00562 1244 aa18.28■□□□□ 0.52
APP-211ENST00000462267 BAIAP3O94812 1187 aa18.28■□□□□ 0.52
APP-211ENST00000462267 SSTR3P32745 418 aaPredicted RBP18.28■□□□□ 0.52
APP-211ENST00000462267 RETREG2Q8NC44 543 aa18.28■□□□□ 0.52
APP-211ENST00000462267 FBXL18Q96ME1 805 aa18.28■□□□□ 0.52
APP-211ENST00000462267 DNAJC2Q99543 621 aaKnown RBP18.28■□□□□ 0.52
APP-211ENST00000462267 FTOQ9C0B1 505 aaKnown RBP eCLIP18.28■□□□□ 0.52
APP-211ENST00000462267 C1orf115Q9H7X2 142 aa18.28■□□□□ 0.52
APP-211ENST00000462267 A1CFQ9NQ94 594 aaKnown RBP18.28■□□□□ 0.52
APP-211ENST00000462267 HOMER2Q9NSB8 354 aa18.28■□□□□ 0.52
APP-211ENST00000462267 POLR3EQ9NVU0 708 aa18.28■□□□□ 0.52
APP-211ENST00000462267 COG6Q9Y2V7 657 aa18.28■□□□□ 0.52
APP-211ENST00000462267 IQCF3P0C7M6 154 aa18.27■□□□□ 0.52
APP-211ENST00000462267 PTGS1P23219 599 aa18.27■□□□□ 0.52
APP-211ENST00000462267 ADD2P35612 726 aa18.27■□□□□ 0.52
APP-211ENST00000462267 TAPT1Q6NXT6 567 aa18.27■□□□□ 0.52
APP-211ENST00000462267 CTR9Q6PD62 1173 aa18.27■□□□□ 0.52
APP-211ENST00000462267 PDGFCQ9NRA1 345 aa18.27■□□□□ 0.52
APP-211ENST00000462267 BAZ2AQ9UIF9 1905 aaKnown RBP18.27■□□□□ 0.51
APP-211ENST00000462267 ZBED9Q6R2W3 1325 aa18.26■□□□□ 0.51
APP-211ENST00000462267 SPRED2Q7Z698 418 aa18.26■□□□□ 0.51
APP-211ENST00000462267 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.26■□□□□ 0.51
APP-211ENST00000462267 CLIP2Q9UDT6 1046 aa18.26■□□□□ 0.51
APP-211ENST00000462267 SYNPO2Q9UMS6 1093 aa18.26■□□□□ 0.51
APP-211ENST00000462267 RASA1P20936 1047 aa18.25■□□□□ 0.51
APP-211ENST00000462267 KCNJ6P48051 423 aa18.25■□□□□ 0.51
APP-211ENST00000462267 TKFCQ3LXA3 575 aa18.25■□□□□ 0.51
APP-211ENST00000462267 PUS10Q3MIT2 529 aaKnown RBP18.25■□□□□ 0.51
APP-211ENST00000462267 FBXO16Q8IX29 292 aaPredicted RBP18.25■□□□□ 0.51
APP-211ENST00000462267 RPAP2Q8IXW5 612 aaPredicted RBP18.25■□□□□ 0.51
APP-211ENST00000462267 GDPD5Q8WTR4 605 aa18.25■□□□□ 0.51
APP-211ENST00000462267 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.25■□□□□ 0.51
APP-211ENST00000462267 VTA1Q9NP79 307 aa18.25■□□□□ 0.51
APP-211ENST00000462267 RNF146Q9NTX7 359 aa18.25■□□□□ 0.51
APP-211ENST00000462267 ARPP21Q9UBL0 812 aaPredicted RBP18.25■□□□□ 0.51
APP-211ENST00000462267 SLC4A4Q9Y6R1 1079 aa18.25■□□□□ 0.51
APP-211ENST00000462267 SCN5AQ14524 2016 aa18.25■□□□□ 0.51
APP-211ENST00000462267 ZNF536O15090 1300 aa18.24■□□□□ 0.51
APP-211ENST00000462267 GREB1LQ9C091 1923 aaPredicted RBP18.24■□□□□ 0.51
APP-211ENST00000462267 DCXO43602 365 aa18.24■□□□□ 0.51
APP-211ENST00000462267 KCNA5P22460 613 aa18.24■□□□□ 0.51
APP-211ENST00000462267 PURAQ00577 322 aaKnown RBP18.24■□□□□ 0.51
APP-211ENST00000462267 BFSP2Q13515 415 aa18.24■□□□□ 0.51
APP-211ENST00000462267 DUSP28Q4G0W2 176 aa18.24■□□□□ 0.51
APP-211ENST00000462267 HSP90AB4PQ58FF6 505 aa18.24■□□□□ 0.51
APP-211ENST00000462267 TMEM63BQ5T3F8 832 aa18.24■□□□□ 0.51
APP-211ENST00000462267 PTCRAQ6ISU1 281 aaPredicted RBP18.24■□□□□ 0.51
APP-211ENST00000462267 KIAA1211Q6ZU35 1233 aa18.24■□□□□ 0.51
APP-211ENST00000462267 EEPD1Q7L9B9 569 aa18.24■□□□□ 0.51
APP-211ENST00000462267 MKL1Q969V6 931 aa18.24■□□□□ 0.51
APP-211ENST00000462267 ZBED2Q9BTP6 218 aa18.24■□□□□ 0.51
APP-211ENST00000462267 SUGCTQ9HAC7 445 aa18.24■□□□□ 0.51
APP-211ENST00000462267 MKNK2Q9HBH9 465 aa18.24■□□□□ 0.51
APP-211ENST00000462267 IL1RAPL2Q9NP60 686 aa18.24■□□□□ 0.51
APP-211ENST00000462267 EXOC6BQ9Y2D4 811 aa18.24■□□□□ 0.51
APP-211ENST00000462267 POTEB3A0JP26 581 aa18.23■□□□□ 0.51
APP-211ENST00000462267 LCHNA4D1U4 455 aa18.23■□□□□ 0.51
APP-211ENST00000462267 IL9P15248 144 aa18.23■□□□□ 0.51
APP-211ENST00000462267 CPT1AP50416 773 aa18.23■□□□□ 0.51
APP-211ENST00000462267 SLFNL1Q499Z3 407 aa18.23■□□□□ 0.51
APP-211ENST00000462267 FAM47CQ5HY64 1035 aa18.23■□□□□ 0.51
APP-211ENST00000462267 ZKSCAN2Q63HK3 967 aa18.23■□□□□ 0.51
APP-211ENST00000462267 NFRKBQ6P4R8 1299 aa18.23■□□□□ 0.51
APP-211ENST00000462267 POTEBQ6S5H4 581 aa18.23■□□□□ 0.51
APP-211ENST00000462267 GMCL1P1Q8NEA9 526 aa18.23■□□□□ 0.51
APP-211ENST00000462267 MTG1Q9BT17 334 aaPredicted RBP18.23■□□□□ 0.51
APP-211ENST00000462267 GPHNQ9NQX3 736 aaPredicted RBP18.23■□□□□ 0.51
APP-211ENST00000462267 PAG1Q9NWQ8 432 aa18.23■□□□□ 0.51
APP-211ENST00000462267 COL4A4P53420 1690 aaPredicted RBP18.22■□□□□ 0.51
APP-211ENST00000462267 IGKV6D-41A0A0C4DH26 115 aa18.22■□□□□ 0.51
APP-211ENST00000462267 GRXCR2A6NFK2 248 aa18.22■□□□□ 0.51
APP-211ENST00000462267 ERVK-21P61565 698 aa18.22■□□□□ 0.51
APP-211ENST00000462267 WDR5P61964 334 aaKnown RBP18.22■□□□□ 0.51
APP-211ENST00000462267 PTPN11Q06124 597 aaPredicted RBP18.22■□□□□ 0.51
APP-211ENST00000462267 UBE3CQ15386 1083 aa18.22■□□□□ 0.51
APP-211ENST00000462267 LRRFIP1Q32MZ4 808 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms